Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte12d03
         (767 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    27   0.84 
AY344822-1|AAR02433.1|  257|Anopheles gambiae CP5039 protein.          26   1.5  
AY344821-1|AAR02432.1|  257|Anopheles gambiae CP5039 protein.          26   1.5  
AY344820-1|AAR02431.1|  257|Anopheles gambiae CP5039 protein.          26   1.5  
AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.          26   1.5  
AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.          26   1.5  
AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.          26   1.5  
AY344816-1|AAR02427.1|  257|Anopheles gambiae CP5039 protein.          26   1.5  
AY344815-1|AAR02426.1|  257|Anopheles gambiae CP5039 protein.          26   1.5  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    24   4.5  

>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 26.6 bits (56), Expect = 0.84
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -1

Query: 593 ATALAFYYVIYCYMQLIYYTLRSALYFHNADGAMKVTIAVVTFTSLLVG 447
           A    F+ +  C+  +I Y+  +  + HN      +  ++ TFTSLL G
Sbjct: 330 AVTQCFFSLSICFGNIIMYSSYNK-FRHNVYRDATIVTSIDTFTSLLAG 377


>AY344822-1|AAR02433.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 378 NEVLY*FSSQYSDQSLHSNNQIETNE 455
           N VL+ FSS   +Q+LH+   +E N+
Sbjct: 85  NTVLFLFSSNSDNQNLHTTFTVERNK 110


>AY344821-1|AAR02432.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 378 NEVLY*FSSQYSDQSLHSNNQIETNE 455
           N VL+ FSS   +Q+LH+   +E N+
Sbjct: 85  NTVLFLFSSNSDNQNLHTTFTVERNK 110


>AY344820-1|AAR02431.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 378 NEVLY*FSSQYSDQSLHSNNQIETNE 455
           N VL+ FSS   +Q+LH+   +E N+
Sbjct: 85  NTVLFLFSSNSDNQNLHTTFTVERNK 110


>AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 378 NEVLY*FSSQYSDQSLHSNNQIETNE 455
           N VL+ FSS   +Q+LH+   +E N+
Sbjct: 85  NTVLFLFSSNSDNQNLHTTFTVERNK 110


>AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 378 NEVLY*FSSQYSDQSLHSNNQIETNE 455
           N VL+ FSS   +Q+LH+   +E N+
Sbjct: 85  NTVLFLFSSNSDNQNLHTTFTVERNK 110


>AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 378 NEVLY*FSSQYSDQSLHSNNQIETNE 455
           N VL+ FSS   +Q+LH+   +E N+
Sbjct: 85  NTVLFLFSSNSDNQNLHTTFTVERNK 110


>AY344816-1|AAR02427.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 378 NEVLY*FSSQYSDQSLHSNNQIETNE 455
           N VL+ FSS   +Q+LH+   +E N+
Sbjct: 85  NTVLFLFSSNSDNQNLHTTFTVERNK 110


>AY344815-1|AAR02426.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 378 NEVLY*FSSQYSDQSLHSNNQIETNE 455
           N VL+ FSS   +Q+LH+   +E N+
Sbjct: 85  NTVLFLFSSNSDNQNLHTTFTVERNK 110


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 462 CKSHNCYCNLHGSISVMEIQCASQSIVY 545
           C+  +C   LH S  VME+      ++Y
Sbjct: 475 CEETSCAYGLHNSFQVMELVSVFGPLIY 502


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,698
Number of Sequences: 2352
Number of extensions: 13461
Number of successful extensions: 24
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)