Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12c02
(808 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050356-1|AAH50356.2| 192|Homo sapiens RNF212 protein protein. 49 2e-05
BC101260-1|AAI01261.1| 297|Homo sapiens RNF212 protein protein. 48 3e-05
BC101259-1|AAI01260.1| 232|Homo sapiens ring finger protein 212... 48 3e-05
BC101258-1|AAI01259.1| 232|Homo sapiens ring finger protein 212... 48 3e-05
AK096160-1|BAC04714.1| 232|Homo sapiens protein ( Homo sapiens ... 48 3e-05
BC101261-1|AAI01262.1| 123|Homo sapiens RNF212 protein protein. 46 2e-04
BC045671-1|AAH45671.1| 412|Homo sapiens chromosome 2 open readi... 34 0.69
AC013403-7|AAX93171.1| 412|Homo sapiens unknown protein. 34 0.69
BC036250-1|AAH36250.2| 280|Homo sapiens RNF212 protein protein. 33 0.92
D26155-1|BAA05142.1| 1572|Homo sapiens transcriptional activator... 32 2.8
AC007192-1|AAD22670.1| 681|Homo sapiens KIAA0561 protein [AA 62... 32 2.8
AB011133-1|BAA25487.1| 1308|Homo sapiens KIAA0561 protein protein. 32 2.8
X86096-1|CAA60050.2| 413|Homo sapiens transcription factor prot... 31 3.7
U15641-1|AAC50119.1| 413|Homo sapiens E2F-4 protein. 31 3.7
S75174-1|AAB32597.1| 416|Homo sapiens E2F-4 protein. 31 3.7
BC033180-1|AAH33180.1| 413|Homo sapiens E2F transcription facto... 31 3.7
AF527540-1|AAM77918.1| 413|Homo sapiens E2F transcription facto... 31 3.7
AF250378-1|AAF65226.1| 413|Homo sapiens E2F transcription facto... 31 3.7
X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein. 31 4.9
X55666-1|CAA39201.1| 310|Homo sapiens upstream stimulatory fact... 31 4.9
BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix... 31 4.9
BC035505-1|AAH35505.1| 310|Homo sapiens upstream transcription ... 31 4.9
AY593992-1|AAS89301.1| 310|Homo sapiens upstream transcription ... 31 4.9
AY157990-1|AAN76325.1| 1778|Homo sapiens myeloid/lymphoid or mix... 31 4.9
AY147037-1|AAN17675.1| 1858|Homo sapiens MLL5 protein. 31 4.9
AL591806-9|CAI15371.1| 282|Homo sapiens upstream transcription ... 31 4.9
AL591806-8|CAI15372.1| 310|Homo sapiens upstream transcription ... 31 4.9
AL449266-5|CAI14354.1| 836|Homo sapiens chromosome 1 open readi... 31 4.9
AL359076-4|CAI12968.1| 1572|Homo sapiens SWI/SNF related, matrix... 31 4.9
AL359076-3|CAI12967.1| 1590|Homo sapiens SWI/SNF related, matrix... 31 4.9
AL138755-9|CAI14600.1| 1572|Homo sapiens SWI/SNF related, matrix... 31 4.9
AL138755-8|CAI14599.1| 1590|Homo sapiens SWI/SNF related, matrix... 31 4.9
AK024088-1|BAB14821.1| 589|Homo sapiens protein ( Homo sapiens ... 31 4.9
AF519459-1|AAM74947.1| 1858|Homo sapiens MLL5 protein. 31 4.9
AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein. 31 4.9
AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein. 31 4.9
AF007190-1|AAC02268.1| 513|Homo sapiens intestinal mucin protein. 31 4.9
AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related matrix-... 31 4.9
AB098540-1|BAC78384.1| 251|Homo sapiens upstream stimulatory fa... 31 4.9
AB017568-1|BAA76541.1| 310|Homo sapiens USF1 protein. 31 4.9
X68829-1|CAA48723.1| 327|Homo sapiens MDCR15 protein protein. 31 6.5
X68149-1|CAA48252.1| 372|Homo sapiens Burkitt lymphoma receptor... 31 6.5
EF064770-1|ABK41953.1| 372|Homo sapiens Burkitt lymphoma recept... 31 6.5
BC110352-1|AAI10353.1| 372|Homo sapiens Burkitt lymphoma recept... 31 6.5
BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein. 30 8.6
AC093748-1|AAY40983.1| 443|Homo sapiens unknown protein. 30 8.6
>BC050356-1|AAH50356.2| 192|Homo sapiens RNF212 protein protein.
Length = 192
Score = 48.8 bits (111), Expect = 2e-05
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Frame = -2
Query: 804 KDSTCLVCRMPCSAMKLVPDMKQEIQDYFTDPEELIKK----SCDVIQFQRQHRRRLLSY 637
K + CL+C+ PC + L +IQ +F + L KK + +++FQ +HR+RLL+
Sbjct: 38 KKNECLICKAPCRTVLLSKHTDADIQAFFMSIDSLCKKYSRETSQILEFQEKHRKRLLA- 96
Query: 636 LLQSTKKFYAARNELKRVTEMCQKQHTQLKEYHKRIKALETQLAN-QSSRQVSPFNIPIS 460
FY R ++ R+ E +K Q+++ + +T + +SS P +
Sbjct: 97 -------FY--REKISRLEESLRKSVLQIEQLQSMRSSQQTAFSTIKSSVSTKPHGCLLQ 147
Query: 459 P 457
P
Sbjct: 148 P 148
>BC101260-1|AAI01261.1| 297|Homo sapiens RNF212 protein protein.
Length = 297
Score = 48.4 bits (110), Expect = 3e-05
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Frame = -2
Query: 804 KDSTCLVCRMPCSAMKLVPDMKQEIQDYFTDPEELIKK----SCDVIQFQRQHRRRLLSY 637
K + CL+C+ PC + L +IQ +F + L KK + +++FQ +HR+RLL+
Sbjct: 38 KKNECLICKAPCRTVLLSKHTDADIQAFFMSIDSLCKKYSRETSQILEFQEKHRKRLLA- 96
Query: 636 LLQSTKKFYAARNELKRVTEMCQKQHTQLKEYHKRIKALETQLAN-QSSRQVSPFNIPIS 460
FY R ++ R+ E +K Q+++ + +T + +SS P +
Sbjct: 97 -------FY--REKISRLEESLRKSVLQIEQLQSMRSSQQTAFSTIKSSVSTKPHGCLLP 147
Query: 459 P 457
P
Sbjct: 148 P 148
>BC101259-1|AAI01260.1| 232|Homo sapiens ring finger protein 212
protein.
Length = 232
Score = 48.4 bits (110), Expect = 3e-05
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Frame = -2
Query: 804 KDSTCLVCRMPCSAMKLVPDMKQEIQDYFTDPEELIKK----SCDVIQFQRQHRRRLLSY 637
K + CL+C+ PC + L +IQ +F + L KK + +++FQ +HR+RLL+
Sbjct: 38 KKNECLICKAPCRTVLLSKHTDADIQAFFMSIDSLCKKYSRETSQILEFQEKHRKRLLA- 96
Query: 636 LLQSTKKFYAARNELKRVTEMCQKQHTQLKEYHKRIKALETQLAN-QSSRQVSPFNIPIS 460
FY R ++ R+ E +K Q+++ + +T + +SS P +
Sbjct: 97 -------FY--REKISRLEESLRKSVLQIEQLQSMRSSQQTAFSTIKSSVSTKPHGCLLP 147
Query: 459 P 457
P
Sbjct: 148 P 148
>BC101258-1|AAI01259.1| 232|Homo sapiens ring finger protein 212
protein.
Length = 232
Score = 48.4 bits (110), Expect = 3e-05
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Frame = -2
Query: 804 KDSTCLVCRMPCSAMKLVPDMKQEIQDYFTDPEELIKK----SCDVIQFQRQHRRRLLSY 637
K + CL+C+ PC + L +IQ +F + L KK + +++FQ +HR+RLL+
Sbjct: 38 KKNECLICKAPCRTVLLSKHTDADIQAFFMSIDSLCKKYSRETSQILEFQEKHRKRLLA- 96
Query: 636 LLQSTKKFYAARNELKRVTEMCQKQHTQLKEYHKRIKALETQLAN-QSSRQVSPFNIPIS 460
FY R ++ R+ E +K Q+++ + +T + +SS P +
Sbjct: 97 -------FY--REKISRLEESLRKSVLQIEQLQSMRSSQQTAFSTIKSSVSTKPHGCLLP 147
Query: 459 P 457
P
Sbjct: 148 P 148
>AK096160-1|BAC04714.1| 232|Homo sapiens protein ( Homo sapiens
cDNA FLJ38841 fis, clone MESAN2003529. ).
Length = 232
Score = 48.4 bits (110), Expect = 3e-05
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Frame = -2
Query: 804 KDSTCLVCRMPCSAMKLVPDMKQEIQDYFTDPEELIKK----SCDVIQFQRQHRRRLLSY 637
K + CL+C+ PC + L +IQ +F + L KK + +++FQ +HR+RLL+
Sbjct: 38 KKNECLICKAPCRTVLLSKHTDADIQAFFMSIDSLCKKYSRETSQILEFQEKHRKRLLA- 96
Query: 636 LLQSTKKFYAARNELKRVTEMCQKQHTQLKEYHKRIKALETQLAN-QSSRQVSPFNIPIS 460
FY R ++ R+ E +K Q+++ + +T + +SS P +
Sbjct: 97 -------FY--REKISRLEESLRKSVLQIEQLQSMRSSQQTAFSTIKSSVSTKPHGCLLP 147
Query: 459 P 457
P
Sbjct: 148 P 148
>BC101261-1|AAI01262.1| 123|Homo sapiens RNF212 protein protein.
Length = 123
Score = 46.0 bits (104), Expect = 2e-04
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Frame = -2
Query: 804 KDSTCLVCRMPCSAMKLVPDMKQEIQDYFTDPEELIKK----SCDVIQFQRQHRRRLLSY 637
K + CL+C+ PC + L +IQ +F + L KK + +++FQ +HR+RLL++
Sbjct: 38 KKNECLICKAPCRTVLLSKHTDADIQAFFMSIDSLCKKYSRETSQILEFQEKHRKRLLAF 97
>BC045671-1|AAH45671.1| 412|Homo sapiens chromosome 2 open reading
frame 53 protein.
Length = 412
Score = 33.9 bits (74), Expect = 0.69
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -2
Query: 468 PISPTNNISPSFI-QTTPSCKRPTKSTPYSTHHYQSNLLTPSRISKQRSANFSAHS--QK 298
P SP+ SP+F Q S RP S+P + Y S LTPS Q + HS Q
Sbjct: 86 PYSPSLPSSPTFFHQNYLSLPRPRASSPSNHWLYPSPPLTPSFSPSQPQNSSLPHSPCQS 145
Query: 297 SNTSNKISSTVFTPPTP 247
+ ++ S+ T P P
Sbjct: 146 PSHPEELHSSTLTSPGP 162
>AC013403-7|AAX93171.1| 412|Homo sapiens unknown protein.
Length = 412
Score = 33.9 bits (74), Expect = 0.69
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -2
Query: 468 PISPTNNISPSFI-QTTPSCKRPTKSTPYSTHHYQSNLLTPSRISKQRSANFSAHS--QK 298
P SP+ SP+F Q S RP S+P + Y S LTPS Q + HS Q
Sbjct: 86 PYSPSLPSSPTFFHQNYLSLPRPRASSPSNHWLYPSPPLTPSFSPSQPQNSSLPHSPCQS 145
Query: 297 SNTSNKISSTVFTPPTP 247
+ ++ S+ T P P
Sbjct: 146 PSHPEELHSSTLTSPGP 162
>BC036250-1|AAH36250.2| 280|Homo sapiens RNF212 protein protein.
Length = 280
Score = 33.5 bits (73), Expect = 0.92
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 804 KDSTCLVCRMPCSAMKLVPDMKQEIQDYFTDPEELIKK-SCDVIQFQRQHR 655
K + CL+C+ PC + L +IQ +F + L KK S + Q+ R R
Sbjct: 38 KKNECLICKAPCRTVLLSKHTDADIQAFFMSIDSLCKKYSRETSQYLRLSR 88
>D26155-1|BAA05142.1| 1572|Homo sapiens transcriptional activator
hSNF2a protein.
Length = 1572
Score = 31.9 bits (69), Expect = 2.8
Identities = 29/107 (27%), Positives = 49/107 (45%)
Frame = -2
Query: 741 KQEIQDYFTDPEELIKKSCDVIQFQRQHRRRLLSYLLQSTKKFYAARNELKRVTEMCQKQ 562
K+ ++ + EE +K D Q++ RR L+YLLQ T ++ A N V E Q Q
Sbjct: 500 KERMRRLMAEDEESYRKLID----QKKDRR--LAYLLQQTDEYVA--NLTNLVWEHKQAQ 551
Query: 561 HTQLKEYHKRIKALETQLANQSSRQVSPFNIPISPTNNISPSFIQTT 421
+ K+ +R K + A + P PI ++ +S ++ T
Sbjct: 552 AAKEKKKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVT 598
>AC007192-1|AAD22670.1| 681|Homo sapiens KIAA0561 protein [AA
628-1308] protein.
Length = 681
Score = 31.9 bits (69), Expect = 2.8
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = -2
Query: 609 AARNELKRVTEMCQKQHTQLKEYHKRIKALETQLANQSSRQ---VSPFNIPISPTNNISP 439
A R++ R E ++ + K+ K+ L T + S S ++P SPT+++SP
Sbjct: 429 ARRSKRSRRRETQDRRKSLFKKISKQTSVLHTSRSFSSGLHHSLSSSESLPGSPTHSLSP 488
Query: 438 SFIQTTPSCKRPTKSTPYST 379
S TTP C+ P P T
Sbjct: 489 S--PTTP-CRSPAPDVPADT 505
>AB011133-1|BAA25487.1| 1308|Homo sapiens KIAA0561 protein protein.
Length = 1308
Score = 31.9 bits (69), Expect = 2.8
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = -2
Query: 609 AARNELKRVTEMCQKQHTQLKEYHKRIKALETQLANQSSRQ---VSPFNIPISPTNNISP 439
A R++ R E ++ + K+ K+ L T + S S ++P SPT+++SP
Sbjct: 1056 ARRSKRSRRRETQDRRKSLFKKISKQTSVLHTSRSFSSGLHHSLSSSESLPGSPTHSLSP 1115
Query: 438 SFIQTTPSCKRPTKSTPYST 379
S TTP C+ P P T
Sbjct: 1116 S--PTTP-CRSPAPDVPADT 1132
>X86096-1|CAA60050.2| 413|Homo sapiens transcription factor
protein.
Length = 413
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Frame = -2
Query: 549 KEYHKRIKA----LETQLANQSSRQVSPFNIPISPTNNI--SPSFIQTTPSCKRPTKSTP 388
K+Y +K+ +E L N+ + P +P+ P ++ SPS + T P +P +
Sbjct: 177 KKYQIHLKSVSGPIEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQS 236
Query: 387 YSTHHYQSNLLTPSRI 340
S LTP+ +
Sbjct: 237 QEASRPNSPQLTPTAV 252
>U15641-1|AAC50119.1| 413|Homo sapiens E2F-4 protein.
Length = 413
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Frame = -2
Query: 549 KEYHKRIKA----LETQLANQSSRQVSPFNIPISPTNNI--SPSFIQTTPSCKRPTKSTP 388
K+Y +K+ +E L N+ + P +P+ P ++ SPS + T P +P +
Sbjct: 177 KKYQIHLKSVSGPIEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQS 236
Query: 387 YSTHHYQSNLLTPSRI 340
S LTP+ +
Sbjct: 237 QEASRPNSPQLTPTAV 252
>S75174-1|AAB32597.1| 416|Homo sapiens E2F-4 protein.
Length = 416
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Frame = -2
Query: 549 KEYHKRIKA----LETQLANQSSRQVSPFNIPISPTNNI--SPSFIQTTPSCKRPTKSTP 388
K+Y +K+ +E L N+ + P +P+ P ++ SPS + T P +P +
Sbjct: 177 KKYQIHLKSVSGPIEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQS 236
Query: 387 YSTHHYQSNLLTPSRI 340
S LTP+ +
Sbjct: 237 QEASRPNSPQLTPTAV 252
>BC033180-1|AAH33180.1| 413|Homo sapiens E2F transcription factor
4, p107/p130-binding protein.
Length = 413
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Frame = -2
Query: 549 KEYHKRIKA----LETQLANQSSRQVSPFNIPISPTNNI--SPSFIQTTPSCKRPTKSTP 388
K+Y +K+ +E L N+ + P +P+ P ++ SPS + T P +P +
Sbjct: 177 KKYQIHLKSVSGPIEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQS 236
Query: 387 YSTHHYQSNLLTPSRI 340
S LTP+ +
Sbjct: 237 QEASRPNSPQLTPTAV 252
>AF527540-1|AAM77918.1| 413|Homo sapiens E2F transcription factor
4, p107/p130-binding protein.
Length = 413
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Frame = -2
Query: 549 KEYHKRIKA----LETQLANQSSRQVSPFNIPISPTNNI--SPSFIQTTPSCKRPTKSTP 388
K+Y +K+ +E L N+ + P +P+ P ++ SPS + T P +P +
Sbjct: 177 KKYQIHLKSVSGPIEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQS 236
Query: 387 YSTHHYQSNLLTPSRI 340
S LTP+ +
Sbjct: 237 QEASRPNSPQLTPTAV 252
>AF250378-1|AAF65226.1| 413|Homo sapiens E2F transcription factor 4
protein.
Length = 413
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Frame = -2
Query: 549 KEYHKRIKA----LETQLANQSSRQVSPFNIPISPTNNI--SPSFIQTTPSCKRPTKSTP 388
K+Y +K+ +E L N+ + P +P+ P ++ SPS + T P +P +
Sbjct: 177 KKYQIHLKSVSGPIEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQS 236
Query: 387 YSTHHYQSNLLTPSRI 340
S LTP+ +
Sbjct: 237 QEASRPNSPQLTPTAV 252
>X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein.
Length = 1586
Score = 31.1 bits (67), Expect = 4.9
Identities = 29/107 (27%), Positives = 49/107 (45%)
Frame = -2
Query: 741 KQEIQDYFTDPEELIKKSCDVIQFQRQHRRRLLSYLLQSTKKFYAARNELKRVTEMCQKQ 562
K+ ++ + EE +K D Q++ RR L+YLLQ T ++ A N V E Q Q
Sbjct: 496 KERMRRLMAEDEEGYRKLID----QKKDRR--LAYLLQQTDEYVA--NLTNLVWEHKQAQ 547
Query: 561 HTQLKEYHKRIKALETQLANQSSRQVSPFNIPISPTNNISPSFIQTT 421
+ K+ +R K + A + P PI ++ +S ++ T
Sbjct: 548 AAKEKKKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVT 594
>X55666-1|CAA39201.1| 310|Homo sapiens upstream stimulatory factor
protein.
Length = 310
Score = 31.1 bits (67), Expect = 4.9
Identities = 24/89 (26%), Positives = 39/89 (43%)
Frame = -2
Query: 759 KLVPDMKQEIQDYFTDPEELIKKSCDVIQFQRQHRRRLLSYLLQSTKKFYAARNELKRVT 580
K++PD E ++ K+CD IQ RQ R LS LQ + + L++
Sbjct: 224 KIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHR-LSEELQGLDQLQLDNDVLRQQV 282
Query: 579 EMCQKQHTQLKEYHKRIKALETQLANQSS 493
E + ++ L+ R LE + N S+
Sbjct: 283 EDLKNKNLLLRA-QLRHHGLEVVIKNDSN 310
>BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1647
Score = 31.1 bits (67), Expect = 4.9
Identities = 27/100 (27%), Positives = 47/100 (47%)
Frame = -2
Query: 741 KQEIQDYFTDPEELIKKSCDVIQFQRQHRRRLLSYLLQSTKKFYAARNELKRVTEMCQKQ 562
K+ ++ + EE +K D Q++ +R L+YLLQ T ++ A EL R + Q
Sbjct: 524 KERMRRLMAEDEEGYRKLID----QKKDKR--LAYLLQQTDEYVANLTELVRQHKAAQ-- 575
Query: 561 HTQLKEYHKRIKALETQLANQSSRQVSPFNIPISPTNNIS 442
KE K+ K + + A + + P P+ T+ +S
Sbjct: 576 --VAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMS 613
>BC035505-1|AAH35505.1| 310|Homo sapiens upstream transcription
factor 1 protein.
Length = 310
Score = 31.1 bits (67), Expect = 4.9
Identities = 24/89 (26%), Positives = 39/89 (43%)
Frame = -2
Query: 759 KLVPDMKQEIQDYFTDPEELIKKSCDVIQFQRQHRRRLLSYLLQSTKKFYAARNELKRVT 580
K++PD E ++ K+CD IQ RQ R LS LQ + + L++
Sbjct: 224 KIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHR-LSEELQGLDQLQLDNDVLRQQV 282
Query: 579 EMCQKQHTQLKEYHKRIKALETQLANQSS 493
E + ++ L+ R LE + N S+
Sbjct: 283 EDLKNKNLLLRA-QLRHHGLEVVIKNDSN 310
>AY593992-1|AAS89301.1| 310|Homo sapiens upstream transcription
factor 1 protein.
Length = 310
Score = 31.1 bits (67), Expect = 4.9
Identities = 24/89 (26%), Positives = 39/89 (43%)
Frame = -2
Query: 759 KLVPDMKQEIQDYFTDPEELIKKSCDVIQFQRQHRRRLLSYLLQSTKKFYAARNELKRVT 580
K++PD E ++ K+CD IQ RQ R LS LQ + + L++
Sbjct: 224 KIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHR-LSEELQGLDQLQLDNDVLRQQV 282
Query: 579 EMCQKQHTQLKEYHKRIKALETQLANQSS 493
E + ++ L+ R LE + N S+
Sbjct: 283 EDLKNKNLLLRA-QLRHHGLEVVIKNDSN 310
>AY157990-1|AAN76325.1| 1778|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia 5 protein.
Length = 1778
Score = 31.1 bits (67), Expect = 4.9
Identities = 42/140 (30%), Positives = 60/140 (42%), Gaps = 17/140 (12%)
Frame = -2
Query: 627 STKKFYAARNELKRVTEMCQKQHTQLKEYHKRIKALETQLANQSSR--QVSP-----FNI 469
ST A N + TE+ QKQ + + + +T + N S + Q P +
Sbjct: 1302 STVSASEAENGVHLKTELQQKQLSNNNQALSKNHPPQTHVRNSSEQLSQKLPSVPTKLHC 1361
Query: 468 PISP-TNNISPSFIQTTP------SCKRPTKS--TPYSTHHYQS-NLLTPSRISKQRSAN 319
P SP N S TP S K P++ +PY HH QS + TP R QR+
Sbjct: 1362 PPSPHLENPPKSSTPHTPVQHGYLSPKPPSQQLGSPYRPHHSQSPQVGTPQR-EPQRNFY 1420
Query: 318 FSAHSQKSNTSNKISSTVFT 259
+A + +NT S T+FT
Sbjct: 1421 PAAQNLPANTQQATSGTLFT 1440
>AY147037-1|AAN17675.1| 1858|Homo sapiens MLL5 protein.
Length = 1858
Score = 31.1 bits (67), Expect = 4.9
Identities = 42/140 (30%), Positives = 60/140 (42%), Gaps = 17/140 (12%)
Frame = -2
Query: 627 STKKFYAARNELKRVTEMCQKQHTQLKEYHKRIKALETQLANQSSR--QVSP-----FNI 469
ST A N + TE+ QKQ + + + +T + N S + Q P +
Sbjct: 1382 STVSASEAENGVHLKTELQQKQLSNNNQALSKNHPPQTHVRNSSEQLSQKLPSVPTKLHC 1441
Query: 468 PISP-TNNISPSFIQTTP------SCKRPTKS--TPYSTHHYQS-NLLTPSRISKQRSAN 319
P SP N S TP S K P++ +PY HH QS + TP R QR+
Sbjct: 1442 PPSPHLENPPKSSTPHTPVQHGYLSPKPPSQQLGSPYRPHHSQSPQVGTPQR-EPQRNFY 1500
Query: 318 FSAHSQKSNTSNKISSTVFT 259
+A + +NT S T+FT
Sbjct: 1501 PAAQNLPANTQQATSGTLFT 1520
>AL591806-9|CAI15371.1| 282|Homo sapiens upstream transcription
factor 1 protein.
Length = 282
Score = 31.1 bits (67), Expect = 4.9
Identities = 24/89 (26%), Positives = 39/89 (43%)
Frame = -2
Query: 759 KLVPDMKQEIQDYFTDPEELIKKSCDVIQFQRQHRRRLLSYLLQSTKKFYAARNELKRVT 580
K++PD E ++ K+CD IQ RQ R LS LQ + + L++
Sbjct: 196 KIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHR-LSEELQGLDQLQLDNDVLRQQV 254
Query: 579 EMCQKQHTQLKEYHKRIKALETQLANQSS 493
E + ++ L+ R LE + N S+
Sbjct: 255 EDLKNKNLLLRA-QLRHHGLEVVIKNDSN 282
>AL591806-8|CAI15372.1| 310|Homo sapiens upstream transcription
factor 1 protein.
Length = 310
Score = 31.1 bits (67), Expect = 4.9
Identities = 24/89 (26%), Positives = 39/89 (43%)
Frame = -2
Query: 759 KLVPDMKQEIQDYFTDPEELIKKSCDVIQFQRQHRRRLLSYLLQSTKKFYAARNELKRVT 580
K++PD E ++ K+CD IQ RQ R LS LQ + + L++
Sbjct: 224 KIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHR-LSEELQGLDQLQLDNDVLRQQV 282
Query: 579 EMCQKQHTQLKEYHKRIKALETQLANQSS 493
E + ++ L+ R LE + N S+
Sbjct: 283 EDLKNKNLLLRA-QLRHHGLEVVIKNDSN 310
>AL449266-5|CAI14354.1| 836|Homo sapiens chromosome 1 open reading
frame 62 protein.
Length = 836
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = -2
Query: 573 CQKQHTQLKEYHKRIKALETQLANQSSRQVSPFNIPISPTNNISPSFIQTTPSCKRPTKS 394
C+K+ T KE+H R +N S R + + N SPSF++ C + S
Sbjct: 680 CRKEPT--KEFHYRYNTPGQNYSNHSKRGAFVQPHSLDESKNSSPSFLKPKRICSQRVNS 737
Query: 393 TPYSTHH 373
+ H
Sbjct: 738 KSFKGEH 744
>AL359076-4|CAI12968.1| 1572|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1572
Score = 31.1 bits (67), Expect = 4.9
Identities = 29/107 (27%), Positives = 49/107 (45%)
Frame = -2
Query: 741 KQEIQDYFTDPEELIKKSCDVIQFQRQHRRRLLSYLLQSTKKFYAARNELKRVTEMCQKQ 562
K+ ++ + EE +K D Q++ RR L+YLLQ T ++ A N V E Q Q
Sbjct: 500 KERMRRLMAEDEEGYRKLID----QKKDRR--LAYLLQQTDEYVA--NLTNLVWEHKQAQ 551
Query: 561 HTQLKEYHKRIKALETQLANQSSRQVSPFNIPISPTNNISPSFIQTT 421
+ K+ +R K + A + P PI ++ +S ++ T
Sbjct: 552 AAKEKKKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVT 598
>AL359076-3|CAI12967.1| 1590|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1590
Score = 31.1 bits (67), Expect = 4.9
Identities = 29/107 (27%), Positives = 49/107 (45%)
Frame = -2
Query: 741 KQEIQDYFTDPEELIKKSCDVIQFQRQHRRRLLSYLLQSTKKFYAARNELKRVTEMCQKQ 562
K+ ++ + EE +K D Q++ RR L+YLLQ T ++ A N V E Q Q
Sbjct: 500 KERMRRLMAEDEEGYRKLID----QKKDRR--LAYLLQQTDEYVA--NLTNLVWEHKQAQ 551
Query: 561 HTQLKEYHKRIKALETQLANQSSRQVSPFNIPISPTNNISPSFIQTT 421
+ K+ +R K + A + P PI ++ +S ++ T
Sbjct: 552 AAKEKKKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVT 598
>AL138755-9|CAI14600.1| 1572|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1572
Score = 31.1 bits (67), Expect = 4.9
Identities = 29/107 (27%), Positives = 49/107 (45%)
Frame = -2
Query: 741 KQEIQDYFTDPEELIKKSCDVIQFQRQHRRRLLSYLLQSTKKFYAARNELKRVTEMCQKQ 562
K+ ++ + EE +K D Q++ RR L+YLLQ T ++ A N V E Q Q
Sbjct: 500 KERMRRLMAEDEEGYRKLID----QKKDRR--LAYLLQQTDEYVA--NLTNLVWEHKQAQ 551
Query: 561 HTQLKEYHKRIKALETQLANQSSRQVSPFNIPISPTNNISPSFIQTT 421
+ K+ +R K + A + P PI ++ +S ++ T
Sbjct: 552 AAKEKKKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVT 598
>AL138755-8|CAI14599.1| 1590|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1590
Score = 31.1 bits (67), Expect = 4.9
Identities = 29/107 (27%), Positives = 49/107 (45%)
Frame = -2
Query: 741 KQEIQDYFTDPEELIKKSCDVIQFQRQHRRRLLSYLLQSTKKFYAARNELKRVTEMCQKQ 562
K+ ++ + EE +K D Q++ RR L+YLLQ T ++ A N V E Q Q
Sbjct: 500 KERMRRLMAEDEEGYRKLID----QKKDRR--LAYLLQQTDEYVA--NLTNLVWEHKQAQ 551
Query: 561 HTQLKEYHKRIKALETQLANQSSRQVSPFNIPISPTNNISPSFIQTT 421
+ K+ +R K + A + P PI ++ +S ++ T
Sbjct: 552 AAKEKKKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVT 598
>AK024088-1|BAB14821.1| 589|Homo sapiens protein ( Homo sapiens
cDNA FLJ14026 fis, clone HEMBA1003679, weakly similar to
SIALIDASE (EC 3.2.1.18). ).
Length = 589
Score = 31.1 bits (67), Expect = 4.9
Identities = 42/140 (30%), Positives = 60/140 (42%), Gaps = 17/140 (12%)
Frame = -2
Query: 627 STKKFYAARNELKRVTEMCQKQHTQLKEYHKRIKALETQLANQSSR--QVSP-----FNI 469
ST A N + TE+ QKQ + + + +T + N S + Q P +
Sbjct: 437 STVSASEAENGVHLKTELQQKQLSNNNQALSKNHPPQTHVRNSSEQLSQKLPSVPTKLHC 496
Query: 468 PISP-TNNISPSFIQTTP------SCKRPTKS--TPYSTHHYQS-NLLTPSRISKQRSAN 319
P SP N S TP S K P++ +PY HH QS + TP R QR+
Sbjct: 497 PPSPHLENPPKSSTPHTPVQHGYLSPKPPSQQLGSPYRPHHSQSPQVGTPQR-EPQRNFY 555
Query: 318 FSAHSQKSNTSNKISSTVFT 259
+A + +NT S T+FT
Sbjct: 556 PAAQNLPANTQQATSGTLFT 575
>AF519459-1|AAM74947.1| 1858|Homo sapiens MLL5 protein.
Length = 1858
Score = 31.1 bits (67), Expect = 4.9
Identities = 42/140 (30%), Positives = 60/140 (42%), Gaps = 17/140 (12%)
Frame = -2
Query: 627 STKKFYAARNELKRVTEMCQKQHTQLKEYHKRIKALETQLANQSSR--QVSP-----FNI 469
ST A N + TE+ QKQ + + + +T + N S + Q P +
Sbjct: 1382 STVSASEAENGVHLKTELQQKQLSNNNQALSKNHPPQTHVRNSSEQLSQKLPSVPTKLHC 1441
Query: 468 PISP-TNNISPSFIQTTP------SCKRPTKS--TPYSTHHYQS-NLLTPSRISKQRSAN 319
P SP N S TP S K P++ +PY HH QS + TP R QR+
Sbjct: 1442 PPSPHLENPPKSSTPHTPVQHGYLSPKPPSQQLGSPYRPHHSQSPQVGTPQR-EPQRNFY 1500
Query: 318 FSAHSQKSNTSNKISSTVFT 259
+A + +NT S T+FT
Sbjct: 1501 PAAQNLPANTQQATSGTLFT 1520
>AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein.
Length = 1647
Score = 31.1 bits (67), Expect = 4.9
Identities = 27/100 (27%), Positives = 47/100 (47%)
Frame = -2
Query: 741 KQEIQDYFTDPEELIKKSCDVIQFQRQHRRRLLSYLLQSTKKFYAARNELKRVTEMCQKQ 562
K+ ++ + EE +K D Q++ +R L+YLLQ T ++ A EL R + Q
Sbjct: 524 KERMRRLMAEDEEGYRKLID----QKKDKR--LAYLLQQTDEYVANLTELVRQHKAAQ-- 575
Query: 561 HTQLKEYHKRIKALETQLANQSSRQVSPFNIPISPTNNIS 442
KE K+ K + + A + + P P+ T+ +S
Sbjct: 576 --VAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMS 613
>AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein.
Length = 1679
Score = 31.1 bits (67), Expect = 4.9
Identities = 27/100 (27%), Positives = 47/100 (47%)
Frame = -2
Query: 741 KQEIQDYFTDPEELIKKSCDVIQFQRQHRRRLLSYLLQSTKKFYAARNELKRVTEMCQKQ 562
K+ ++ + EE +K D Q++ +R L+YLLQ T ++ A EL R + Q
Sbjct: 524 KERMRRLMAEDEEGYRKLID----QKKDKR--LAYLLQQTDEYVANLTELVRQHKAAQ-- 575
Query: 561 HTQLKEYHKRIKALETQLANQSSRQVSPFNIPISPTNNIS 442
KE K+ K + + A + + P P+ T+ +S
Sbjct: 576 --VAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMS 613
>AF007190-1|AAC02268.1| 513|Homo sapiens intestinal mucin protein.
Length = 513
Score = 31.1 bits (67), Expect = 4.9
Identities = 35/119 (29%), Positives = 48/119 (40%), Gaps = 8/119 (6%)
Frame = -2
Query: 582 TEMCQKQHTQLKEYHKRIKALETQLANQSSRQVSPFNIPISPTNNISPSFIQTTPSCK-R 406
TEM T + L T + S S P SPT+ +S S + T S
Sbjct: 50 TEMITSHTTNTTPLSTLVTTLLTTITR--STPTSETTYPTSPTSIVSDSTTEITYSTSIT 107
Query: 405 PTKSTPYSTHHYQSNL-------LTPSRISKQRSANFSAHSQKSNTSNKISSTVFTPPT 250
T ST + S+L +TP+ + N ++HS S TS+ I STV T T
Sbjct: 108 GTLSTATTLPPTSSSLPTTETATMTPTTTLITTTPNTTSHSTPSFTSSTIYSTVSTSTT 166
>AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
a4 var protein.
Length = 1164
Score = 31.1 bits (67), Expect = 4.9
Identities = 27/100 (27%), Positives = 47/100 (47%)
Frame = -2
Query: 741 KQEIQDYFTDPEELIKKSCDVIQFQRQHRRRLLSYLLQSTKKFYAARNELKRVTEMCQKQ 562
K+ ++ + EE +K D Q++ +R L+YLLQ T ++ A EL R + Q
Sbjct: 481 KERMRRLMAEDEEGYRKLID----QKKDKR--LAYLLQQTDEYVANLTELVRQHKAAQ-- 532
Query: 561 HTQLKEYHKRIKALETQLANQSSRQVSPFNIPISPTNNIS 442
KE K+ K + + A + + P P+ T+ +S
Sbjct: 533 --VAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMS 570
>AB098540-1|BAC78384.1| 251|Homo sapiens upstream stimulatory
factor 1 BD protein.
Length = 251
Score = 31.1 bits (67), Expect = 4.9
Identities = 24/89 (26%), Positives = 39/89 (43%)
Frame = -2
Query: 759 KLVPDMKQEIQDYFTDPEELIKKSCDVIQFQRQHRRRLLSYLLQSTKKFYAARNELKRVT 580
K++PD E ++ K+CD IQ RQ R LS LQ + + L++
Sbjct: 165 KIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHR-LSEELQGLDQLQLDNDVLRQQV 223
Query: 579 EMCQKQHTQLKEYHKRIKALETQLANQSS 493
E + ++ L+ R LE + N S+
Sbjct: 224 EDLKNKNLLLRA-QLRHHGLEVVIKNDSN 251
>AB017568-1|BAA76541.1| 310|Homo sapiens USF1 protein.
Length = 310
Score = 31.1 bits (67), Expect = 4.9
Identities = 24/89 (26%), Positives = 39/89 (43%)
Frame = -2
Query: 759 KLVPDMKQEIQDYFTDPEELIKKSCDVIQFQRQHRRRLLSYLLQSTKKFYAARNELKRVT 580
K++PD E ++ K+CD IQ RQ R LS LQ + + L++
Sbjct: 224 KIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHR-LSEELQGLDQLQLDNDVLRQQV 282
Query: 579 EMCQKQHTQLKEYHKRIKALETQLANQSS 493
E + ++ L+ R LE + N S+
Sbjct: 283 EDLKNKNLLLRA-QLRHHGLEVVIKNDSN 310
>X68829-1|CAA48723.1| 327|Homo sapiens MDCR15 protein protein.
Length = 327
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 531 FFCGTLLIACVAFDTFQS--HASVHCVPRKTFLSIVI 635
F+C +LL+AC+A D + + HA VH + LSI I
Sbjct: 88 FYCSSLLLACIAVDRYLAIVHA-VHAYRHRRLLSIHI 123
>X68149-1|CAA48252.1| 372|Homo sapiens Burkitt lymphoma receptor 1
protein.
Length = 372
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 531 FFCGTLLIACVAFDTFQS--HASVHCVPRKTFLSIVI 635
F+C +LL+AC+A D + + HA VH + LSI I
Sbjct: 133 FYCSSLLLACIAVDRYLAIVHA-VHAYRHRRLLSIHI 168
>EF064770-1|ABK41953.1| 372|Homo sapiens Burkitt lymphoma receptor
1, GTP binding protein (chemokine (C-X-C motif) recep
protein.
Length = 372
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 531 FFCGTLLIACVAFDTFQS--HASVHCVPRKTFLSIVI 635
F+C +LL+AC+A D + + HA VH + LSI I
Sbjct: 133 FYCSSLLLACIAVDRYLAIVHA-VHAYRHRRLLSIHI 168
>BC110352-1|AAI10353.1| 372|Homo sapiens Burkitt lymphoma receptor
1, GTP binding protein (chemokine (C-X-C motif) recep
protein.
Length = 372
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 531 FFCGTLLIACVAFDTFQS--HASVHCVPRKTFLSIVI 635
F+C +LL+AC+A D + + HA VH + LSI I
Sbjct: 133 FYCSSLLLACIAVDRYLAIVHA-VHAYRHRRLLSIHI 168
>BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein.
Length = 257
Score = 30.3 bits (65), Expect = 8.6
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = -2
Query: 495 SRQVSPFNIPISPTNNISP--SFIQTTPSCKRPTKSTPYSTHHYQSNLLTPSRISKQRSA 322
S + +IP S +++ SP S ++PS + S S+ + + S S S+
Sbjct: 47 SSSILSSSIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSPSSS 106
Query: 321 NFSAHSQKSNTSNKISSTVFTPPTPES 241
N S+ S S+ S+ SS+ +P + S
Sbjct: 107 NSSSSSSSSSPSSSSSSSSSSPSSSSS 133
>AC093748-1|AAY40983.1| 443|Homo sapiens unknown protein.
Length = 443
Score = 30.3 bits (65), Expect = 8.6
Identities = 23/86 (26%), Positives = 39/86 (45%)
Frame = -2
Query: 540 HKRIKALETQLANQSSRQVSPFNIPISPTNNISPSFIQTTPSCKRPTKSTPYSTHHYQSN 361
H + L++ + S+ + S P + SP+ + TPS + STP ST +S+
Sbjct: 33 HSECRVLKSSYSRSSAVKYSGSKSPGPSRRSKSPASVNGTPSSQ---LSTPKST---KSS 86
Query: 360 LLTPSRISKQRSANFSAHSQKSNTSN 283
+P+ R SAH + S+ N
Sbjct: 87 SSSPTSPGSFRGLKISAHGRSSSNVN 112
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,229,264
Number of Sequences: 237096
Number of extensions: 2083152
Number of successful extensions: 5981
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 5547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5956
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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