Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12d16
(735 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 245 3e-65
02_01_0160 + 1116160-1116678 241 3e-64
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 238 3e-63
09_06_0359 + 22508900-22509439 233 1e-61
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 213 2e-55
10_01_0309 + 3417602-3418147 202 2e-52
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 188 5e-48
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 178 4e-45
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 174 7e-44
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 158 5e-39
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 151 4e-37
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 123 2e-36
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 144 5e-35
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 135 3e-32
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 126 2e-29
06_01_0214 + 1634171-1634173,1634263-1634742 126 2e-29
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 101 4e-22
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 96 3e-20
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 62 1e-14
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 77 2e-14
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 65 6e-11
08_02_0053 + 11721658-11721689,11721960-11722710 60 1e-09
02_01_0086 + 613113-613532 58 7e-09
01_01_0077 - 585670-585787,585921-586687 50 1e-06
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 46 3e-05
10_01_0310 + 3425099-3425218 38 0.011
06_01_0675 + 4937309-4937354,4937606-4937718,4937810-4937905,493... 31 1.3
03_04_0032 - 16663018-16663026,16663072-16663235,16663384-166635... 30 2.2
04_01_0437 + 5704279-5704788,5705133-5705207 29 3.8
01_04_0023 - 15167281-15167906,15168217-15168390,15169648-151699... 29 5.1
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 245 bits (599), Expect = 3e-65
Identities = 114/163 (69%), Positives = 134/163 (82%), Gaps = 4/163 (2%)
Frame = -3
Query: 535 QVYFDVTAD---GEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFM 365
+VYFD++ G+ +GR+VI L D+VP+TAENFRALCTGEKGFGYKGSSFHR+I DFM
Sbjct: 84 KVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCTGEKGFGYKGSSFHRVIKDFM 143
Query: 364 CQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPW 185
QGGDF NGTGGKSIYGRTF DENFKL HTGPG++SMANAGPNTNGSQFFI TV TPW
Sbjct: 144 IQGGDFDKGNGTGGKSIYGRTFKDENFKLVHTGPGVVSMANAGPNTNGSQFFICTVKTPW 203
Query: 184 LDRKHVVFGSVVEGMDVVQKMEKLGSKSG-KPIKKVVISDSGD 59
LD +HVVFG V+EGMD+V+ +E + G +P KKVVIS+ G+
Sbjct: 204 LDGRHVVFGQVIEGMDIVKMIESQETDRGDRPKKKVVISECGE 246
>02_01_0160 + 1116160-1116678
Length = 172
Score = 241 bits (591), Expect = 3e-64
Identities = 113/165 (68%), Positives = 130/165 (78%), Gaps = 7/165 (4%)
Frame = -3
Query: 535 QVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG-------YKGSSFHRII 377
+V+FD+T G P GRIV++L +VP+TAENFRALCTGEKG G YKGS+FHR+I
Sbjct: 5 RVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVI 64
Query: 376 PDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTV 197
P+FMCQGGDFT NGTGG+SIYG F+DE FK KH PGILSMANAGPNTNGSQFFI TV
Sbjct: 65 PEFMCQGGDFTRGNGTGGESIYGEKFADEVFKFKHDSPGILSMANAGPNTNGSQFFICTV 124
Query: 196 PTPWLDRKHVVFGSVVEGMDVVQKMEKLGSKSGKPIKKVVISDSG 62
P WLD KHVVFG VVEGMDVV+ +EK+GS+ G K VVI+D G
Sbjct: 125 PCSWLDGKHVVFGRVVEGMDVVKAIEKVGSRGGSTAKPVVIADCG 169
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 238 bits (583), Expect = 3e-63
Identities = 124/207 (59%), Positives = 149/207 (71%), Gaps = 10/207 (4%)
Frame = -3
Query: 649 SVMKIPIMIPVSM-LRRTLVNGTIYSAAALRFAS--TQPDKQVYFDVTADGEPLGRIVIK 479
+V + P+ P S+ L LV T+ A A + + T+ +VYFDV DG+P GR+V+
Sbjct: 11 AVRRPPMSRPASVCLWIVLVAATLALAQAKKSKADLTEVTHKVYFDVEIDGKPAGRVVMG 70
Query: 478 LNTDEVPKTAENFRALCTGEKGFG-------YKGSSFHRIIPDFMCQGGDFTNHNGTGGK 320
L VPKTAENFRALCTGEKG G +KGS+FHRIIP FM QGGDFT +G GG+
Sbjct: 71 LFGKTVPKTAENFRALCTGEKGTGKSGKALHFKGSAFHRIIPSFMIQGGDFTLGDGRGGE 130
Query: 319 SIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGM 140
SIYG F+DENFK+KHTGPG+LSMANAG +TNGSQFFITTV T WLD KHVVFG V+ GM
Sbjct: 131 SIYGTKFADENFKIKHTGPGLLSMANAGRDTNGSQFFITTVTTSWLDGKHVVFGKVLSGM 190
Query: 139 DVVQKMEKLGSKSGKPIKKVVISDSGD 59
DVV K+E G +SG P KVVI+DSG+
Sbjct: 191 DVVYKIEAEGQQSGSPKSKVVIADSGE 217
>09_06_0359 + 22508900-22509439
Length = 179
Score = 233 bits (570), Expect = 1e-61
Identities = 112/177 (63%), Positives = 133/177 (75%), Gaps = 7/177 (3%)
Frame = -3
Query: 556 ASTQPDKQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG-------YKG 398
AS P +V+FD+ GR+V++L D VPKTAENFR LCTGEKG G YKG
Sbjct: 2 ASKNP--KVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKG 59
Query: 397 SSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGS 218
S+FHRIIP+FMCQGGDFT NGTGG+SIYG F+DENFKL+HTGPG+LSMANAGPNTNGS
Sbjct: 60 SAFHRIIPNFMCQGGDFTRGNGTGGESIYGDRFADENFKLRHTGPGVLSMANAGPNTNGS 119
Query: 217 QFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLGSKSGKPIKKVVISDSGDYHEE 47
QFFI T T WLD KHVVFG VV+G VV+KME++GS SG ++V+I D G ++
Sbjct: 120 QFFICTTRTTWLDGKHVVFGKVVDGYTVVEKMEQVGSGSGGTAERVLIEDCGQLADD 176
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 213 bits (519), Expect = 2e-55
Identities = 110/189 (58%), Positives = 133/189 (70%), Gaps = 9/189 (4%)
Frame = -3
Query: 598 LVNGTIYSAAALRFAS--TQPDKQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCT 425
LV T+ A A+ + T+ +V+FD+T +G+P GRIV+ L + VPKTAENFRA+CT
Sbjct: 18 LVAATLSLAQAVESEAELTKVTTKVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICT 77
Query: 424 GEKGFG-------YKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTG 266
GEKG G YKG+ FHRIIP FM QGGD + NGTG SIYG F DENFK+ H+
Sbjct: 78 GEKGLGKSGKPLSYKGTPFHRIIPGFMIQGGDTVSGNGTGCDSIYGGMFPDENFKINHSA 137
Query: 265 PGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLGSKSGKPIK 86
PG+LSMAN +TNGSQFFITTV LD KHVVFG V+ GMDVV K+E GS+SG P
Sbjct: 138 PGLLSMANYAKDTNGSQFFITTVKLTRLDGKHVVFGKVLSGMDVVYKIEAEGSQSGTPRS 197
Query: 85 KVVISDSGD 59
KV+ISDSG+
Sbjct: 198 KVLISDSGE 206
>10_01_0309 + 3417602-3418147
Length = 181
Score = 202 bits (494), Expect = 2e-52
Identities = 97/175 (55%), Positives = 123/175 (70%), Gaps = 10/175 (5%)
Frame = -3
Query: 556 ASTQPDKQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKG-------FGYKG 398
AS++ + +V+ D+ GE +GR+VI+L D+VP TAENFR LCTGE+ YKG
Sbjct: 5 ASSKSNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKG 64
Query: 397 SSFHRIIPDFMCQGGDFTNHNGTGGKSIY---GRTFSDENFKLKHTGPGILSMANAGPNT 227
S+FHR++P FMCQGGD T NGTGG+S R F DE F +KH GPG++SMANAGPNT
Sbjct: 65 SAFHRVVPGFMCQGGDITAGNGTGGESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNT 124
Query: 226 NGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLGSKSGKPIKKVVISDSG 62
NGSQFFIT PWLD +HV FG VV GM V+ +++ G+ SGK +K VVI+D G
Sbjct: 125 NGSQFFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSGKTVKPVVITDCG 179
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 188 bits (457), Expect = 5e-48
Identities = 84/115 (73%), Positives = 95/115 (82%)
Frame = -3
Query: 541 DKQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMC 362
+ + +FDV GEP GRIVI L + VPKT +NFRALCTG+KG+GYKG SFHRII DFM
Sbjct: 65 NSKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRIIKDFMI 124
Query: 361 QGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTV 197
QGGDF N+NGTGG+SIYG F DENF LKHTGPG+LSMANAGP+TNGSQFFI TV
Sbjct: 125 QGGDFQNNNGTGGRSIYGECFDDENFTLKHTGPGVLSMANAGPDTNGSQFFICTV 179
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 178 bits (433), Expect = 4e-45
Identities = 97/183 (53%), Positives = 115/183 (62%), Gaps = 23/183 (12%)
Frame = -3
Query: 529 YFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGY------------------ 404
Y DV+ G+ GRIV++L P+TAENFRALCTGEKG
Sbjct: 36 YLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKISLKAASVC 95
Query: 403 ----KGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAG 236
KGS HRI+ FM QGGD T +GTGG+SIYG F DENF LKH G+LSMANAG
Sbjct: 96 TRWTKGSCIHRIVKGFMVQGGDITAGDGTGGESIYGLNFEDENFVLKHERKGMLSMANAG 155
Query: 235 PNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLG-SKSGKPIKKVVISDSGD 59
P+TNGSQFFITT TP LD KHVVFG V++GM VV+ ME + +S +PI +VI D G+
Sbjct: 156 PDTNGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVIVDCGE 215
Query: 58 YHE 50
E
Sbjct: 216 LPE 218
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 174 bits (423), Expect = 7e-44
Identities = 90/168 (53%), Positives = 111/168 (66%), Gaps = 10/168 (5%)
Frame = -3
Query: 532 VYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG--------YKGSSFHRII 377
V+ DV+ EP R+V +L D P+TAENFRALCTGE G G YKGS FHR+I
Sbjct: 9 VFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGSLFHRVI 68
Query: 376 PDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTV 197
FM QGGDF+N +G+GG+SIYG TF DENF L+H G+LSMANAGPNTNGSQFFIT
Sbjct: 69 KGFMAQGGDFSNGDGSGGESIYGGTFEDENFVLRHDERGLLSMANAGPNTNGSQFFITFK 128
Query: 196 PTPWLDRKHVVFGSVVEGMDVVQKME--KLGSKSGKPIKKVVISDSGD 59
LDRK VFG ++ G DV++++E + P+ V I D G+
Sbjct: 129 HNSRLDRKSTVFGKLILGNDVLKRIEYVDVHGAGSTPVVPVRIVDCGE 176
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 158 bits (383), Expect = 5e-39
Identities = 87/171 (50%), Positives = 109/171 (63%), Gaps = 8/171 (4%)
Frame = -3
Query: 535 QVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG-------YKGSSFHRII 377
+VY DV DG+ +GRIVI L D VPKT NFRALCTGE+G G YKGS FHRII
Sbjct: 39 RVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRII 98
Query: 376 PDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTV 197
P FM QGGD +G G +++MAN+GP++NGSQF+ITT+
Sbjct: 99 PGFMIQGGDIVRGDGKG---------------------SVIAMANSGPDSNGSQFYITTI 137
Query: 196 PTPWLDRKHVVFGSVVEGMDVVQKME-KLGSKSGKPIKKVVISDSGDYHEE 47
T WLD +HVVFG V++GMD V +E G+ +GKP KKVVI+DSG+ +E
Sbjct: 138 KTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKVVITDSGEIPKE 188
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 151 bits (367), Expect = 4e-37
Identities = 82/144 (56%), Positives = 99/144 (68%), Gaps = 2/144 (1%)
Frame = -3
Query: 499 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 320
+G I ++L +E PKT ENF C G+ Y FHR+I FM Q GD +GTGG+
Sbjct: 504 MGDIHLRLYPEECPKTVENFTTHC--RNGY-YDNLIFHRVIKGFMIQTGDPLG-DGTGGQ 559
Query: 319 SIYGRTFSDENFK-LKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEG 143
SI+GR F DE K L+H P LSMANAGPNTNGSQFFITTV TPWLD KH VFG VV+G
Sbjct: 560 SIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKG 619
Query: 142 MDVVQKMEKLGS-KSGKPIKKVVI 74
MDVVQ++EK+ + K+ KP + V I
Sbjct: 620 MDVVQQIEKVKTDKNDKPYQDVKI 643
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 123 bits (296), Expect(2) = 2e-36
Identities = 70/132 (53%), Positives = 79/132 (59%), Gaps = 24/132 (18%)
Frame = -3
Query: 532 VYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGE---KGF--GYKGSSFHRIIPDF 368
V+FDVT P GRI ++L D VPKTAENFR CTGE G GYKG FHR+I DF
Sbjct: 39 VFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGCQFHRVIKDF 98
Query: 367 MCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSM-------------------A 245
M QGGD+ +GTG SIYG F DENF KHTGPG+LSM A
Sbjct: 99 MIQGGDYMKGDGTGCTSIYGTKFDDENFIAKHTGPGLLSMVRSYYIYIKLEQDIEASSKA 158
Query: 244 NAGPNTNGSQFF 209
N+G N+NGSQ F
Sbjct: 159 NSGVNSNGSQIF 170
Score = 47.6 bits (108), Expect(2) = 2e-36
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Frame = -3
Query: 217 QFFITTVPTPWLDRKHVVFGSVV-EGMDVVQKMEKLGS-KSGKPIKKVVISDSGD 59
QFFIT WLD KHVVFG V+ +GM V+K+E + + + +P VIS+ G+
Sbjct: 200 QFFITCAKCEWLDNKHVVFGRVLGDGMLAVRKIENVATGPNNRPKLACVISECGE 254
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 144 bits (350), Expect = 5e-35
Identities = 72/124 (58%), Positives = 86/124 (69%), Gaps = 1/124 (0%)
Frame = -3
Query: 418 KGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANA 239
K F +GS FHR+I FM QGGD T +GTGG+SIYG F DENF LKH G+LSMAN+
Sbjct: 113 KIFHVQGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKGMLSMANS 172
Query: 238 GPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLG-SKSGKPIKKVVISDSG 62
GPNTNGSQFFITT TP LD KHVVFG V++GM VV+ +E ++ +P V I D G
Sbjct: 173 GPNTNGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSVEHAPVGEADRPTSDVEIVDCG 232
Query: 61 DYHE 50
+ E
Sbjct: 233 ELPE 236
Score = 62.5 bits (145), Expect = 3e-10
Identities = 42/95 (44%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Frame = -3
Query: 592 NGTIYSAAALRFASTQPDKQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKG 413
+ + SAAA P + + DV+ GE GRIVI+L VP+TAENFRALCTGEKG
Sbjct: 10 SAAVASAAAAEVEVKNP--RCFMDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKG 67
Query: 412 FG-YKGSSFHRIIPDFMCQGGDFTN-HNGTGGKSI 314
G G H DF DF N H+ T G+ +
Sbjct: 68 VGAVTGKHLH--YKDF---DADFINMHSETFGRLV 97
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 135 bits (327), Expect = 3e-32
Identities = 74/144 (51%), Positives = 93/144 (64%), Gaps = 2/144 (1%)
Frame = -3
Query: 499 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 320
+G I++ PKT NF L +G+ Y FHRII DF+ QGGD T G GG+
Sbjct: 18 MGAFTIEMYYKHAPKTCRNFLEL--SRRGY-YDNVIFHRIIKDFIVQGGDPTG-TGRGGE 73
Query: 319 SIYGRTFSDE-NFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEG 143
SIYG F DE +LKHTG GILSMANAGPNTNGSQFFIT P LD KH +FG V +G
Sbjct: 74 SIYGAKFEDEIRPELKHTGAGILSMANAGPNTNGSQFFITLAPCQSLDGKHTIFGRVSKG 133
Query: 142 MDVVQKMEKLGS-KSGKPIKKVVI 74
M++V+++ + + KS +PI +V I
Sbjct: 134 MEIVKRLGSVQTDKSDRPIHEVKI 157
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 126 bits (304), Expect = 2e-29
Identities = 68/143 (47%), Positives = 93/143 (65%), Gaps = 2/143 (1%)
Frame = -3
Query: 496 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 317
G + ++L+ D P+T ENF C E G+ Y G FHR I +FM QGGD T G+GG+S
Sbjct: 354 GDLNLELHCDITPRTCENFLTHC--ENGY-YNGLIFHRSIKNFMIQGGDPTG-TGSGGES 409
Query: 316 IYGRTFSDE-NFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGM 140
I+G+ F DE N KL H+G G++SMAN+GP+TNGSQFFI P L+ KH VFG VV G+
Sbjct: 410 IWGKPFKDELNSKLIHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFGMVVGGL 469
Query: 139 DVVQKMEKLG-SKSGKPIKKVVI 74
+ MEK+ +P++++ I
Sbjct: 470 TTLSAMEKVPVDDDDRPLEEIKI 492
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 126 bits (303), Expect = 2e-29
Identities = 68/142 (47%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Frame = -3
Query: 499 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 320
LG I ++ D+ P+TAENF ALC G+ Y G+ FHR I FM QGGD T G GG
Sbjct: 9 LGDIKCEVFCDQAPRTAENFLALCAS--GY-YDGTIFHRNIKGFMIQGGDPTG-TGKGGT 64
Query: 319 SIYGRTFSDE-NFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEG 143
SI+G+ F+DE LKH G++SMAN+GPNTNGSQFFIT P L+ + VF V+ G
Sbjct: 65 SIWGKKFADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAKQPHLNGHYTVFAKVIHG 124
Query: 142 MDVVQKMEKLGSKSG-KPIKKV 80
+V+ MEK + G +P+ ++
Sbjct: 125 FEVLDLMEKAQTGPGDRPLAEI 146
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 101 bits (243), Expect = 4e-22
Identities = 55/117 (47%), Positives = 77/117 (65%), Gaps = 2/117 (1%)
Frame = -3
Query: 496 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 317
G + I+L E PK NF LC +G+ Y G+ FHR+I F+ QGGD T +GTGG+S
Sbjct: 22 GPLDIELWPKEAPKAVRNFVQLCL--EGY-YDGTLFHRVIKSFLVQGGDPTG-SGTGGES 77
Query: 316 IYGRTFSDE-NFKLKHTGPGILSMANAG-PNTNGSQFFITTVPTPWLDRKHVVFGSV 152
IYG F+DE + +L+ G+++ ANAG P++NGSQFFI+ WLD+K+ +FG V
Sbjct: 78 IYGAPFADEFHTRLRFNHRGLVACANAGTPHSNGSQFFISLDRCDWLDKKNTIFGKV 134
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 95.9 bits (228), Expect = 3e-20
Identities = 62/152 (40%), Positives = 81/152 (53%), Gaps = 10/152 (6%)
Frame = -3
Query: 499 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 320
+G I + L+TD P T +NF LC K Y G FH++ DF+ Q GD T G GG
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLC---KMKYYNGCLFHKVEKDFLAQTGDPTG-TGAGGD 64
Query: 319 SIY-------GRTFSDE-NFKLKHTGPGILSMANAGPNTNGSQFFIT-TVPTPWLDRKHV 167
S+Y R F DE L+H+ G ++MA+AG N N SQF+IT +LD KH
Sbjct: 65 SVYKFLYGDQARFFDDEIRPDLRHSKKGTIAMASAGENCNASQFYITLRDDVDYLDDKHT 124
Query: 166 VFGSVVEGMDVVQKM-EKLGSKSGKPIKKVVI 74
VFG V EG D + K+ E G+P K + I
Sbjct: 125 VFGMVAEGFDTLTKISETYVDDKGRPFKDIRI 156
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 62.1 bits (144), Expect(2) = 1e-14
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = -3
Query: 307 RTFSDE-NFKLKHTGPGILSMANAGPNTNGSQFFITTVP-TPWLDRKHVVFGSVVEGMDV 134
R F DE + +L+H+ G ++MA+AG N N SQF+IT +LD KH VFG V EG D
Sbjct: 106 RFFDDEIHPELRHSKMGTIAMASAGENCNASQFYITLRDGVDYLDDKHTVFGMVAEGFDT 165
Query: 133 VQKM-EKLGSKSGKPIKKVVI 74
+ K+ E G+P K + I
Sbjct: 166 ITKINETYVDDKGRPFKDIRI 186
Score = 35.1 bits (77), Expect(2) = 1e-14
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -3
Query: 499 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPD--FMCQGGDFTNHNGTG 326
+G I + L+TD P T +NF LC G +G G +F + + + C+ G +
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLCKGNEGLVAGGLAFRKQLSGQFWRCRAGATGSGFDVK 68
Query: 325 GKSIYGRTF 299
G S G +F
Sbjct: 69 GMSFPGYSF 77
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 76.6 bits (180), Expect = 2e-14
Identities = 49/129 (37%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = -3
Query: 496 GRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKS 317
G I I++ D + F +LC K +KG F +I +F+ QGGDF + NG +
Sbjct: 103 GSITIEIYKDASADVVDRFVSLC---KSNHFKGMPFRHVIKNFVIQGGDF-DFNGAAQEW 158
Query: 316 IYGRTFSDEN-FKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGM 140
I S EN KH I + N PN G FITT P P L+ K VVFG V+ G
Sbjct: 159 ILKAKASGENALSPKHEAFMIGTTKN--PNNKGFDLFITTAPIPDLNDKLVVFGQVINGQ 216
Query: 139 DVVQKMEKL 113
D+VQ++E++
Sbjct: 217 DIVQEIEEV 225
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 64.9 bits (151), Expect = 6e-11
Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 8/66 (12%)
Frame = -3
Query: 532 VYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFG--------YKGSSFHRII 377
V+FD+ G RI +L D VPKT ENFRALCTGE+G G +KG++ HRI+
Sbjct: 10 VFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLGVSTQKPLYFKGTNMHRIL 69
Query: 376 PDFMCQ 359
FM Q
Sbjct: 70 KGFMAQ 75
Score = 48.4 bits (110), Expect = 6e-06
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 6/52 (11%)
Frame = -3
Query: 196 PTPWLD------RKHVVFGSVVEGMDVVQKMEKLGSKSGKPIKKVVISDSGD 59
PTP+L+ KHVVFG VV GM +++K+E +GS +GKP +V I D G+
Sbjct: 81 PTPFLNVSTSCVSKHVVFGKVVTGMPLLKKLEAVGSDTGKPTCEVKIVDCGE 132
>08_02_0053 + 11721658-11721689,11721960-11722710
Length = 260
Score = 60.5 bits (140), Expect = 1e-09
Identities = 44/141 (31%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Frame = -3
Query: 511 DGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNG 332
D EPLGR++ L +P T NF+A CT Y+G+ H+++ G
Sbjct: 123 DSEPLGRVIFGLYGRLLPLTTANFKAACTSA---AYRGTLVHKLLQGQFFVAGRQGPRRD 179
Query: 331 TG------GKSIYGRTFSDENFKLKHTGPGILSMA----------NAGPNTNGSQFFITT 200
G G T + F+LKH PG LS+ PN + +F +TT
Sbjct: 180 RGEVQPPTGLVRNAETIDPKAFELKHARPGTLSLCLGQNDDDDDIKLNPNYHNVEFLVTT 239
Query: 199 --VPTPWLDRKHVVFGSVVEG 143
P P LD +++VFG+V+EG
Sbjct: 240 GPGPCPELDGQNIVFGTVLEG 260
>02_01_0086 + 613113-613532
Length = 139
Score = 58.0 bits (134), Expect = 7e-09
Identities = 43/122 (35%), Positives = 57/122 (46%)
Frame = -3
Query: 484 IKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGR 305
++L D VP TAENFRAL T +K YKG + P +G + R
Sbjct: 1 MELYADLVPLTAENFRALYT-KKPLHYKGLCLSQHYPRIHVEGRRLRQGPWHRRRVHLRR 59
Query: 304 TFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQK 125
+ENF L H P + N N SQFF T V PW D +VVFG ++ G ++
Sbjct: 60 HLPNENFLLPHDRPW---LPNGSAENNISQFF-TRV--PWFDGNYVVFGCIISGFHNLKA 113
Query: 124 ME 119
+E
Sbjct: 114 IE 115
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -2
Query: 434 SVYW*KRFWVQGFIIS*NNTRLHVSRWRFYQSQRYRRKVYLRAYL 300
++Y K +G +S + R+HV R Q +RR+V+LR +L
Sbjct: 17 ALYTKKPLHYKGLCLSQHYPRIHVEGRRLRQGPWHRRRVHLRRHL 61
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 50.4 bits (115), Expect = 1e-06
Identities = 58/179 (32%), Positives = 74/179 (41%), Gaps = 27/179 (15%)
Frame = -3
Query: 577 SAAALRFASTQPDKQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTG----EKGF 410
+AAA A + + DV+ GEP GRI I L D P A F +L TG K F
Sbjct: 62 AAAAPCIADLPVTAKAFLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVTGVGYRRKEF 121
Query: 409 -----GYK---GSSFHRIIPDFMCQ------------GGDFTNHNGTGGKSIYGRTFSDE 290
GY G + IP + GG+ + H G SI R S
Sbjct: 122 VKIVPGYVQHGGVVSYPAIPAVTERLAAEMGAVRAQCGGERSPHAAAGAVSIVVRDPSLP 181
Query: 289 NFKLKHTGPG---ILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKM 122
K K G + G NG++F ITT P LD +V G VV+GMDV+ K+
Sbjct: 182 PPKPKLVARGGKLEVDQEQVGVVPNGTEFVITTGDAPELDASALVVGRVVDGMDVLGKI 240
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Frame = -3
Query: 280 LKHTGPGILSMA-NAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVQKMEKLGSK 104
+KH GILSM ++ PN+ GS F I P LD ++ VFG + +G D ++K+E+L ++
Sbjct: 157 VKHVR-GILSMGRHSDPNSGGSSFSILLGDAPHLDGQYAVFGRLTKGDDTLRKLEQLPTR 215
Query: 103 SG----KPIKKVVISDSGDYHEELILKSAD 26
PI+++ I + Y+ ++ L+S +
Sbjct: 216 REGIFVMPIERISILST--YYYDVDLESCE 243
>10_01_0310 + 3425099-3425218
Length = 39
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3
Query: 496 GRIVIKLNTDEVPKTAENFRALCTG 422
G +VI+ D+VPKT ENFR +CTG
Sbjct: 8 GSVVIEQFADKVPKTTENFRPMCTG 32
>06_01_0675 +
4937309-4937354,4937606-4937718,4937810-4937905,
4938003-4938059,4938145-4938300,4938402-4938486,
4938727-4938817,4938896-4939060,4939150-4939345,
4939593-4939731,4940187-4941874,4942575-4942765,
4942850-4942994
Length = 1055
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 520 HRNKLVYQVESKQNEVLQQSILSH 591
H+++L+ Q+ K E+LQQ IL H
Sbjct: 673 HQSQLIQQLSQKSQEILQQQILQH 696
>03_04_0032 -
16663018-16663026,16663072-16663235,16663384-16663517,
16664300-16664393,16667458-16667566,16668441-16668489,
16668622-16668647
Length = 194
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +2
Query: 452 SFRYFIRVQFYDYTSQWLSVSSYIEINLFIRLSRSKTKCCSRVYCPID*SSPKH*YRYHD 631
+ R +R+ + ++WL+V++ N L + + C+ CPI + PK+ YR+ D
Sbjct: 41 NLREAVRLPIGEDLNEWLAVNTVDFFNQVNFLYGTLMEFCTSSTCPIMSAGPKYEYRWAD 100
>04_01_0437 + 5704279-5704788,5705133-5705207
Length = 194
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = -3
Query: 592 NGTIYSAAALRFASTQPDKQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKG 413
NG++ S A +RF Y D A PL VI++N D + + A +G +G
Sbjct: 41 NGSLTSTALVRF---------YLDRVARLNPLLHAVIEVNPDALAQAARADAERASGRRG 91
Query: 412 FG 407
FG
Sbjct: 92 FG 93
>01_04_0023 -
15167281-15167906,15168217-15168390,15169648-15169907,
15170024-15170085
Length = 373
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 541 DKQVYFDVTADGEPLGRIVIK-LNTDEVPKTAENFRALCTGEKGFGYKGSSFH 386
DKQV V+ DG+ L + L T+E+P ++FR G+ G H
Sbjct: 121 DKQVTPQVSHDGQVLEFAPPRRLKTEEIPNIVDDFRIAARNAIEAGFDGVEIH 173
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,479,402
Number of Sequences: 37544
Number of extensions: 420215
Number of successful extensions: 1031
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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