Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12c19
(392 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113572-1|AAM29577.1| 90|Drosophila melanogaster RH19679p pro... 40 9e-04
AE014296-2905|AAF49346.2| 90|Drosophila melanogaster CG7630-PA... 40 9e-04
AY060385-1|AAL25424.1| 194|Drosophila melanogaster LD28933p pro... 29 1.7
AE014296-2575|AAF49581.1| 192|Drosophila melanogaster CG6151-PB... 29 1.7
AE014296-2574|AAN11768.1| 157|Drosophila melanogaster CG6151-PC... 29 1.7
AE014296-2573|AAN11767.1| 194|Drosophila melanogaster CG6151-PA... 29 1.7
DQ191319-1|ABB80264.1| 495|Drosophila melanogaster p53 protein ... 27 6.7
DQ191318-1|ABB80263.1| 495|Drosophila melanogaster p53 protein ... 27 6.7
BT001357-1|AAN71112.1| 519|Drosophila melanogaster AT28346p pro... 27 6.7
AY069096-1|AAL39241.1| 385|Drosophila melanogaster GH11591p pro... 27 6.7
AF263722-1|AAF75270.1| 385|Drosophila melanogaster transcriptio... 27 6.7
AF250918-1|AAF74277.1| 385|Drosophila melanogaster transcriptio... 27 6.7
AF244918-1|AAF61572.1| 385|Drosophila melanogaster p53 tumor su... 27 6.7
AF224714-1|AAF40428.1| 385|Drosophila melanogaster transcriptio... 27 6.7
AF224713-1|AAF40427.1| 385|Drosophila melanogaster transcriptio... 27 6.7
AF192555-1|AAL56639.1| 385|Drosophila melanogaster p53-like reg... 27 6.7
AE014297-3260|AAF56087.2| 385|Drosophila melanogaster CG33336-P... 27 6.7
AE014297-3259|AAN13925.2| 495|Drosophila melanogaster CG33336-P... 27 6.7
BT001564-1|AAN71319.1| 578|Drosophila melanogaster RE16347p pro... 27 8.9
AY058736-1|AAL13965.1| 312|Drosophila melanogaster LP02557p pro... 27 8.9
AY051476-1|AAK92900.1| 260|Drosophila melanogaster GH14032p pro... 27 8.9
AE014298-1917|AAF48284.2| 312|Drosophila melanogaster CG32631-P... 27 8.9
AE014134-2582|AAF53447.2| 578|Drosophila melanogaster CG31732-P... 27 8.9
AE014134-2578|AAF53449.4| 890|Drosophila melanogaster CG31732-P... 27 8.9
>AY113572-1|AAM29577.1| 90|Drosophila melanogaster RH19679p
protein.
Length = 90
Score = 40.3 bits (90), Expect = 9e-04
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -3
Query: 219 MNELPVPCGPWEPWYKDMQSYYNKVLVIGVAWFAFSFGMMIYTESLYLNFSPP 61
MN+LPVP G W+ + + YN L+ G+ A + G + + ++ N+ P
Sbjct: 34 MNDLPVPAGDWKEQHSQKNAKYNAALITGILVLAGTIGFVKSSGIIHFNYYAP 86
>AE014296-2905|AAF49346.2| 90|Drosophila melanogaster CG7630-PA
protein.
Length = 90
Score = 40.3 bits (90), Expect = 9e-04
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -3
Query: 219 MNELPVPCGPWEPWYKDMQSYYNKVLVIGVAWFAFSFGMMIYTESLYLNFSPP 61
MN+LPVP G W+ + + YN L+ G+ A + G + + ++ N+ P
Sbjct: 34 MNDLPVPAGDWKEQHSQKNAKYNAALITGILVLAGTIGFVKSSGIIHFNYYAP 86
>AY060385-1|AAL25424.1| 194|Drosophila melanogaster LD28933p
protein.
Length = 194
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 201 PCGPWEPWYKDMQSYYNKVLVIGVAWFAFSFGM 103
P GP +PWY Y +++L I A+FA FG+
Sbjct: 19 PIGPEQPWY---LKYGSRLLGIVAAFFAILFGL 48
>AE014296-2575|AAF49581.1| 192|Drosophila melanogaster CG6151-PB,
isoform B protein.
Length = 192
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 201 PCGPWEPWYKDMQSYYNKVLVIGVAWFAFSFGM 103
P GP +PWY Y +++L I A+FA FG+
Sbjct: 19 PIGPEQPWY---LKYGSRLLGIVAAFFAILFGL 48
>AE014296-2574|AAN11768.1| 157|Drosophila melanogaster CG6151-PC,
isoform C protein.
Length = 157
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 201 PCGPWEPWYKDMQSYYNKVLVIGVAWFAFSFGM 103
P GP +PWY Y +++L I A+FA FG+
Sbjct: 19 PIGPEQPWY---LKYGSRLLGIVAAFFAILFGL 48
>AE014296-2573|AAN11767.1| 194|Drosophila melanogaster CG6151-PA,
isoform A protein.
Length = 194
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 201 PCGPWEPWYKDMQSYYNKVLVIGVAWFAFSFGM 103
P GP +PWY Y +++L I A+FA FG+
Sbjct: 19 PIGPEQPWY---LKYGSRLLGIVAAFFAILFGL 48
>DQ191319-1|ABB80264.1| 495|Drosophila melanogaster p53 protein
long form variant 2 protein.
Length = 495
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 27 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 125
L R V R GL + L+ F C +SC RK+T
Sbjct: 315 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 347
>DQ191318-1|ABB80263.1| 495|Drosophila melanogaster p53 protein
long form variant 1 protein.
Length = 495
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 27 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 125
L R V R GL + L+ F C +SC RK+T
Sbjct: 315 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 347
>BT001357-1|AAN71112.1| 519|Drosophila melanogaster AT28346p
protein.
Length = 519
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 27 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 125
L R V R GL + L+ F C +SC RK+T
Sbjct: 339 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 371
>AY069096-1|AAL39241.1| 385|Drosophila melanogaster GH11591p
protein.
Length = 385
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 27 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 125
L R V R GL + L+ F C +SC RK+T
Sbjct: 205 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 237
>AF263722-1|AAF75270.1| 385|Drosophila melanogaster transcription
factor p53 protein.
Length = 385
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 27 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 125
L R V R GL + L+ F C +SC RK+T
Sbjct: 205 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 237
>AF250918-1|AAF74277.1| 385|Drosophila melanogaster transcription
factor protein.
Length = 385
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 27 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 125
L R V R GL + L+ F C +SC RK+T
Sbjct: 205 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 237
>AF244918-1|AAF61572.1| 385|Drosophila melanogaster p53 tumor
suppressor-like protein protein.
Length = 385
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 27 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 125
L R V R GL + L+ F C +SC RK+T
Sbjct: 205 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 237
>AF224714-1|AAF40428.1| 385|Drosophila melanogaster transcription
factor p53 protein.
Length = 385
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 27 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 125
L R V R GL + L+ F C +SC RK+T
Sbjct: 205 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 237
>AF224713-1|AAF40427.1| 385|Drosophila melanogaster transcription
factor p53 protein.
Length = 385
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 27 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 125
L R V R GL + L+ F C +SC RK+T
Sbjct: 205 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 237
>AF192555-1|AAL56639.1| 385|Drosophila melanogaster p53-like
regulator of apoptosisand cell cycle protein.
Length = 385
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 27 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 125
L R V R GL + L+ F C +SC RK+T
Sbjct: 205 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 237
>AE014297-3260|AAF56087.2| 385|Drosophila melanogaster CG33336-PA,
isoform A protein.
Length = 385
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 27 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 125
L R V R GL + L+ F C +SC RK+T
Sbjct: 205 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 237
>AE014297-3259|AAN13925.2| 495|Drosophila melanogaster CG33336-PB,
isoform B protein.
Length = 495
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 27 LQPCRLVDRVGLVARNLSTNFPCISSCRMRKQT 125
L R V R GL + L+ F C +SC RK+T
Sbjct: 315 LNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKET 347
>BT001564-1|AAN71319.1| 578|Drosophila melanogaster RE16347p
protein.
Length = 578
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 108 GMMIYTESLYLNFSPPAQ--PGPPSDMVEECEDIEP 7
G ++ +S+ LN S PA P PPS + C ++P
Sbjct: 7 GFVLDAKSMGLNPSRPASSPPPPPSSASQMCRQVQP 42
>AY058736-1|AAL13965.1| 312|Drosophila melanogaster LP02557p
protein.
Length = 312
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 78 LNFSPPAQPGPPSDMVEECEDIEPM 4
LN +PP QP PP ++ + ++P+
Sbjct: 80 LNVNPPLQPLPPLQQLQPLQPLQPI 104
>AY051476-1|AAK92900.1| 260|Drosophila melanogaster GH14032p
protein.
Length = 260
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 108 GMMIYTESLYLNFSPPAQ--PGPPSDMVEECEDIEP 7
G ++ +S+ LN S PA P PPS + C ++P
Sbjct: 7 GFVLDAKSMGLNPSRPASSPPPPPSSASQMCRQVQP 42
>AE014298-1917|AAF48284.2| 312|Drosophila melanogaster CG32631-PA
protein.
Length = 312
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 78 LNFSPPAQPGPPSDMVEECEDIEPM 4
LN +PP QP PP ++ + ++P+
Sbjct: 80 LNVNPPLQPLPPLQQLQPLQPLQPI 104
>AE014134-2582|AAF53447.2| 578|Drosophila melanogaster CG31732-PC,
isoform C protein.
Length = 578
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 108 GMMIYTESLYLNFSPPAQ--PGPPSDMVEECEDIEP 7
G ++ +S+ LN S PA P PPS + C ++P
Sbjct: 7 GFVLDAKSMGLNPSRPASSPPPPPSSASQMCRQVQP 42
>AE014134-2578|AAF53449.4| 890|Drosophila melanogaster CG31732-PB,
isoform B protein.
Length = 890
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 108 GMMIYTESLYLNFSPPAQ--PGPPSDMVEECEDIEP 7
G ++ +S+ LN S PA P PPS + C ++P
Sbjct: 7 GFVLDAKSMGLNPSRPASSPPPPPSSASQMCRQVQP 42
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,037,425
Number of Sequences: 53049
Number of extensions: 360621
Number of successful extensions: 1002
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1107890535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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