Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12b05
(786 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024985-1|ABE01215.1| 479|Drosophila melanogaster IP12064p pro... 33 0.33
AE013599-2705|AAM68459.1| 497|Drosophila melanogaster CG30120-P... 33 0.33
AY060828-1|AAL28376.1| 337|Drosophila melanogaster GM01318p pro... 29 7.2
AE014296-2207|AAF49872.2| 427|Drosophila melanogaster CG11009-P... 29 7.2
BT015311-1|AAT94539.1| 1320|Drosophila melanogaster AT04056p pro... 29 9.5
BT001901-1|AAN71690.1| 1252|Drosophila melanogaster SD21833p pro... 29 9.5
AY051839-1|AAK93263.1| 961|Drosophila melanogaster LD34385p pro... 29 9.5
AE014296-595|AAN11542.2| 1320|Drosophila melanogaster CG17569-PB... 29 9.5
AE014296-594|AAF47736.3| 1338|Drosophila melanogaster CG17569-PA... 29 9.5
>BT024985-1|ABE01215.1| 479|Drosophila melanogaster IP12064p
protein.
Length = 479
Score = 33.5 bits (73), Expect = 0.33
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Frame = -2
Query: 404 FMYI--QRVFQFGRSRERQAELVNTNVYESTENFHFNGDEPTEKV-SNKTNKNITQHESV 234
FMY Q +F R RE++ + NVYE E FH +E +K+ + + K + E +
Sbjct: 89 FMYYATQELF-LDRKREKEYQ---DNVYEKAEEFHKFAEESLKKMEAEEFKKMLEAQEKL 144
Query: 233 SNANRRAIAEDESNVPFNDRDDINEPNIEFGKNEIIGSVINDNIPGFIEASAAKADEESN 54
++E+ + V + + E +G+ + + +I+ +E + D+ SN
Sbjct: 145 KTLKESKLSEELNEVKLEHQRVLMEVQEVYGRFQYLLKLIS-YFDDTVEEEQTEGDDASN 203
>AE013599-2705|AAM68459.1| 497|Drosophila melanogaster CG30120-PA
protein.
Length = 497
Score = 33.5 bits (73), Expect = 0.33
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Frame = -2
Query: 404 FMYI--QRVFQFGRSRERQAELVNTNVYESTENFHFNGDEPTEKV-SNKTNKNITQHESV 234
FMY Q +F R RE++ + NVYE E FH +E +K+ + + K + E +
Sbjct: 107 FMYYATQELF-LDRKREKEYQ---DNVYEKAEEFHKFAEESLKKMEAEEFKKMLEAQEKL 162
Query: 233 SNANRRAIAEDESNVPFNDRDDINEPNIEFGKNEIIGSVINDNIPGFIEASAAKADEESN 54
++E+ + V + + E +G+ + + +I+ +E + D+ SN
Sbjct: 163 KTLKESKLSEELNEVKLEHQRVLMEVQEVYGRFQYLLKLIS-YFDDTVEEEQTEGDDASN 221
>AY060828-1|AAL28376.1| 337|Drosophila melanogaster GM01318p
protein.
Length = 337
Score = 29.1 bits (62), Expect = 7.2
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = -2
Query: 332 VYESTENFHFNG-DEPTEKVSNKTNKNITQHESVSNANRRAIAEDESNVPFNDRDDINEP 156
++ + + F+G D P K S +T H + N+ + + + + PF D+
Sbjct: 22 LHSDSVSMEFSGQDNPIFKGSKGGRIYLTSHRMIFNSKKSSDSMQSFSAPFVALSDVEIE 81
Query: 155 NIEFGKNEIIGSV 117
FG N I G V
Sbjct: 82 QPVFGANYIKGKV 94
>AE014296-2207|AAF49872.2| 427|Drosophila melanogaster CG11009-PA
protein.
Length = 427
Score = 29.1 bits (62), Expect = 7.2
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = -2
Query: 332 VYESTENFHFNG-DEPTEKVSNKTNKNITQHESVSNANRRAIAEDESNVPFNDRDDINEP 156
++ + + F+G D P K S +T H + N+ + + + + PF D+
Sbjct: 22 LHSDSVSMEFSGQDNPIFKGSKGGRIYLTSHRMIFNSKKSSDSMQSFSAPFVALSDVEIE 81
Query: 155 NIEFGKNEIIGSV 117
FG N I G V
Sbjct: 82 QPVFGANYIKGKV 94
>BT015311-1|AAT94539.1| 1320|Drosophila melanogaster AT04056p protein.
Length = 1320
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +2
Query: 479 PLDGMFCIHW-LALCKDKGHRR---RGLDQSWTLLHVRC 583
P+ G+FCI W A CK++ + RGLD + L++ C
Sbjct: 1162 PIFGVFCIRWRRANCKEENESKFVIRGLDIAEPPLNIYC 1200
>BT001901-1|AAN71690.1| 1252|Drosophila melanogaster SD21833p protein.
Length = 1252
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +2
Query: 479 PLDGMFCIHW-LALCKDKGHRR---RGLDQSWTLLHVRC 583
P+ G+FCI W A CK++ + RGLD + L++ C
Sbjct: 1094 PIFGVFCIRWRRANCKEENESKFVIRGLDIAEPPLNIYC 1132
>AY051839-1|AAK93263.1| 961|Drosophila melanogaster LD34385p
protein.
Length = 961
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +2
Query: 479 PLDGMFCIHW-LALCKDKGHRR---RGLDQSWTLLHVRC 583
P+ G+FCI W A CK++ + RGLD + L++ C
Sbjct: 803 PIFGVFCIRWRRANCKEENESKFVIRGLDIAEPPLNIYC 841
>AE014296-595|AAN11542.2| 1320|Drosophila melanogaster CG17569-PB,
isoform B protein.
Length = 1320
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +2
Query: 479 PLDGMFCIHW-LALCKDKGHRR---RGLDQSWTLLHVRC 583
P+ G+FCI W A CK++ + RGLD + L++ C
Sbjct: 1162 PIFGVFCIRWRRANCKEENESKFVIRGLDIAEPPLNIYC 1200
>AE014296-594|AAF47736.3| 1338|Drosophila melanogaster CG17569-PA,
isoform A protein.
Length = 1338
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +2
Query: 479 PLDGMFCIHW-LALCKDKGHRR---RGLDQSWTLLHVRC 583
P+ G+FCI W A CK++ + RGLD + L++ C
Sbjct: 1180 PIFGVFCIRWRRANCKEENESKFVIRGLDIAEPPLNIYC 1218
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,588,593
Number of Sequences: 53049
Number of extensions: 757829
Number of successful extensions: 2615
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2615
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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