Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte12d05
         (718 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-295|AAZ66050.1|  495|Drosophila melanogaster CG18170-PB...    33   0.39 
AE014296-294|AAZ66049.1|  495|Drosophila melanogaster CG18170-PA...    33   0.39 
X04705-1|CAA28410.1|  644|Drosophila melanogaster protein ( Dros...    31   1.2  
M69216-2|AAA51465.1|  661|Drosophila melanogaster HFL1 protein.        31   1.2  
AY034617-1|AAK57748.1|  631|Drosophila melanogaster tyramine rec...    30   2.7  
AE014297-2406|AAF55463.1|  631|Drosophila melanogaster CG7431-PA...    30   2.7  

>AE014296-295|AAZ66050.1|  495|Drosophila melanogaster CG18170-PB,
           isoform B protein.
          Length = 495

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 28/92 (30%), Positives = 43/92 (46%)
 Frame = -1

Query: 628 MNDMTSIVSNTKAGFPSTEXRTNKANCSNKIHQNTISKYVWNISTSSRAFQSCDETAVSC 449
           +ND+  I  N K        +T K + + K+ +NT  K   N  T+ R F+  +E  +  
Sbjct: 373 INDIDDIAINEKLSESIEPVKTKKDSKTPKLLENTPKKKPKNFKTALRVFKP-EEKVIPK 431

Query: 448 SSNMSQPSNVTTLERINDLDFIDIKLNNLKTE 353
           S NM  PS+      ++ LD    KL+  KTE
Sbjct: 432 SDNM--PSSNIKPNPVSKLD--KSKLSKPKTE 459


>AE014296-294|AAZ66049.1|  495|Drosophila melanogaster CG18170-PA,
           isoform A protein.
          Length = 495

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 28/92 (30%), Positives = 43/92 (46%)
 Frame = -1

Query: 628 MNDMTSIVSNTKAGFPSTEXRTNKANCSNKIHQNTISKYVWNISTSSRAFQSCDETAVSC 449
           +ND+  I  N K        +T K + + K+ +NT  K   N  T+ R F+  +E  +  
Sbjct: 373 INDIDDIAINEKLSESIEPVKTKKDSKTPKLLENTPKKKPKNFKTALRVFKP-EEKVIPK 431

Query: 448 SSNMSQPSNVTTLERINDLDFIDIKLNNLKTE 353
           S NM  PS+      ++ LD    KL+  KTE
Sbjct: 432 SDNM--PSSNIKPNPVSKLD--KSKLSKPKTE 459


>X04705-1|CAA28410.1|  644|Drosophila melanogaster protein (
           Drosophila transposableelement hobo 108. ).
          Length = 644

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
 Frame = -1

Query: 673 TEENFTLQLTDVLNEMN----DMTSIVSNTKAGFPSTEXRTNKANCSNKIHQNTISKYVW 506
           T EN  +++  + +E N    D    V++  A          + NCS+ +  N + K   
Sbjct: 268 TAENILMKIKGLFSEFNVENIDNVKFVTDRGANIKKALEGNTRLNCSSHLLSNVLEKSFN 327

Query: 505 NISTSSRAFQSCDETAVSCSSNMSQPSNVTTLE 407
             +   +  +SC +    C  +  Q +  TTL+
Sbjct: 328 EANELKKIVKSCKKIVKYCKKSNLQHTLETTLK 360


>M69216-2|AAA51465.1|  661|Drosophila melanogaster HFL1 protein.
          Length = 661

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
 Frame = -1

Query: 673 TEENFTLQLTDVLNEMN----DMTSIVSNTKAGFPSTEXRTNKANCSNKIHQNTISKYVW 506
           T EN  +++  + +E N    D    V++  A          + NCS+ +  N + K   
Sbjct: 271 TAENILMKIKGLFSEFNVENIDNVKFVTDRGANIKKALEGNTRLNCSSHLLSNVLEKSFN 330

Query: 505 NISTSSRAFQSCDETAVSCSSNMSQPSNVTTLE 407
             +   +  +SC +    C  +  Q +  TTL+
Sbjct: 331 EANELKKIVKSCKKIVKYCKKSNLQHTLETTLK 363


>AY034617-1|AAK57748.1|  631|Drosophila melanogaster tyramine
           receptor protein.
          Length = 631

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
 Frame = +3

Query: 513 YLDIVF*W---ILLEQFALFVLXSVDGNPAFVLDTILVISFISLRTSVNCKVKFSSVTSM 683
           + D+V  W   IL+  FA F++ +V GN   +L    +++   LRT  NC V   +V  +
Sbjct: 107 FYDLVLSWQGIILIAVFATFIVVTVIGNTLVIL---AILTTRRLRTITNCFVMSLAVADL 163

Query: 684 SLSV 695
            + +
Sbjct: 164 LVGI 167


>AE014297-2406|AAF55463.1|  631|Drosophila melanogaster CG7431-PA
           protein.
          Length = 631

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
 Frame = +3

Query: 513 YLDIVF*W---ILLEQFALFVLXSVDGNPAFVLDTILVISFISLRTSVNCKVKFSSVTSM 683
           + D+V  W   IL+  FA F++ +V GN   +L    +++   LRT  NC V   +V  +
Sbjct: 107 FYDLVLSWQGIILIAVFATFIVVTVIGNTLVIL---AILTTRRLRTITNCFVMSLAVADL 163

Query: 684 SLSV 695
            + +
Sbjct: 164 LVGI 167


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,550,834
Number of Sequences: 53049
Number of extensions: 572552
Number of successful extensions: 1396
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1396
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)