Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12d20
(611 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 34 0.092
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 34 0.092
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 34 0.092
Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical pr... 32 0.37
X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic int... 32 0.37
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 31 0.49
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 31 0.65
Z70287-4|CAA94297.1| 299|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z98866-18|CAB11555.2| 387|Caenorhabditis elegans Hypothetical p... 29 2.0
U41273-7|AAP68952.1| 237|Caenorhabditis elegans Hypothetical pr... 29 2.6
U41273-6|AAA82457.2| 404|Caenorhabditis elegans Hypothetical pr... 29 2.6
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 29 2.6
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 29 2.6
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans trithorax-rel... 29 2.6
AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell... 29 2.6
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 3.5
U41107-11|AAC71161.1| 454|Caenorhabditis elegans Hypothetical p... 29 3.5
U41107-10|AAN39669.1| 416|Caenorhabditis elegans Hypothetical p... 29 3.5
U41107-9|AAK73877.1| 471|Caenorhabditis elegans Hypothetical pr... 29 3.5
U41107-8|AAN39670.1| 468|Caenorhabditis elegans Hypothetical pr... 29 3.5
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 29 3.5
AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans hom... 29 3.5
AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans hom... 29 3.5
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z30973-4|CAA83220.3| 431|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z22175-1|CAE17902.1| 156|Caenorhabditis elegans Hypothetical pr... 28 4.6
EU068465-1|ABU49430.1| 715|Caenorhabditis elegans PRO-2 protein. 28 4.6
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 28 4.6
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 28 4.6
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 28 4.6
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 28 4.6
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 28 4.6
Z99268-1|CAB16466.1| 715|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z81573-4|CAB04627.1| 715|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical p... 28 6.0
Z66519-14|CAA91377.2| 1146|Caenorhabditis elegans Hypothetical p... 28 6.0
Z49908-10|CAA90103.1| 715|Caenorhabditis elegans Hypothetical p... 28 6.0
U56101-1|AAC47459.1| 1167|Caenorhabditis elegans AGE-1 protein. 28 6.0
AL110499-5|CAB57914.1| 1146|Caenorhabditis elegans Hypothetical ... 28 6.0
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 27 8.0
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z50109-1|CAA90433.3| 142|Caenorhabditis elegans Hypothetical pr... 27 8.0
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 27 8.0
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 27 8.0
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 33.9 bits (74), Expect = 0.092
Identities = 20/94 (21%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Frame = -3
Query: 543 SLDEHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNL-------HAIXYDVRLKYREIME 385
S + +LT K+ + +G LRLS SK+++ +++ D L ++ ++R K +I
Sbjct: 1829 SFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELR-KTIDIQS 1887
Query: 384 SLKKDLMYNEKECKRLQEQIEWVSRRRAELKDEV 283
+ + + Q ++ + R+ +L++E+
Sbjct: 1888 KTSHEYQLLKDQLLNTQNELNGANNRKQQLENEL 1921
Score = 31.5 bits (68), Expect = 0.49
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 558 LEQKDSLDEHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLHAIXYD 415
+E+ L+ D RK+A+ E LR ++ K+ E Q LH + D
Sbjct: 452 IERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQD 499
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 33.9 bits (74), Expect = 0.092
Identities = 20/94 (21%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Frame = -3
Query: 543 SLDEHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNL-------HAIXYDVRLKYREIME 385
S + +LT K+ + +G LRLS SK+++ +++ D L ++ ++R K +I
Sbjct: 1902 SFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELR-KTIDIQS 1960
Query: 384 SLKKDLMYNEKECKRLQEQIEWVSRRRAELKDEV 283
+ + + Q ++ + R+ +L++E+
Sbjct: 1961 KTSHEYQLLKDQLLNTQNELNGANNRKQQLENEL 1994
Score = 31.5 bits (68), Expect = 0.49
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 558 LEQKDSLDEHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLHAIXYD 415
+E+ L+ D RK+A+ E LR ++ K+ E Q LH + D
Sbjct: 525 IERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQD 572
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 33.9 bits (74), Expect = 0.092
Identities = 20/94 (21%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Frame = -3
Query: 543 SLDEHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNL-------HAIXYDVRLKYREIME 385
S + +LT K+ + +G LRLS SK+++ +++ D L ++ ++R K +I
Sbjct: 1902 SFESERQILTEKIKELDGALRLSDSKVQDMKDDTDKLRRDLTKAESVENELR-KTIDIQS 1960
Query: 384 SLKKDLMYNEKECKRLQEQIEWVSRRRAELKDEV 283
+ + + Q ++ + R+ +L++E+
Sbjct: 1961 KTSHEYQLLKDQLLNTQNELNGANNRKQQLENEL 1994
Score = 31.5 bits (68), Expect = 0.49
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 558 LEQKDSLDEHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLHAIXYD 415
+E+ L+ D RK+A+ E LR ++ K+ E Q LH + D
Sbjct: 525 IERNIELESRGDDSQRKIAELEAELRRNREKLNEAQGALKKLHEMAQD 572
>Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 31.9 bits (69), Expect = 0.37
Identities = 23/105 (21%), Positives = 46/105 (43%)
Frame = -3
Query: 579 NVVQGFRLEQKDSLDEHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLHAIXYDVRLKY 400
N+ QG+ E+ L L L KLAD E R L + +I+E + + D + Y
Sbjct: 309 NMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQELNYQLE-------DDQRSY 361
Query: 399 REIMESLKKDLMYNEKECKRLQEQIEWVSRRRAELKDEVRLGQRL 265
+ + +EC+ L +++ + + L E+ + +++
Sbjct: 362 EAALNDRDSQIRKMREECQALMVELQMLLDTKQTLDAEIAIYRKM 406
>Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 31.9 bits (69), Expect = 0.37
Identities = 23/105 (21%), Positives = 46/105 (43%)
Frame = -3
Query: 579 NVVQGFRLEQKDSLDEHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLHAIXYDVRLKY 400
N+ QG+ E+ L L L KLAD E R L + +I+E + + D + Y
Sbjct: 317 NMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQELNYQLE-------DDQRSY 369
Query: 399 REIMESLKKDLMYNEKECKRLQEQIEWVSRRRAELKDEVRLGQRL 265
+ + +EC+ L +++ + + L E+ + +++
Sbjct: 370 EAALNDRDSQIRKMREECQALMVELQMLLDTKQTLDAEIAIYRKM 414
>Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 31.9 bits (69), Expect = 0.37
Identities = 23/105 (21%), Positives = 46/105 (43%)
Frame = -3
Query: 579 NVVQGFRLEQKDSLDEHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLHAIXYDVRLKY 400
N+ QG+ E+ L L L KLAD E R L + +I+E + + D + Y
Sbjct: 317 NMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQELNYQLE-------DDQRSY 369
Query: 399 REIMESLKKDLMYNEKECKRLQEQIEWVSRRRAELKDEVRLGQRL 265
+ + +EC+ L +++ + + L E+ + +++
Sbjct: 370 EAALNDRDSQIRKMREECQALMVELQMLLDTKQTLDAEIAIYRKM 414
>Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 31.9 bits (69), Expect = 0.37
Identities = 23/105 (21%), Positives = 46/105 (43%)
Frame = -3
Query: 579 NVVQGFRLEQKDSLDEHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLHAIXYDVRLKY 400
N+ QG+ E+ L L L KLAD E R L + +I+E + + D + Y
Sbjct: 309 NMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQELNYQLE-------DDQRSY 361
Query: 399 REIMESLKKDLMYNEKECKRLQEQIEWVSRRRAELKDEVRLGQRL 265
+ + +EC+ L +++ + + L E+ + +++
Sbjct: 362 EAALNDRDSQIRKMREECQALMVELQMLLDTKQTLDAEIAIYRKM 406
>Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 31.9 bits (69), Expect = 0.37
Identities = 23/105 (21%), Positives = 46/105 (43%)
Frame = -3
Query: 579 NVVQGFRLEQKDSLDEHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLHAIXYDVRLKY 400
N+ QG+ E+ L L L KLAD E R L + +I+E + + D + Y
Sbjct: 317 NMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQELNYQLE-------DDQRSY 369
Query: 399 REIMESLKKDLMYNEKECKRLQEQIEWVSRRRAELKDEVRLGQRL 265
+ + +EC+ L +++ + + L E+ + +++
Sbjct: 370 EAALNDRDSQIRKMREECQALMVELQMLLDTKQTLDAEIAIYRKM 414
>Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 31.9 bits (69), Expect = 0.37
Identities = 23/105 (21%), Positives = 46/105 (43%)
Frame = -3
Query: 579 NVVQGFRLEQKDSLDEHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLHAIXYDVRLKY 400
N+ QG+ E+ L L L KLAD E R L + +I+E + + D + Y
Sbjct: 317 NMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQELNYQLE-------DDQRSY 369
Query: 399 REIMESLKKDLMYNEKECKRLQEQIEWVSRRRAELKDEVRLGQRL 265
+ + +EC+ L +++ + + L E+ + +++
Sbjct: 370 EAALNDRDSQIRKMREECQALMVELQMLLDTKQTLDAEIAIYRKM 414
>X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 592
Score = 31.9 bits (69), Expect = 0.37
Identities = 23/105 (21%), Positives = 46/105 (43%)
Frame = -3
Query: 579 NVVQGFRLEQKDSLDEHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLHAIXYDVRLKY 400
N+ QG+ E+ L L L KLAD E R L + +I+E + + D + Y
Sbjct: 336 NMEQGYAKEEVKRLRTQLSDLRGKLADLESRNSLLEKQIQELNYQLE-------DDQRSY 388
Query: 399 REIMESLKKDLMYNEKECKRLQEQIEWVSRRRAELKDEVRLGQRL 265
+ + +EC+ L +++ + + L E+ + +++
Sbjct: 389 EAALNDRDSQIRKMREECQALMVELQMLLDTKQTLDAEIAIYRKM 433
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 31.5 bits (68), Expect = 0.49
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = -3
Query: 513 RKLADKEGRLRLSKSKIRETQNEXDNLHAIX--YDVRLKYREIMESLKKDLMYNEKECKR 340
+KL +L+ S+ E QN D I + RL+ E D+M ++ ++
Sbjct: 865 QKLEQVGKKLKQLLSEYEENQNALDEQRKITEALEKRLQASESARDAPDDVMMTKERVEQ 924
Query: 339 LQEQIEWVSRRRAELKDEVR 280
L+ +IEW LK +R
Sbjct: 925 LEGEIEWKEEECEGLKRRIR 944
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 31.1 bits (67), Expect = 0.65
Identities = 21/92 (22%), Positives = 41/92 (44%)
Frame = -3
Query: 558 LEQKDSLDEHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLHAIXYDVRLKYREIMESL 379
LE D+ ++ L +K+ + R L+ +++ Q + D L +Y M L
Sbjct: 171 LEDARKKDDEIEELKKKVNSESSRATLADEAVQKLQTDKDKLEE-------EYMNDMRDL 223
Query: 378 KKDLMYNEKECKRLQEQIEWVSRRRAELKDEV 283
KK L N++ +++ + ++ ELK V
Sbjct: 224 KKALKDNQEGLEKIAKDVKNKEGEIEELKKSV 255
>Z70287-4|CAA94297.1| 299|Caenorhabditis elegans Hypothetical
protein R09E10.6 protein.
Length = 299
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -3
Query: 210 RGQDYKITEKPHVQRSV---TELRHRKEPHLPRPNPAASLVIKTSPPQTSEAIVTH 52
RG + T P V+R V LR++ E HL PA+ + K+S P S V H
Sbjct: 196 RGVSSEDTLIPSVRRGVIPVNTLRYQIEKHLEMCTPASEQLSKSSDPNISSMYVFH 251
>Z98866-18|CAB11555.2| 387|Caenorhabditis elegans Hypothetical
protein Y49E10.21 protein.
Length = 387
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = -3
Query: 540 LDEHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLHAIXYDVRLKYREIMESLKKDLMY 361
L + L L + ADKE R + + ++ +NE NL ++ +Y+ +E ++ L
Sbjct: 30 LRQDLSSLQKLKADKESAAREALTALKTKKNELKNLKNDVESLKNEYKTYIEMVENGLKQ 89
Query: 360 NEKECKRLQEQIEWV 316
+ + K++ + E V
Sbjct: 90 SGLDIKQVVQVFERV 104
>U41273-7|AAP68952.1| 237|Caenorhabditis elegans Hypothetical
protein C26B9.1b protein.
Length = 237
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 484 EATFLVSKFSGEYIQVLIEAVLLLQPEPLHDV 579
EA L+ K+S EY++ +++ L+ +P+H V
Sbjct: 171 EAASLILKYSQEYVKSVVKKRLIFPSKPIHGV 202
>U41273-6|AAA82457.2| 404|Caenorhabditis elegans Hypothetical
protein C26B9.1a protein.
Length = 404
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 484 EATFLVSKFSGEYIQVLIEAVLLLQPEPLHDV 579
EA L+ K+S EY++ +++ L+ +P+H V
Sbjct: 338 EAASLILKYSQEYVKSVVKKRLIFPSKPIHGV 369
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical
protein R07G3.3c protein.
Length = 1316
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 387 ESLKKDLMYNEKECKRLQEQIEWVSRRRAELKDEVRLGQRL 265
++ ++DL Y E ++ Q E+VS+R AEL V R+
Sbjct: 454 DTAQRDLAYVRAELEKYQRDYEFVSKRNAELLYAVERQSRM 494
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical
protein R07G3.3a protein.
Length = 1982
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 387 ESLKKDLMYNEKECKRLQEQIEWVSRRRAELKDEVRLGQRL 265
++ ++DL Y E ++ Q E+VS+R AEL V R+
Sbjct: 454 DTAQRDLAYVRAELEKYQRDYEFVSKRNAELLYAVERQSRM 494
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical
protein R07G3.3b protein.
Length = 1987
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 387 ESLKKDLMYNEKECKRLQEQIEWVSRRRAELKDEVRLGQRL 265
++ ++DL Y E ++ Q E+VS+R AEL V R+
Sbjct: 454 DTAQRDLAYVRAELEKYQRDYEFVSKRNAELLYAVERQSRM 494
>AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans
trithorax-related protein LIN-59 protein.
Length = 1312
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/95 (22%), Positives = 43/95 (45%)
Frame = -3
Query: 564 FRLEQKDSLDEHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLHAIXYDVRLKYREIME 385
FRL+ ++ ++ L+ LT+K+++ LRLS + N + +L E +
Sbjct: 440 FRLKVREMMERKLEQLTQKMSEDMTELRLSHLTSSKMVNGERGKRRESFLRQL--NEQSK 497
Query: 384 SLKKDLMYNEKECKRLQEQIEWVSRRRAELKDEVR 280
L+K M K + + + + + +K EV+
Sbjct: 498 KLRKGGMLGRKRLRMFMTESDILEENKDNIKKEVK 532
>AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell
lineage protein 59 protein.
Length = 1312
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/95 (22%), Positives = 43/95 (45%)
Frame = -3
Query: 564 FRLEQKDSLDEHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLHAIXYDVRLKYREIME 385
FRL+ ++ ++ L+ LT+K+++ LRLS + N + +L E +
Sbjct: 440 FRLKVREMMERKLEQLTQKMSEDMTELRLSHLTSSKMVNGERGKRRESFLRQL--NEQSK 497
Query: 384 SLKKDLMYNEKECKRLQEQIEWVSRRRAELKDEVR 280
L+K M K + + + + + +K EV+
Sbjct: 498 KLRKGGMLGRKRLRMFMTESDILEENKDNIKKEVK 532
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.7 bits (61), Expect = 3.5
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = -3
Query: 534 EHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLHAIXYDVRLKYREI---MESLKKDLM 364
E +++ ++L + + + K ++ +NE + A+ D EI ME+ KK+L
Sbjct: 250 EAAEIVKKQLEEAQSSIENLK---KDAENERNLKTALESDESSAISEITKQMEAAKKELE 306
Query: 363 YNEKECKRLQEQIEWVSRRRAELKDEVRLGQRLY 262
+EKE L+EQ++ + + +++++ Q+ +
Sbjct: 307 ASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTW 340
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.7 bits (61), Expect = 3.5
Identities = 21/94 (22%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = -3
Query: 534 EHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLHAIXYDVRLKYREI---MESLKKDLM 364
E +++ ++L + + + K ++ +NE + A+ D EI ME+ KK+L
Sbjct: 250 EAAEIVKKQLEEAQSSIENLK---KDAENERNLKTALESDESSAISEITKQMEAAKKELE 306
Query: 363 YNEKECKRLQEQIEWVSRRRAELKDEVRLGQRLY 262
+EKE L+EQ++ + + +++++ Q+ +
Sbjct: 307 ASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTW 340
>U41107-11|AAC71161.1| 454|Caenorhabditis elegans Hypothetical
protein F55C12.1a protein.
Length = 454
Score = 28.7 bits (61), Expect = 3.5
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Frame = -3
Query: 561 RLEQKDS-LDEHLDVLTRKLADKEGRLR--LSKSKIRETQNEXDNLHAIXYDVR---LKY 400
RL+ ++S L E + L +L D E R + LS K R T++ + LKY
Sbjct: 79 RLKTENSVLKERMHNLEEQLTDNEDRFKQLLSDEKARGTESMSRLKREKELETESWNLKY 138
Query: 399 REIME---SLKKDLMYNEKECKRLQEQIEWVSRRRAE 298
+ + + S+KKD + +E KR++ ++E + E
Sbjct: 139 QMLEKDLISVKKDAERSNEETKRIRNELEKTENKLEE 175
>U41107-10|AAN39669.1| 416|Caenorhabditis elegans Hypothetical
protein F55C12.1c protein.
Length = 416
Score = 28.7 bits (61), Expect = 3.5
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Frame = -3
Query: 561 RLEQKDS-LDEHLDVLTRKLADKEGRLR--LSKSKIRETQNEXDNLHAIXYDVR---LKY 400
RL+ ++S L E + L +L D E R + LS K R T++ + LKY
Sbjct: 41 RLKTENSVLKERMHNLEEQLTDNEDRFKQLLSDEKARGTESMSRLKREKELETESWNLKY 100
Query: 399 REIME---SLKKDLMYNEKECKRLQEQIEWVSRRRAE 298
+ + + S+KKD + +E KR++ ++E + E
Sbjct: 101 QMLEKDLISVKKDAERSNEETKRIRNELEKTENKLEE 137
>U41107-9|AAK73877.1| 471|Caenorhabditis elegans Hypothetical
protein F55C12.1b protein.
Length = 471
Score = 28.7 bits (61), Expect = 3.5
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Frame = -3
Query: 561 RLEQKDS-LDEHLDVLTRKLADKEGRLR--LSKSKIRETQNEXDNLHAIXYDVR---LKY 400
RL+ ++S L E + L +L D E R + LS K R T++ + LKY
Sbjct: 96 RLKTENSVLKERMHNLEEQLTDNEDRFKQLLSDEKARGTESMSRLKREKELETESWNLKY 155
Query: 399 REIME---SLKKDLMYNEKECKRLQEQIEWVSRRRAE 298
+ + + S+KKD + +E KR++ ++E + E
Sbjct: 156 QMLEKDLISVKKDAERSNEETKRIRNELEKTENKLEE 192
>U41107-8|AAN39670.1| 468|Caenorhabditis elegans Hypothetical
protein F55C12.1d protein.
Length = 468
Score = 28.7 bits (61), Expect = 3.5
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Frame = -3
Query: 561 RLEQKDS-LDEHLDVLTRKLADKEGRLR--LSKSKIRETQNEXDNLHAIXYDVR---LKY 400
RL+ ++S L E + L +L D E R + LS K R T++ + LKY
Sbjct: 93 RLKTENSVLKERMHNLEEQLTDNEDRFKQLLSDEKARGTESMSRLKREKELETESWNLKY 152
Query: 399 REIME---SLKKDLMYNEKECKRLQEQIEWVSRRRAE 298
+ + + S+KKD + +E KR++ ++E + E
Sbjct: 153 QMLEKDLISVKKDAERSNEETKRIRNELEKTENKLEE 189
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/44 (27%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -3
Query: 558 LEQKDSLD-EHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLH 430
+EQKD L+ E L + + LAD + ++ + ++ + +NE + ++
Sbjct: 225 VEQKDGLENEQLSIAMKDLADAKHKIVFLEERVSQLENEAEKVN 268
>AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform b protein.
Length = 619
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/44 (27%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -3
Query: 558 LEQKDSLD-EHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLH 430
+EQKD L+ E L + + LAD + ++ + ++ + +NE + ++
Sbjct: 225 VEQKDGLENEQLSIAMKDLADAKHKIVFLEERVSQLENEAEKVN 268
>AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform c protein.
Length = 621
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/44 (27%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -3
Query: 558 LEQKDSLD-EHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLH 430
+EQKD L+ E L + + LAD + ++ + ++ + +NE + ++
Sbjct: 225 VEQKDGLENEQLSIAMKDLADAKHKIVFLEERVSQLENEAEKVN 268
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 510 KLADKEG-RLRLSKSKIRETQNEXDNLHA 427
KLA + G RL + KI ET++E D LHA
Sbjct: 2753 KLAARAGKRLAQREKKITETEDEIDKLHA 2781
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 510 KLADKEG-RLRLSKSKIRETQNEXDNLHA 427
KLA + G RL + KI ET++E D LHA
Sbjct: 2753 KLAARAGKRLAQREKKITETEDEIDKLHA 2781
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 510 KLADKEG-RLRLSKSKIRETQNEXDNLHA 427
KLA + G RL + KI ET++E D LHA
Sbjct: 2208 KLAARAGKRLAQREKKITETEDEIDKLHA 2236
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 510 KLADKEG-RLRLSKSKIRETQNEXDNLHA 427
KLA + G RL + KI ET++E D LHA
Sbjct: 2753 KLAARAGKRLAQREKKITETEDEIDKLHA 2781
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 510 KLADKEG-RLRLSKSKIRETQNEXDNLHA 427
KLA + G RL + KI ET++E D LHA
Sbjct: 2753 KLAARAGKRLAQREKKITETEDEIDKLHA 2781
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 510 KLADKEG-RLRLSKSKIRETQNEXDNLHA 427
KLA + G RL + KI ET++E D LHA
Sbjct: 2208 KLAARAGKRLAQREKKITETEDEIDKLHA 2236
>Z30973-4|CAA83220.3| 431|Caenorhabditis elegans Hypothetical
protein B0284.1 protein.
Length = 431
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/81 (22%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = -3
Query: 519 LTRKLADKEGRLRLSKSKIRETQNEXDNLHAIXYDVRLKYREIMESLKKDLMYNEKECKR 340
+T++L D + + + ++ ET+ + + + + + +E + S KK+ Y+EK+ ++
Sbjct: 119 VTKRLTDHQNLMTREQGRLAETEKKIEENVVDMKNKKAEAQEKLHSEKKE--YDEKKLQK 176
Query: 339 LQE---QIEWVSRRRAELKDE 286
+E +IE + ++ A+L+ E
Sbjct: 177 SEENALKIEDLHKQTAQLEIE 197
>Z22175-1|CAE17902.1| 156|Caenorhabditis elegans Hypothetical
protein K01F9.2 protein.
Length = 156
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +2
Query: 323 SICSCSLLHSFSLYIKSFFSDSMISRYFRRTSXSMAWRLSISFCVSRILDLERR 484
S+ SLL+SFS +S S ++ RR + + + + +SR+ +E +
Sbjct: 64 SVSQGSLLNSFSTRRRSVLSTDILDSPSRRLTPRIEEEMDVQMAISRLRSIENK 117
>EU068465-1|ABU49430.1| 715|Caenorhabditis elegans PRO-2 protein.
Length = 715
Score = 28.3 bits (60), Expect = 4.6
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -3
Query: 585 HHNVVQGFRLEQKDSLDEHLDVLTRKLAD--KEGRLRLSKSKIRETQNEXDNLHAIXYDV 412
H ++ +GF+ + K+ LDVL RK D E ++R + + + + V
Sbjct: 574 HAHLFRGFQTKLKEHSRFVLDVLARKSVDINDEMQVRAVRFDLNNPDSPIKTFYRQWEKV 633
Query: 411 -RLKYREIMESLKKDLMYNEKE 349
++K R +E+ KKD +KE
Sbjct: 634 WKMKERSAVENSKKDDKKKKKE 655
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 510 KLADKEG-RLRLSKSKIRETQNEXDNLHA 427
KLA + G RL + KI ET++E D LHA
Sbjct: 2753 KLAARAGKRLAQREKKITETEDEIDKLHA 2781
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 510 KLADKEG-RLRLSKSKIRETQNEXDNLHA 427
KLA + G RL + KI ET++E D LHA
Sbjct: 2753 KLAARAGKRLAQREKKITETEDEIDKLHA 2781
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 510 KLADKEG-RLRLSKSKIRETQNEXDNLHA 427
KLA + G RL + KI ET++E D LHA
Sbjct: 2208 KLAARAGKRLAQREKKITETEDEIDKLHA 2236
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 510 KLADKEG-RLRLSKSKIRETQNEXDNLHA 427
KLA + G RL + KI ET++E D LHA
Sbjct: 2753 KLAARAGKRLAQREKKITETEDEIDKLHA 2781
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 510 KLADKEG-RLRLSKSKIRETQNEXDNLHA 427
KLA + G RL + KI ET++E D LHA
Sbjct: 2753 KLAARAGKRLAQREKKITETEDEIDKLHA 2781
>Z99268-1|CAB16466.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 27.9 bits (59), Expect = 6.0
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -3
Query: 585 HHNVVQGFRLEQKDSLDEHLDVLTRKLAD--KEGRLRLSKSKIRETQNEXDNLHAIXYDV 412
H ++ +GF+ + K+ LDVL RK D E ++R + + + + V
Sbjct: 574 HAHLFRGFQTKLKEHSRFVLDVLARKSVDINDEMQVRAVRFDLNNHDSPIKTFYRQWEKV 633
Query: 411 -RLKYREIMESLKKDLMYNEKE 349
++K R +E+ KKD +KE
Sbjct: 634 WKMKERSAVENSKKDDKKKKKE 655
>Z81573-4|CAB04627.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 27.9 bits (59), Expect = 6.0
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -3
Query: 585 HHNVVQGFRLEQKDSLDEHLDVLTRKLAD--KEGRLRLSKSKIRETQNEXDNLHAIXYDV 412
H ++ +GF+ + K+ LDVL RK D E ++R + + + + V
Sbjct: 574 HAHLFRGFQTKLKEHSRFVLDVLARKSVDINDEMQVRAVRFDLNNHDSPIKTFYRQWEKV 633
Query: 411 -RLKYREIMESLKKDLMYNEKE 349
++K R +E+ KKD +KE
Sbjct: 634 WKMKERSAVENSKKDDKKKKKE 655
>Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical
protein F44D12.1 protein.
Length = 1034
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -3
Query: 207 GQDYKITEKPHVQRSVTELRHRKEPHLPRPN--PAASLVIKTSPPQTSE 67
G D+ I+ S E R K+ HLPR N + LV ++S P+ E
Sbjct: 625 GSDFSISTTGSAMHSYAEGRSNKKYHLPRGNHHSESLLVNRSSQPRLVE 673
>Z66519-14|CAA91377.2| 1146|Caenorhabditis elegans Hypothetical
protein B0334.8 protein.
Length = 1146
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = -3
Query: 438 NLHAIXYDVRLKYREIMESLKKDLMYNEKECKRLQEQIEWVSRRRAELKDEVRLGQRLY 262
N +D+ +K L ++Y + + K + ++ WV+ + +DE+R GQ L+
Sbjct: 442 NKEMYTFDLYMKDMPPSAVLSIRVLYGKVKLKSEEFEVGWVNMSLTDWRDELRQGQFLF 500
>Z49908-10|CAA90103.1| 715|Caenorhabditis elegans Hypothetical
protein C07E3.2 protein.
Length = 715
Score = 27.9 bits (59), Expect = 6.0
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -3
Query: 585 HHNVVQGFRLEQKDSLDEHLDVLTRKLAD--KEGRLRLSKSKIRETQNEXDNLHAIXYDV 412
H ++ +GF+ + K+ LDVL RK D E ++R + + + + V
Sbjct: 574 HAHLFRGFQTKLKEHSRFVLDVLARKSVDINDEMQVRAVRFDLNNHDSPIKTFYRQWEKV 633
Query: 411 -RLKYREIMESLKKDLMYNEKE 349
++K R +E+ KKD +KE
Sbjct: 634 WKMKERSAVENSKKDDKKKKKE 655
>U56101-1|AAC47459.1| 1167|Caenorhabditis elegans AGE-1 protein.
Length = 1167
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = -3
Query: 438 NLHAIXYDVRLKYREIMESLKKDLMYNEKECKRLQEQIEWVSRRRAELKDEVRLGQRLY 262
N +D+ +K L ++Y + + K + ++ WV+ + +DE+R GQ L+
Sbjct: 463 NKEMYTFDLYMKDMPPSAVLSIRVLYGKVKLKSEEFEVGWVNMSLTDWRDELRQGQFLF 521
>AL110499-5|CAB57914.1| 1146|Caenorhabditis elegans Hypothetical
protein B0334.8 protein.
Length = 1146
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = -3
Query: 438 NLHAIXYDVRLKYREIMESLKKDLMYNEKECKRLQEQIEWVSRRRAELKDEVRLGQRLY 262
N +D+ +K L ++Y + + K + ++ WV+ + +DE+R GQ L+
Sbjct: 442 NKEMYTFDLYMKDMPPSAVLSIRVLYGKVKLKSEEFEVGWVNMSLTDWRDELRQGQFLF 500
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 27.5 bits (58), Expect = 8.0
Identities = 18/81 (22%), Positives = 44/81 (54%)
Frame = -3
Query: 564 FRLEQKDSLDEHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLHAIXYDVRLKYREIME 385
F E+K L+ + L +L ++ L++ K+R++Q + + + A D+ ++ R + E
Sbjct: 1733 FSNEEKRRLEAKVIDLEDQLDEEASANELAQEKVRKSQQQLEQMTA---DLAME-RSVCE 1788
Query: 384 SLKKDLMYNEKECKRLQEQIE 322
+ D + E+ + L++Q++
Sbjct: 1789 RTESDKIALERANRDLKQQLQ 1809
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 27.5 bits (58), Expect = 8.0
Identities = 18/81 (22%), Positives = 44/81 (54%)
Frame = -3
Query: 564 FRLEQKDSLDEHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLHAIXYDVRLKYREIME 385
F E+K L+ + L +L ++ L++ K+R++Q + + + A D+ ++ R + E
Sbjct: 1733 FSNEEKRRLEAKVIDLEDQLDEEASANELAQEKVRKSQQQLEQMTA---DLAME-RSVCE 1788
Query: 384 SLKKDLMYNEKECKRLQEQIE 322
+ D + E+ + L++Q++
Sbjct: 1789 RTESDKIALERANRDLKQQLQ 1809
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 411 RLKYREIMESLKKDLMYNEKECKRLQEQ 328
RLK+ E+ K+DL ++E KR QE+
Sbjct: 519 RLKHEEMQRKYKEDLEKRQEEQKRQQEE 546
>Z50109-1|CAA90433.3| 142|Caenorhabditis elegans Hypothetical
protein C09H10.1 protein.
Length = 142
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 480 LSKSKIRETQNEXDNLHAIXYDVRLKYREIM-ESLKKDLMYNEKECKRLQEQI 325
+SK +++ Q E D L + ++ + E+LKK L +K+ + L EQ+
Sbjct: 81 MSKDDLKKAQEELDKLKWDNIQMEMEIEKFKKENLKKQLEVEKKKREMLDEQL 133
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 27.5 bits (58), Expect = 8.0
Identities = 18/81 (22%), Positives = 44/81 (54%)
Frame = -3
Query: 564 FRLEQKDSLDEHLDVLTRKLADKEGRLRLSKSKIRETQNEXDNLHAIXYDVRLKYREIME 385
F E+K L+ + L +L ++ L++ K+R++Q + + + A D+ ++ R + E
Sbjct: 1733 FSNEEKRRLEAKVIDLEDQLDEEASANELAQEKVRKSQQQLEQMTA---DLAME-RSVCE 1788
Query: 384 SLKKDLMYNEKECKRLQEQIE 322
+ D + E+ + L++Q++
Sbjct: 1789 RTESDKIALERANRDLKQQLQ 1809
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 411 RLKYREIMESLKKDLMYNEKECKRLQEQ 328
RLK+ E+ K+DL ++E KR QE+
Sbjct: 519 RLKHEEMQRKYKEDLEKRQEEQKRQQEE 546
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,804,246
Number of Sequences: 27780
Number of extensions: 260096
Number of successful extensions: 1270
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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