Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte12d04
         (296 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023814-1|AAZ66321.1|  181|Drosophila melanogaster LP22840p pro...    26   9.7  
AY060247-1|AAL25286.1|  181|Drosophila melanogaster GH07105p pro...    26   9.7  
AE014296-3588|AAF51753.1|  276|Drosophila melanogaster CG11307-P...    26   9.7  
AE014296-3587|AAG22183.1|  276|Drosophila melanogaster CG11307-P...    26   9.7  
AE014134-860|ABC65876.1|  325|Drosophila melanogaster CG31919-PE...    26   9.7  
AE014134-859|AAN10525.1|  325|Drosophila melanogaster CG31919-PD...    26   9.7  
AE014134-858|AAF52208.3|  325|Drosophila melanogaster CG31919-PC...    26   9.7  
AE014134-857|AAN10524.1|  325|Drosophila melanogaster CG31919-PB...    26   9.7  

>BT023814-1|AAZ66321.1|  181|Drosophila melanogaster LP22840p
           protein.
          Length = 181

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 292 CHLNTHPARQRLRQMPIDR 236
           CH  T PA+Q L  M  DR
Sbjct: 11  CHKQTQPAQQTLSDMDFDR 29


>AY060247-1|AAL25286.1|  181|Drosophila melanogaster GH07105p
           protein.
          Length = 181

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 292 CHLNTHPARQRLRQMPIDR 236
           CH  T PA+Q L  M  DR
Sbjct: 11  CHKQTQPAQQTLSDMDFDR 29


>AE014296-3588|AAF51753.1|  276|Drosophila melanogaster CG11307-PB,
           isoform B protein.
          Length = 276

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 161 EELCNRSAHSISPIDNDRSSVA 226
           EELCN S HS +      SS++
Sbjct: 2   EELCNNSGHSATSSSGSNSSIS 23


>AE014296-3587|AAG22183.1|  276|Drosophila melanogaster CG11307-PA,
           isoform A protein.
          Length = 276

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 161 EELCNRSAHSISPIDNDRSSVA 226
           EELCN S HS +      SS++
Sbjct: 2   EELCNNSGHSATSSSGSNSSIS 23


>AE014134-860|ABC65876.1|  325|Drosophila melanogaster CG31919-PE,
           isoform E protein.
          Length = 325

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 292 CHLNTHPARQRLRQMPIDR 236
           CH  T PA+Q L  M  DR
Sbjct: 155 CHKQTQPAQQTLSDMDFDR 173


>AE014134-859|AAN10525.1|  325|Drosophila melanogaster CG31919-PD,
           isoform D protein.
          Length = 325

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 292 CHLNTHPARQRLRQMPIDR 236
           CH  T PA+Q L  M  DR
Sbjct: 155 CHKQTQPAQQTLSDMDFDR 173


>AE014134-858|AAF52208.3|  325|Drosophila melanogaster CG31919-PC,
           isoform C protein.
          Length = 325

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 292 CHLNTHPARQRLRQMPIDR 236
           CH  T PA+Q L  M  DR
Sbjct: 155 CHKQTQPAQQTLSDMDFDR 173


>AE014134-857|AAN10524.1|  325|Drosophila melanogaster CG31919-PB,
           isoform B protein.
          Length = 325

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 292 CHLNTHPARQRLRQMPIDR 236
           CH  T PA+Q L  M  DR
Sbjct: 155 CHKQTQPAQQTLSDMDFDR 173


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,917,369
Number of Sequences: 53049
Number of extensions: 173123
Number of successful extensions: 369
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 527894775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)