Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte12e01
         (569 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D5649A Cluster: PREDICTED: similar to CG14229-PA...    77   4e-13
UniRef50_Q9VWD7 Cluster: CG14229-PA; n=1; Drosophila melanogaste...    61   2e-08
UniRef50_Q1HQK9 Cluster: Possible transcription factor; n=2; Aed...    52   1e-05
UniRef50_Q7PX82 Cluster: ENSANGP00000013864; n=1; Anopheles gamb...    50   4e-05
UniRef50_Q8IKR9 Cluster: Putative uncharacterized protein; n=1; ...    34   2.7  
UniRef50_A7TM66 Cluster: Putative uncharacterized protein; n=1; ...    33   4.7  
UniRef50_A5FMW0 Cluster: TonB-dependent receptor; n=1; Flavobact...    33   6.2  

>UniRef50_UPI0000D5649A Cluster: PREDICTED: similar to CG14229-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG14229-PA - Tribolium castaneum
          Length = 111

 Score = 76.6 bits (180), Expect = 4e-13
 Identities = 46/110 (41%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
 Frame = -1

Query: 383 MTENRKRSRE--DDTCEFMPLSKRINNLHINNGLV---NTSASQSRDSSQVXXXXXXXXX 219
           MT+NRKR R   +D  EFMPLSKRINNLHINNGL    +     S               
Sbjct: 1   MTQNRKRGRNLHEDEVEFMPLSKRINNLHINNGLFLDNSNPLGASEWGPGPPSFVHQLPE 60

Query: 218 XXXXXXXXXXXNRRPSYDPGINSSQSDYYYN-NKLLFELHLERIQRSGQQ 72
                      N  P Y P +N +Q+ +Y+N NKLLFE+++ER+QR   Q
Sbjct: 61  SPPGSVQSLDWNSSPQYSPDLNENQNPHYFNINKLLFEMYVERLQRGCHQ 110


>UniRef50_Q9VWD7 Cluster: CG14229-PA; n=1; Drosophila
           melanogaster|Rep: CG14229-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 106

 Score = 60.9 bits (141), Expect = 2e-08
 Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
 Frame = -1

Query: 377 ENRKRSREDDTCEFMPLSKRINNLHINNGLVNTSASQSRDSSQVXXXXXXXXXXXXXXXX 198
           + RKRSRED+     PLSKRINNL++N    N+S+S S     +                
Sbjct: 6   KTRKRSREDELACESPLSKRINNLNLNYEDGNSSSSSSCSIPPLSGGGATGGSGGSDAAG 65

Query: 197 XXXXNRRPSYDPGINSSQSDYYYN-NKLLFELHLERIQRSGQ 75
                    Y+P + + Q+ +YY  NK+L++LH+ERI+RS Q
Sbjct: 66  NGVAAGY-EYNPELGAEQNPFYYEKNKMLYDLHVERIKRSSQ 106


>UniRef50_Q1HQK9 Cluster: Possible transcription factor; n=2; Aedes
           aegypti|Rep: Possible transcription factor - Aedes
           aegypti (Yellowfever mosquito)
          Length = 146

 Score = 51.6 bits (118), Expect = 1e-05
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = -1

Query: 383 MTENRKRSREDDTCEFMPLSKRINNLHINN 294
           + + RKRSRE+D  EFMPLSKRINNLH+NN
Sbjct: 4   VVDPRKRSREEDVNEFMPLSKRINNLHLNN 33


>UniRef50_Q7PX82 Cluster: ENSANGP00000013864; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000013864 - Anopheles gambiae
           str. PEST
          Length = 168

 Score = 50.0 bits (114), Expect = 4e-05
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = -1

Query: 377 ENRKRSREDDTCEFMPLSKRINNLHINN 294
           + RKRSRE++  EFMPLSKRINNLH+NN
Sbjct: 6   DTRKRSREEEQNEFMPLSKRINNLHLNN 33


>UniRef50_Q8IKR9 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1374

 Score = 33.9 bits (74), Expect = 2.7
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = -1

Query: 464  QPMTFGKDYALNFMTCLNNNGQYLFQTMTENRKRSREDDTCEFMPLSKR-INNLHINNGL 288
            QP T   D  LN    L NN Q   Q    NR  +R+   C+++  +   +NN HINN +
Sbjct: 1150 QPSTHS-DVPLNNQ--LKNNLQKKSQNNIYNRDENRQAKNCKYLKKTNTLLNNEHINNMV 1206

Query: 287  VNTSASQSRD 258
             N   ++++D
Sbjct: 1207 SNLDNTKTKD 1216


>UniRef50_A7TM66 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 1410

 Score = 33.1 bits (72), Expect = 4.7
 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = -1

Query: 434 LNFMTCLNNNGQYLFQTMTENRKRSREDDTCEFMPLSKRINNL-HINNGLVNTSASQS 264
           +N  TC NNN Q  F     N      +DT E++  S  INN+ +INN + +TS S +
Sbjct: 359 INNFTCNNNNSQLTFPINDFNL-----NDTIEWINGSSNINNINNINNNINSTSYSNN 411


>UniRef50_A5FMW0 Cluster: TonB-dependent receptor; n=1;
           Flavobacterium johnsoniae UW101|Rep: TonB-dependent
           receptor - Flavobacterium johnsoniae UW101
          Length = 696

 Score = 32.7 bits (71), Expect = 6.2
 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = -1

Query: 398 YLFQTMTENRKRSREDDTCEFMPLSKR-INNLHINNGLVNTSAS 270
           ++FQ +   +K S+  D+ +   L +  I++LHINN L+NT AS
Sbjct: 14  FVFQNIEAQKKGSKTIDSLKTEKLKEVVISSLHINNSLLNTPAS 57


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,935,309
Number of Sequences: 1657284
Number of extensions: 8254335
Number of successful extensions: 18541
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18530
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)