Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12b22
(740 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075574-1|AAL68379.1| 980|Drosophila melanogaster SD04405p pro... 44 2e-04
AE014298-775|AAF46062.3| 980|Drosophila melanogaster CG3160-PA ... 44 2e-04
AE014296-3156|AAF49157.1| 728|Drosophila melanogaster CG9472-PA... 33 0.54
BT023782-1|AAZ41791.1| 779|Drosophila melanogaster LD11946p pro... 31 2.2
AE014298-1023|AAN09205.1| 965|Drosophila melanogaster CG9650-PC... 31 2.2
AE014298-1022|AAN09204.1| 979|Drosophila melanogaster CG9650-PB... 31 2.2
AE014298-1021|AAF46246.3| 807|Drosophila melanogaster CG9650-PA... 31 2.2
U15220-1|AAA61796.1| 1051|Drosophila melanogaster gp150 protein ... 30 3.8
BT015195-1|AAT94424.1| 1076|Drosophila melanogaster RE72245p pro... 30 3.8
BT011025-1|AAR30185.1| 1051|Drosophila melanogaster RE46351p pro... 30 3.8
AY029705-1|AAK39644.1| 1051|Drosophila melanogaster leucine rich... 30 3.8
AE013599-3379|AAG22195.1| 1051|Drosophila melanogaster CG5820-PC... 30 3.8
AE013599-3378|AAM68222.1| 1051|Drosophila melanogaster CG5820-PB... 30 3.8
AE013599-3377|AAF46831.1| 1051|Drosophila melanogaster CG5820-PA... 30 3.8
AE013599-3376|AAM68221.1| 1076|Drosophila melanogaster CG5820-PD... 30 3.8
AY113649-1|AAM29654.1| 701|Drosophila melanogaster SD12335p pro... 29 6.6
AE014296-828|AAN11599.1| 1465|Drosophila melanogaster CG32251-PA... 29 6.6
X62629-1|CAA44496.1| 974|Drosophila melanogaster lodestar prote... 29 8.8
AY089617-1|AAL90355.1| 958|Drosophila melanogaster RE32881p pro... 29 8.8
AE014298-1748|AAF48140.5| 1040|Drosophila melanogaster CG32656-P... 29 8.8
AE014297-673|AAF54167.1| 1061|Drosophila melanogaster CG2684-PA ... 29 8.8
>AY075574-1|AAL68379.1| 980|Drosophila melanogaster SD04405p protein.
Length = 980
Score = 44.4 bits (100), Expect = 2e-04
Identities = 26/108 (24%), Positives = 53/108 (49%)
Frame = -1
Query: 674 SINFHMXLFFMWITVTLVNVPALLTWARNFKYSMVLKPDTSYHTGLVMSVCSSCIWQING 495
+ +FH+ L M L+N P+ L W R+ ++ + L PD S + +V+ S + Q+
Sbjct: 863 NFSFHVTLLLMLFVQLLLNAPSSLAWLRSRRHGINL-PDPSLYPSIVVLASLSLLLQLRA 921
Query: 494 PRRNLKHYEAVSSLLFTMAIFILALGPLSLTIVNYGITFTFVVITLQQ 351
P++ + Y +S + +A +L ++ + Y I F +++ Q
Sbjct: 922 PQK-CQGYWMLSIAFYILAGVVLLYCQAAIYRLTYVIAGAFALLSAHQ 968
>AE014298-775|AAF46062.3| 980|Drosophila melanogaster CG3160-PA
protein.
Length = 980
Score = 44.4 bits (100), Expect = 2e-04
Identities = 26/108 (24%), Positives = 53/108 (49%)
Frame = -1
Query: 674 SINFHMXLFFMWITVTLVNVPALLTWARNFKYSMVLKPDTSYHTGLVMSVCSSCIWQING 495
+ +FH+ L M L+N P+ L W R+ ++ + L PD S + +V+ S + Q+
Sbjct: 863 NFSFHVTLLLMLFVQLLLNAPSSLAWLRSRRHGINL-PDPSLYPSIVVLASLSLLLQLRA 921
Query: 494 PRRNLKHYEAVSSLLFTMAIFILALGPLSLTIVNYGITFTFVVITLQQ 351
P++ + Y +S + +A +L ++ + Y I F +++ Q
Sbjct: 922 PQK-CQGYWMLSIAFYILAGVVLLYCQAAIYRLTYVIAGAFALLSAHQ 968
>AE014296-3156|AAF49157.1| 728|Drosophila melanogaster CG9472-PA
protein.
Length = 728
Score = 32.7 bits (71), Expect = 0.54
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 551 YHTGLVMSVCSSCIWQINGPRRNLKHYEAV-SSLLFTMAIFILALGPLSLTIVNYGITF 378
Y T +++++C +CIW +G R + + + L + IL P+ TI++ F
Sbjct: 11 YLTLIIIAICVACIWMFSGFRHEYGKFNMILVAFLAVTLLQILIFTPIKFTIMSLDAAF 69
>BT023782-1|AAZ41791.1| 779|Drosophila melanogaster LD11946p
protein.
Length = 779
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQKE--EADNIQTNDCDPCNENRIFDAFKNLQD 174
+++D ++ TNE+ ND D P E+++E + DN D D E+ D + +D
Sbjct: 345 NQDDGSNADSLETNEADNDEDPNPDESEEELGDGDNDPDGDGDLDGEDEDEDELEECED 403
>AE014298-1023|AAN09205.1| 965|Drosophila melanogaster CG9650-PC,
isoform C protein.
Length = 965
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQKE--EADNIQTNDCDPCNENRIFDAFKNLQD 174
+++D ++ TNE+ ND D P E+++E + DN D D E+ D + +D
Sbjct: 531 NQDDGSNADSLETNEADNDEDPNPDESEEELGDGDNDPDGDGDLDGEDEDEDELEECED 589
>AE014298-1022|AAN09204.1| 979|Drosophila melanogaster CG9650-PB,
isoform B protein.
Length = 979
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQKE--EADNIQTNDCDPCNENRIFDAFKNLQD 174
+++D ++ TNE+ ND D P E+++E + DN D D E+ D + +D
Sbjct: 545 NQDDGSNADSLETNEADNDEDPNPDESEEELGDGDNDPDGDGDLDGEDEDEDELEECED 603
>AE014298-1021|AAF46246.3| 807|Drosophila melanogaster CG9650-PA,
isoform A protein.
Length = 807
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQKE--EADNIQTNDCDPCNENRIFDAFKNLQD 174
+++D ++ TNE+ ND D P E+++E + DN D D E+ D + +D
Sbjct: 373 NQDDGSNADSLETNEADNDEDPNPDESEEELGDGDNDPDGDGDLDGEDEDEDELEECED 431
>U15220-1|AAA61796.1| 1051|Drosophila melanogaster gp150 protein
protein.
Length = 1051
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTNDCDPCNENRIFDAFKNLQDKFD 165
DKED S ++ +D D+ N + + + N + N+ FD F N + K
Sbjct: 859 DKEDDSSDYDSEEDDDDDDEDDDDDNNDDDRFEEAKKNAKAKADANKAFDTFVNKELKPV 918
Query: 164 LTT 156
L T
Sbjct: 919 LKT 921
>BT015195-1|AAT94424.1| 1076|Drosophila melanogaster RE72245p protein.
Length = 1076
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTNDCDPCNENRIFDAFKNLQDKFD 165
DKED S ++ +D D+ N + + + N + N+ FD F N + K
Sbjct: 884 DKEDDSSDYDSEEDDDDDDEDDDDDNNDDDRFEEAKKNAKAKADANKAFDTFVNKELKPV 943
Query: 164 LTT 156
L T
Sbjct: 944 LKT 946
>BT011025-1|AAR30185.1| 1051|Drosophila melanogaster RE46351p protein.
Length = 1051
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTNDCDPCNENRIFDAFKNLQDKFD 165
DKED S ++ +D D+ N + + + N + N+ FD F N + K
Sbjct: 859 DKEDDSSDYDSEEDDDDDDEDDDDDNNDDDRFEEAKKNAKAKADANKAFDTFVNKELKPV 918
Query: 164 LTT 156
L T
Sbjct: 919 LKT 921
>AY029705-1|AAK39644.1| 1051|Drosophila melanogaster leucine rich
repeat protein GP150 protein.
Length = 1051
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTNDCDPCNENRIFDAFKNLQDKFD 165
DKED S ++ +D D+ N + + + N + N+ FD F N + K
Sbjct: 859 DKEDDSSDYDSEEDDDDDDEDDDDDNNDDDRFEEAKKNAKAKADANKAFDTFVNKELKPV 918
Query: 164 LTT 156
L T
Sbjct: 919 LKT 921
>AE013599-3379|AAG22195.1| 1051|Drosophila melanogaster CG5820-PC,
isoform C protein.
Length = 1051
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTNDCDPCNENRIFDAFKNLQDKFD 165
DKED S ++ +D D+ N + + + N + N+ FD F N + K
Sbjct: 859 DKEDDSSDYDSEEDDDDDDEDDDDDNNDDDRFEEAKKNAKAKADANKAFDTFVNKELKPV 918
Query: 164 LTT 156
L T
Sbjct: 919 LKT 921
>AE013599-3378|AAM68222.1| 1051|Drosophila melanogaster CG5820-PB,
isoform B protein.
Length = 1051
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTNDCDPCNENRIFDAFKNLQDKFD 165
DKED S ++ +D D+ N + + + N + N+ FD F N + K
Sbjct: 859 DKEDDSSDYDSEEDDDDDDEDDDDDNNDDDRFEEAKKNAKAKADANKAFDTFVNKELKPV 918
Query: 164 LTT 156
L T
Sbjct: 919 LKT 921
>AE013599-3377|AAF46831.1| 1051|Drosophila melanogaster CG5820-PA,
isoform A protein.
Length = 1051
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTNDCDPCNENRIFDAFKNLQDKFD 165
DKED S ++ +D D+ N + + + N + N+ FD F N + K
Sbjct: 859 DKEDDSSDYDSEEDDDDDDEDDDDDNNDDDRFEEAKKNAKAKADANKAFDTFVNKELKPV 918
Query: 164 LTT 156
L T
Sbjct: 919 LKT 921
>AE013599-3376|AAM68221.1| 1076|Drosophila melanogaster CG5820-PD,
isoform D protein.
Length = 1076
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTNDCDPCNENRIFDAFKNLQDKFD 165
DKED S ++ +D D+ N + + + N + N+ FD F N + K
Sbjct: 884 DKEDDSSDYDSEEDDDDDDEDDDDDNNDDDRFEEAKKNAKAKADANKAFDTFVNKELKPV 943
Query: 164 LTT 156
L T
Sbjct: 944 LKT 946
>AY113649-1|AAM29654.1| 701|Drosophila melanogaster SD12335p
protein.
Length = 701
Score = 29.1 bits (62), Expect = 6.6
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 13/84 (15%)
Frame = -1
Query: 356 QQVCDKEDVQSSTIEGTNESKNDNDEKPKENQKEEA-----DNIQTNDCDPCNE------ 210
+++ DK D + E+KND DE P++N E++ D+ +C+ E
Sbjct: 126 EEIIDKVDSTAEDDGDAEENKNDADEDPEDNPVEDSEDEKNDSESEQECEANPEPETQTR 185
Query: 209 --NRIFDAFKNLQDKFDLTTMDNL 144
NRI AF++ D D +D L
Sbjct: 186 KKNRIIKAFED--DNSDEDDLDLL 207
>AE014296-828|AAN11599.1| 1465|Drosophila melanogaster CG32251-PA
protein.
Length = 1465
Score = 29.1 bits (62), Expect = 6.6
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 13/84 (15%)
Frame = -1
Query: 356 QQVCDKEDVQSSTIEGTNESKNDNDEKPKENQKEEA-----DNIQTNDCDPCNE------ 210
+++ DK D + E+KND DE P++N E++ D+ +C+ E
Sbjct: 890 EEIIDKVDSTAEDDGDAEENKNDADEDPEDNPVEDSEDEKNDSESEQECEANPEPETQTR 949
Query: 209 --NRIFDAFKNLQDKFDLTTMDNL 144
NRI AF++ D D +D L
Sbjct: 950 KKNRIIKAFED--DNSDEDDLDLL 971
>X62629-1|CAA44496.1| 974|Drosophila melanogaster lodestar protein
protein.
Length = 974
Score = 28.7 bits (61), Expect = 8.8
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -1
Query: 371 VVITLQQVCDKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQ 237
VVI Q ++E S T E ++DN + +E++ E D+++
Sbjct: 49 VVIDETQSEEEESQSSETAESEKSDESDNSQNSQESEDSEDDSVR 93
>AY089617-1|AAL90355.1| 958|Drosophila melanogaster RE32881p
protein.
Length = 958
Score = 28.7 bits (61), Expect = 8.8
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQ-KEEADNIQTNDCDPCNE 210
+KE + ++ K DND K K+++ KEE DN D D +E
Sbjct: 833 EKEKDSKEKNDKDSKEKKDNDSKDKKDKSKEEKDNESQKDNDGDDE 878
>AE014298-1748|AAF48140.5| 1040|Drosophila melanogaster CG32656-PA
protein.
Length = 1040
Score = 28.7 bits (61), Expect = 8.8
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQ-KEEADNIQTNDCDPCNE 210
+KE + ++ K DND K K+++ KEE DN D D +E
Sbjct: 915 EKEKDSKEKNDKDSKEKKDNDSKDKKDKSKEEKDNESQKDNDGDDE 960
>AE014297-673|AAF54167.1| 1061|Drosophila melanogaster CG2684-PA
protein.
Length = 1061
Score = 28.7 bits (61), Expect = 8.8
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -1
Query: 371 VVITLQQVCDKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQ 237
VVI Q ++E S T E ++DN + +E++ E D+++
Sbjct: 49 VVIDETQSEEEESQSSETAESEKSDESDNSQNSQESEDSEDDSVR 93
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,705,410
Number of Sequences: 53049
Number of extensions: 498104
Number of successful extensions: 1907
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1901
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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