Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12b22
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 33 0.16
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 32 0.37
AC006693-3|AAF60377.1| 455|Caenorhabditis elegans Skn related p... 32 0.49
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z66524-3|CAB54303.1| 475|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z69718-2|CAA93536.1| 139|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF067607-1|AAY86220.1| 342|Caenorhabditis elegans Hypothetical ... 30 2.0
Z68300-1|CAA92617.1| 185|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z78415-11|CAL36495.1| 435|Caenorhabditis elegans Hypothetical p... 29 3.5
Z78415-3|CAB01674.1| 530|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68114-10|CAA92157.2| 322|Caenorhabditis elegans Hypothetical p... 29 3.5
Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical p... 29 4.6
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z82282-3|CAB05275.1| 638|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z68751-9|CAA92979.2| 238|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z68337-11|CAA92754.2| 238|Caenorhabditis elegans Hypothetical p... 29 4.6
Z11126-3|CAA77474.2| 487|Caenorhabditis elegans Hypothetical pr... 29 4.6
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 29 4.6
AC006808-4|AAF60815.3| 397|Caenorhabditis elegans Hypothetical ... 29 4.6
AC006808-3|AAT68889.1| 433|Caenorhabditis elegans Hypothetical ... 29 4.6
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z49908-4|CAA90095.1| 535|Caenorhabditis elegans Hypothetical pr... 28 6.0
U20864-11|AAV58867.1| 583|Caenorhabditis elegans C. elegans ADA... 28 6.0
U20864-10|AAK68355.1| 596|Caenorhabditis elegans C. elegans ADA... 28 6.0
AF045639-5|AAC02569.2| 937|Caenorhabditis elegans Osmotic avoid... 28 6.0
AF031408-1|AAB87064.1| 937|Caenorhabditis elegans olfactory cha... 28 6.0
Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p... 28 8.0
AL110487-6|CAB54433.2| 472|Caenorhabditis elegans Hypothetical ... 28 8.0
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -1
Query: 338 EDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTNDCDPCNENRIFDAFKNLQDKFD 165
+D + + + K+DNDE+ KE K++ D + +D D ++ D K DK D
Sbjct: 173 DDDEEDKKKDKKKKKDDNDEEEKEKDKKKKDKKKDDDDDEDENDKKKDKKKKKDDKDD 230
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTNDCDPCNENRIFDAFKNLQDKFD 165
D +D + + ++ KND+DE+ K+ K++ + +D D +N+ D K DK D
Sbjct: 251 DDDDEEEKDKKKKDKKKNDDDEEDKKKDKKKK---KDDDDDEDEDNKKKDKKKKKDDKDD 307
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = -1
Query: 302 ESKNDNDEKPKENQKEEADNIQTNDCDPCNENRIFDAFKNLQD 174
E + +N++ KEN++ E DN Q P N+ +F +K + D
Sbjct: 38 EKEKENEKIEKENKERERDNFQLRKLFP-NDKTVFSEYKEVGD 79
>AC006693-3|AAF60377.1| 455|Caenorhabditis elegans Skn related
protein 1 protein.
Length = 455
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 380 FTFVVITLQQVCDKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQT 234
FT +T+Q+ ED+ +G ES N+N K K Q++E T
Sbjct: 60 FTVAPLTVQEKSLLEDLTKGVYDGFFESLNENQYKQKHQQQQEQTKAPT 108
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 31.5 bits (68), Expect = 0.65
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 305 NESKNDNDEKPKENQKEEADNIQTNDCDPCNEN 207
N + DNDEK K E+ + Q++D D +EN
Sbjct: 32 NSTSEDNDEKEKAADSPESSSDQSDDSDDASEN 64
>Z66524-3|CAB54303.1| 475|Caenorhabditis elegans Hypothetical
protein T13H5.6 protein.
Length = 475
Score = 31.1 bits (67), Expect = 0.86
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -1
Query: 302 ESKNDNDEKPKENQKEEADNIQTNDCDPCNENRIFDAFKNLQDKF 168
E K + K+ +K + DC PC+ NR + NL+D +
Sbjct: 218 EVKGQFERNSKKKKKNPRPEMPAPDCAPCSSNRSSEEESNLEDVY 262
>Z69718-2|CAA93536.1| 139|Caenorhabditis elegans Hypothetical
protein W06D11.3 protein.
Length = 139
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 335 DVQSSTIEGTNESKNDNDEKPKENQKEE 252
D SS I GT +S N+ND+K +E +E+
Sbjct: 111 DTSSSDIAGTTDSNNNNDKKTEELPEEK 138
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical
protein F47A4.2 protein.
Length = 3498
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTNDCD-PCNENRIFDAFKNLQDKF 168
DKE+ + E +++K N +K K+ +KE++ + TND D P N + A N DK
Sbjct: 541 DKEN-ECEKKEDESKTKEKNKDKEKDKEKEKSVDEHTNDLDVPINPDDAEMADAN--DKT 597
Query: 167 DLTTMDNL 144
D + L
Sbjct: 598 DASEKQKL 605
>AF067607-1|AAY86220.1| 342|Caenorhabditis elegans Hypothetical
protein C18H7.10 protein.
Length = 342
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -1
Query: 356 QQVCDKEDVQSSTIEGTNES--KNDNDEKPKENQKEEADNIQTNDCDPCNENRIFDAFK 186
++ ++EDV++ N+ KN+ D K K+N +++AD + ++ D +E DA K
Sbjct: 210 EEEVEEEDVEAKGDNDKNDKNKKNNEDAKKKDNTQKDADEEEEDNSD--DEPETLDANK 266
>Z68300-1|CAA92617.1| 185|Caenorhabditis elegans Hypothetical
protein T22B3.3 protein.
Length = 185
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTND 228
DKE + E E KN+ E+ KE++KEE + D
Sbjct: 143 DKEKKEEEKEEKKEEKKNEEKEEKKEDKKEEKKEEKEED 181
>Z78415-11|CAL36495.1| 435|Caenorhabditis elegans Hypothetical
protein C17G1.3b protein.
Length = 435
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 475 CFKFL-LGPLICQIQLEQTDMTRPV*YDVSGFSTMEYLKFRAHVN 606
C K + L L+ Q++ E+ D+ +D G+ EYL+ AHV+
Sbjct: 27 CTKVMKLSELLDQLKSEKFDLAITEAFDSCGYGIFEYLQIPAHVS 71
>Z78415-3|CAB01674.1| 530|Caenorhabditis elegans Hypothetical
protein C17G1.3a protein.
Length = 530
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 475 CFKFL-LGPLICQIQLEQTDMTRPV*YDVSGFSTMEYLKFRAHVN 606
C K + L L+ Q++ E+ D+ +D G+ EYL+ AHV+
Sbjct: 122 CTKVMKLSELLDQLKSEKFDLAITEAFDSCGYGIFEYLQIPAHVS 166
>Z68114-10|CAA92157.2| 322|Caenorhabditis elegans Hypothetical
protein F17A2.13 protein.
Length = 322
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQT 234
+K DVQ + E N +KN+NDE EN+ E + ++T
Sbjct: 97 EKADVQENFDEQEN-AKNENDEVFYENENEAKELVET 132
>Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical
protein R11A5.1b protein.
Length = 896
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTND 228
D+ED + E E ++D DE+ +E EE + + D
Sbjct: 595 DEEDEEEEENESEEEEEDDEDEESEEESDEEDEEEEEED 633
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTND 228
D+ED + E E ++D DE+ +E EE + + D
Sbjct: 605 DEEDEEEEENESEEEEEDDEDEESEEESDEEDEEEEEED 643
>Z82282-3|CAB05275.1| 638|Caenorhabditis elegans Hypothetical
protein T07G12.3 protein.
Length = 638
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 15 NFTWFPICDKLWHSLLLNVYHYYNPTNTIYIN-ISKTKQVHKLLQII 152
N PI D W + + NV H YNP Y N + T+ V+ +I+
Sbjct: 62 NICALPIYD-YWDTSIKNVMHEYNPARNCYKNYVQWTELVNSTWRIV 107
>Z68751-9|CAA92979.2| 238|Caenorhabditis elegans Hypothetical
protein T05E11.7 protein.
Length = 238
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = -1
Query: 353 QVCDKEDVQSSTIEGTNESKNDNDEKPKENQKEEADN 243
Q D +D Q T+ ++ +N+EKP +N+ + +N
Sbjct: 200 QKADAKDPQYETLNEVDKGIFNNEEKPSKNENKNVEN 236
>Z68337-11|CAA92754.2| 238|Caenorhabditis elegans Hypothetical
protein T05E11.7 protein.
Length = 238
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = -1
Query: 353 QVCDKEDVQSSTIEGTNESKNDNDEKPKENQKEEADN 243
Q D +D Q T+ ++ +N+EKP +N+ + +N
Sbjct: 200 QKADAKDPQYETLNEVDKGIFNNEEKPSKNENKNVEN 236
>Z11126-3|CAA77474.2| 487|Caenorhabditis elegans Hypothetical
protein ZK643.5 protein.
Length = 487
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTND 228
D+ED+ + E T+E++++ + E++KEE D + D
Sbjct: 55 DQEDILDTVPEQTDENEDEAGDDELESEKEELDYDEEED 93
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = -1
Query: 344 DKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTNDCDPCNENRIFDAFKNLQDKFD 165
+K++ + E E K +DEK K +K++ + +T + D + + + +DK D
Sbjct: 68 EKKEEEKKEEEKKEEEKKADDEKKKTEEKDDKKSKKTEEKDKLSVKKTQETKSERKDKKD 127
>AC006808-4|AAF60815.3| 397|Caenorhabditis elegans Hypothetical
protein Y58G8A.4a protein.
Length = 397
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -1
Query: 650 FFMWITVTLVNVPALLTWARNFKYSMVLKPDTSYHTGLVMSVCSSCIWQINGPRR 486
F +WI TL+N+P L+++ + S ++P + + G C WQ R+
Sbjct: 175 FLIWIVSTLINLPYLMSF-EHVDGSFYVQPGETPYCG---HFCDEANWQSENSRK 225
>AC006808-3|AAT68889.1| 433|Caenorhabditis elegans Hypothetical
protein Y58G8A.4b protein.
Length = 433
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -1
Query: 650 FFMWITVTLVNVPALLTWARNFKYSMVLKPDTSYHTGLVMSVCSSCIWQINGPRR 486
F +WI TL+N+P L+++ + S ++P + + G C WQ R+
Sbjct: 175 FLIWIVSTLINLPYLMSF-EHVDGSFYVQPGETPYCG---HFCDEANWQSENSRK 225
>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical protein
C01B9.1b protein.
Length = 1671
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/84 (28%), Positives = 38/84 (45%)
Frame = -1
Query: 341 KEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTNDCDPCNENRIFDAFKNLQDKFDL 162
KE+ TIE ++ D+ N +E A + DP N N++F FK L
Sbjct: 1518 KEEETGGTIEINRIAEMDH----WRNLEEFAVVDYVINADPLNFNQLFGHFKTLNVCLQN 1573
Query: 161 TTMDNL*QLVYLFCF*NIYINSIC 90
T+DNL + ++Y++ IC
Sbjct: 1574 FTVDNLLFMKQKSLASSLYLHFIC 1597
>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical protein
C01B9.1a protein.
Length = 1601
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/84 (28%), Positives = 38/84 (45%)
Frame = -1
Query: 341 KEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTNDCDPCNENRIFDAFKNLQDKFDL 162
KE+ TIE ++ D+ N +E A + DP N N++F FK L
Sbjct: 1448 KEEETGGTIEINRIAEMDH----WRNLEEFAVVDYVINADPLNFNQLFGHFKTLNVCLQN 1503
Query: 161 TTMDNL*QLVYLFCF*NIYINSIC 90
T+DNL + ++Y++ IC
Sbjct: 1504 FTVDNLLFMKQKSLASSLYLHFIC 1527
>Z49908-4|CAA90095.1| 535|Caenorhabditis elegans Hypothetical
protein C07E3.4 protein.
Length = 535
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -1
Query: 359 LQQVCDKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTNDCDPCNENRIF 198
L++ +KE E + + D E+ KE++KEE ++ + C EN ++
Sbjct: 119 LKEKKEKEKTDEEKRERKEDKREDKKEEKKEDKKEEKKEVRKD----CRENSMY 168
>U20864-11|AAV58867.1| 583|Caenorhabditis elegans C. elegans ADA-2
protein, isoform b protein.
Length = 583
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = -1
Query: 371 VVITLQQVCDKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTNDCDPCNENRIFDA 192
+ I +QQV E I+G E+K E+PK + + +DCDP NE R +
Sbjct: 176 LAIKVQQVL--EQYVQKVIDGDIETKY---ERPKFLTNQYETELSPDDCDPDNE-RDMKS 229
Query: 191 FKNLQDKFDLTTMDN 147
++++ + + DN
Sbjct: 230 KRSVKQEINTDDSDN 244
>U20864-10|AAK68355.1| 596|Caenorhabditis elegans C. elegans ADA-2
protein, isoform a protein.
Length = 596
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = -1
Query: 371 VVITLQQVCDKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTNDCDPCNENRIFDA 192
+ I +QQV E I+G E+K E+PK + + +DCDP NE R +
Sbjct: 189 LAIKVQQVL--EQYVQKVIDGDIETKY---ERPKFLTNQYETELSPDDCDPDNE-RDMKS 242
Query: 191 FKNLQDKFDLTTMDN 147
++++ + + DN
Sbjct: 243 KRSVKQEINTDDSDN 257
>AF045639-5|AAC02569.2| 937|Caenorhabditis elegans Osmotic
avoidance abnormal protein9 protein.
Length = 937
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/50 (22%), Positives = 29/50 (58%)
Frame = -1
Query: 476 HYEAVSSLLFTMAIFILALGPLSLTIVNYGITFTFVVITLQQVCDKEDVQ 327
+Y+A++ LF + +F++ + +++ I G T+T V+ ++ ++ Q
Sbjct: 613 NYQALTKTLFVLYMFVMPIMMINILIAMMGNTYTTVIAQAEKAWRQQYAQ 662
>AF031408-1|AAB87064.1| 937|Caenorhabditis elegans olfactory
channel protein.
Length = 937
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/50 (22%), Positives = 29/50 (58%)
Frame = -1
Query: 476 HYEAVSSLLFTMAIFILALGPLSLTIVNYGITFTFVVITLQQVCDKEDVQ 327
+Y+A++ LF + +F++ + +++ I G T+T V+ ++ ++ Q
Sbjct: 613 NYQALTKTLFVLYMFVMPIMMINILIAMMGNTYTTVIAQAEKAWRQQYAQ 662
>Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
protein T05F1.6 protein.
Length = 1165
Score = 27.9 bits (59), Expect = 8.0
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = -1
Query: 389 GITFTFVVITLQQVCDKEDVQSSTIEGTNESKNDNDEKPKENQKEEADNIQTNDCDPCNE 210
G TF +I++ DK D+ S S +++ EKP+EN+++ + D D E
Sbjct: 121 GETFEKKIISMDTSDDKLDIAESI------SVSNDTEKPEENEEKVVGDEDEEDIDDVQE 174
Query: 209 NRIFDAFKNLQDKFDLTTMDN 147
+ +A K K T+ D+
Sbjct: 175 DDEDEAPKKKTKKAVSTSDDD 195
>AL110487-6|CAB54433.2| 472|Caenorhabditis elegans Hypothetical
protein Y39E4B.7 protein.
Length = 472
Score = 27.9 bits (59), Expect = 8.0
Identities = 24/97 (24%), Positives = 41/97 (42%)
Frame = -1
Query: 593 RNFKYSMVLKPDTSYHTGLVMSVCSSCIWQINGPRRNLKHYEAVSSLLFTMAIFILALGP 414
RN++Y S H V +C + +W +G N + + + S + AI +LAL
Sbjct: 143 RNYRYFFFFLCSLSIHMMYVFFLCFAYVW--SGSDTNARDH--ILSPPYLCAIVLLALCA 198
Query: 413 LSLTIVNYGITFTFVVITLQQVCDKEDVQSSTIEGTN 303
+ L + G+T +V+ + E V G N
Sbjct: 199 V-LCVPVIGLTVFHLVLVARGRTTNEQVTGKFTSGYN 234
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,725,327
Number of Sequences: 27780
Number of extensions: 273980
Number of successful extensions: 1156
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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