Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte12e02
         (550 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.         25   2.2  
AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative odorant-b...    23   5.0  
AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical prote...    23   5.0  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   8.8  
AY344840-1|AAR05811.1|  221|Anopheles gambiae TEP4 protein.            23   8.8  
AY344839-1|AAR05810.1|  221|Anopheles gambiae TEP4 protein.            23   8.8  
AY344838-1|AAR05809.1|  221|Anopheles gambiae TEP4 protein.            23   8.8  
AY344837-1|AAR05808.1|  221|Anopheles gambiae TEP4 protein.            23   8.8  
AY344836-1|AAR05807.1|  221|Anopheles gambiae TEP4 protein.            23   8.8  

>AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.
          Length = 190

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 304 VAFLSDYKRSRPNTTLHCLLLSVALHR 384
           +A L   +RSR N  + CL +  A++R
Sbjct: 137 IALLQKNRRSRRNMGVECLTIGFAVYR 163


>AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative
           odorant-binding protein OBPjj17 protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 12/56 (21%), Positives = 21/56 (37%)
 Frame = -1

Query: 370 QIVRDNVELCLGGNAYSHSRTPQWITIITEKTLARLNKLNKPYKYIMRITITQKNG 203
           +I  D    C+    + H     WI   + +T+  L     PYK +  + +    G
Sbjct: 159 EIAEDIFGDCVQAQMFMHCPRATWIESRSCQTMRELLATGCPYKTLGEVVVLNDEG 214


>AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical protein
           protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 38  SSYIKNNVIRRGFLYLKSKRPYIHNAIHVLIFPTHCA 148
           S YIK +     F   +   P  HN I +++ P  CA
Sbjct: 83  SPYIKQDKKDITFSTTQDNFPTPHNRITIVLLPIFCA 119


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 12/58 (20%), Positives = 23/58 (39%)
 Frame = -1

Query: 298  ITIITEKTLARLNKLNKPYKYIMRITITQKNGSGLHTAAAYYWDIATDGTCTVRWENK 125
            I ++ E+      ++N P + I +  I  +      T     WD   D +   RW ++
Sbjct: 906  ICLLIEEDARVFERVNDPGRSITKAAIRLEERQRTITMWQSQWDAEADTSRYTRWTHR 963


>AY344840-1|AAR05811.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 209 LLSYGNSHDIF 241
           LL Y N+HDIF
Sbjct: 45  LLQYSNNHDIF 55


>AY344839-1|AAR05810.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 209 LLSYGNSHDIF 241
           LL Y N+HDIF
Sbjct: 45  LLQYSNNHDIF 55


>AY344838-1|AAR05809.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 209 LLSYGNSHDIF 241
           LL Y N+HDIF
Sbjct: 45  LLQYSNNHDIF 55


>AY344837-1|AAR05808.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 209 LLSYGNSHDIF 241
           LL Y N+HDIF
Sbjct: 45  LLQYSNNHDIF 55


>AY344836-1|AAR05807.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 209 LLSYGNSHDIF 241
           LL Y N+HDIF
Sbjct: 45  LLQYSNNHDIF 55


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,108
Number of Sequences: 2352
Number of extensions: 11196
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)