Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12b01
(869 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT015981-1|AAV36866.1| 426|Drosophila melanogaster RE64060p pro... 56 8e-08
AY069134-1|AAL39279.1| 351|Drosophila melanogaster GH14272p pro... 56 8e-08
AE014134-1310|AAF52537.1| 422|Drosophila melanogaster CG18585-P... 56 8e-08
AY071750-1|AAL49372.1| 422|Drosophila melanogaster RH58587p pro... 54 3e-07
AE013599-1585|AAF58456.1| 422|Drosophila melanogaster CG12374-P... 54 3e-07
BT001849-1|AAN71610.1| 428|Drosophila melanogaster RH57626p pro... 49 1e-05
AY118431-1|AAM48460.1| 424|Drosophila melanogaster RH39904p pro... 49 1e-05
AE014134-1691|AAF52809.1| 424|Drosophila melanogaster CG4017-PA... 49 1e-05
AY070608-1|AAL48079.1| 430|Drosophila melanogaster RE71127p pro... 48 2e-05
AE014134-1692|AAF52810.1| 430|Drosophila melanogaster CG17633-P... 48 2e-05
BT016051-1|AAV36936.1| 1132|Drosophila melanogaster LP17541p pro... 47 4e-05
AE014298-797|AAF46083.2| 1132|Drosophila melanogaster CG3108-PA ... 47 4e-05
AY113471-1|AAM29476.1| 445|Drosophila melanogaster RE43153p pro... 46 7e-05
AE014298-794|AAF46080.2| 445|Drosophila melanogaster CG3097-PA ... 46 7e-05
BT003291-1|AAO25051.1| 453|Drosophila melanogaster GM01959p pro... 45 2e-04
AY071562-1|AAL49184.1| 416|Drosophila melanogaster RE62864p pro... 44 4e-04
AE014296-1161|AAF50637.2| 416|Drosophila melanogaster CG14820-P... 44 4e-04
AE013599-551|AAG22303.1| 453|Drosophila melanogaster CG2915-PB,... 44 4e-04
AE013599-550|AAF59162.2| 453|Drosophila melanogaster CG2915-PA,... 44 4e-04
AY118570-1|AAM49939.1| 467|Drosophila melanogaster LD41739p pro... 41 0.003
AE014297-3320|AAF56130.2| 479|Drosophila melanogaster CG4408-PA... 41 0.003
BT024320-1|ABC86382.1| 394|Drosophila melanogaster IP11170p pro... 32 1.2
AE014298-2516|AAF48692.1| 1430|Drosophila melanogaster CG8945-PC... 31 2.1
BT003639-1|AAO39643.1| 916|Drosophila melanogaster AT16639p pro... 30 3.6
AE014298-1320|AAF46481.2| 916|Drosophila melanogaster CG32703-P... 30 3.6
BT022434-1|AAY54850.1| 107|Drosophila melanogaster IP05703p pro... 30 4.8
AE014297-2404|AAF55461.1| 121|Drosophila melanogaster CG14321-P... 30 4.8
>BT015981-1|AAV36866.1| 426|Drosophila melanogaster RE64060p
protein.
Length = 426
Score = 55.6 bits (128), Expect = 8e-08
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = -2
Query: 820 GVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIELRSK-KYRFKLPKDQIMETCKEI 644
G Y+ GST D+ Y A GTS DW + Y IE R K +Y F LP QI+ C+E+
Sbjct: 350 GTVYQYGSTADVLYVATGTSVDWVFNELGKKIGYTIEYRDKGRYGFILPPVQIIPNCEEL 409
Query: 643 LSAVKSLME 617
+ + +L+E
Sbjct: 410 MVGMLALIE 418
>AY069134-1|AAL39279.1| 351|Drosophila melanogaster GH14272p
protein.
Length = 351
Score = 55.6 bits (128), Expect = 8e-08
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = -2
Query: 820 GVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIELRSK-KYRFKLPKDQIMETCKEI 644
G Y+ GST D+ Y A GTS DW + Y IE R K +Y F LP QI+ C+E+
Sbjct: 275 GTVYQYGSTADVLYVATGTSVDWVFNELGKKIGYTIEYRDKGRYGFILPPVQIIPNCEEL 334
Query: 643 LSAVKSLME 617
+ + +L+E
Sbjct: 335 MVGMLALIE 343
>AE014134-1310|AAF52537.1| 422|Drosophila melanogaster CG18585-PA
protein.
Length = 422
Score = 55.6 bits (128), Expect = 8e-08
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = -2
Query: 820 GVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIELRSK-KYRFKLPKDQIMETCKEI 644
G Y+ GST D+ Y A GTS DW + Y IE R K +Y F LP QI+ C+E+
Sbjct: 346 GTVYQYGSTADVLYVATGTSVDWVFNELGKKIGYTIEYRDKGRYGFILPPVQIIPNCEEL 405
Query: 643 LSAVKSLME 617
+ + +L+E
Sbjct: 406 MVGMLALIE 414
>AY071750-1|AAL49372.1| 422|Drosophila melanogaster RH58587p
protein.
Length = 422
Score = 53.6 bits (123), Expect = 3e-07
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = -2
Query: 820 GVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIELRSK-KYRFKLPKDQIMETCKEI 644
G T+ G++ + Y G + DW+Y + KIP++ +ELR K + F LP +QI E E+
Sbjct: 345 GSTFTYGASGLLNYVVSGAAKDWAYGVKKIPFTCTVELRDKGTFGFFLPSNQITEVGLEV 404
Query: 643 LSAVKSLM 620
+ +K+L+
Sbjct: 405 TAGLKALV 412
>AE013599-1585|AAF58456.1| 422|Drosophila melanogaster CG12374-PA
protein.
Length = 422
Score = 53.6 bits (123), Expect = 3e-07
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = -2
Query: 820 GVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIELRSK-KYRFKLPKDQIMETCKEI 644
G T+ G++ + Y G + DW+Y + KIP++ +ELR K + F LP +QI E E+
Sbjct: 345 GSTFTYGASGLLNYVVSGAAKDWAYGVKKIPFTCTVELRDKGTFGFFLPSNQITEVGLEV 404
Query: 643 LSAVKSLM 620
+ +K+L+
Sbjct: 405 TAGLKALV 412
>BT001849-1|AAN71610.1| 428|Drosophila melanogaster RH57626p
protein.
Length = 428
Score = 48.8 bits (111), Expect = 1e-05
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = -2
Query: 820 GVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIELRSKKYR----FKLPKDQIMETC 653
G Y G+ D Y A G+S DW+Y + + YS+ ELR Y F+LP QI+ T
Sbjct: 346 GTRYTGGNVYDAIYPAAGSSMDWAYGVLNVKYSFTYELRPSGYSFWTGFRLPAAQIIPTG 405
Query: 652 KEILSAVKSLME 617
+E ++ +++
Sbjct: 406 QETTDSLVEMIK 417
>AY118431-1|AAM48460.1| 424|Drosophila melanogaster RH39904p
protein.
Length = 424
Score = 48.8 bits (111), Expect = 1e-05
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = -2
Query: 820 GVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIELRSKKYR----FKLPKDQIMETC 653
G Y G+ D Y A G+S DW+Y + + YS+ ELR Y F+LP QI+ T
Sbjct: 342 GTRYTGGNVYDAIYPAAGSSMDWAYGVLNVKYSFTYELRPSGYSFWTGFRLPAAQIIPTG 401
Query: 652 KEILSAVKSLME 617
+E ++ +++
Sbjct: 402 QETTDSLVEMIK 413
>AE014134-1691|AAF52809.1| 424|Drosophila melanogaster CG4017-PA
protein.
Length = 424
Score = 48.8 bits (111), Expect = 1e-05
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = -2
Query: 820 GVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIELRSKKYR----FKLPKDQIMETC 653
G Y G+ D Y A G+S DW+Y + + YS+ ELR Y F+LP QI+ T
Sbjct: 342 GTRYTGGNVYDAIYPAAGSSMDWAYGVLNVKYSFTYELRPSGYSFWTGFRLPAAQIIPTG 401
Query: 652 KEILSAVKSLME 617
+E ++ +++
Sbjct: 402 QETTDSLVEMIK 413
>AY070608-1|AAL48079.1| 430|Drosophila melanogaster RE71127p
protein.
Length = 430
Score = 47.6 bits (108), Expect = 2e-05
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Frame = -2
Query: 820 GVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIELR--SKKY--RFKLPKDQIMETC 653
G TY G+ D Y A G S DW+Y + ++ ELR S Y FKLP +QI+
Sbjct: 350 GTTYTGGNIYDAIYPAAGASVDWAYGTQDVRMAFCYELRPSSTSYLTGFKLPAEQIVPAS 409
Query: 652 KEILSAVKSL 623
+E+L ++ ++
Sbjct: 410 EELLDSIVAM 419
>AE014134-1692|AAF52810.1| 430|Drosophila melanogaster CG17633-PA
protein.
Length = 430
Score = 47.6 bits (108), Expect = 2e-05
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Frame = -2
Query: 820 GVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIELR--SKKY--RFKLPKDQIMETC 653
G TY G+ D Y A G S DW+Y + ++ ELR S Y FKLP +QI+
Sbjct: 350 GTTYTGGNIYDAIYPAAGASVDWAYGTQDVRMAFCYELRPSSTSYLTGFKLPAEQIVPAS 409
Query: 652 KEILSAVKSL 623
+E+L ++ ++
Sbjct: 410 EELLDSIVAM 419
>BT016051-1|AAV36936.1| 1132|Drosophila melanogaster LP17541p protein.
Length = 1132
Score = 46.8 bits (106), Expect = 4e-05
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = -2
Query: 829 ESSGVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIEL-RSKKYRFKLPKDQIMETC 653
+S+GV Y VGS+ Y A G S DW+ IA I Y+Y IE+ + +Y F LP I
Sbjct: 1039 KSTGVKYTVGSSATTLYPAAGGSDDWAKGIAGIKYAYTIEMGDTGRYGFVLPARFIQYNG 1098
Query: 652 KEILSAVKSLMEFIDRN*QSLVSYVSRSSR 563
K+ ++ ++ I + V+ S SR
Sbjct: 1099 KDGVTFADTVARAIAQGRGKSVARNSSGSR 1128
>AE014298-797|AAF46083.2| 1132|Drosophila melanogaster CG3108-PA
protein.
Length = 1132
Score = 46.8 bits (106), Expect = 4e-05
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = -2
Query: 829 ESSGVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIEL-RSKKYRFKLPKDQIMETC 653
+S+GV Y VGS+ Y A G S DW+ IA I Y+Y IE+ + +Y F LP I
Sbjct: 1039 KSTGVKYTVGSSATTLYPAAGGSDDWAKGIAGIKYAYTIEMGDTGRYGFVLPARFIQYNG 1098
Query: 652 KEILSAVKSLMEFIDRN*QSLVSYVSRSSR 563
K+ ++ ++ I + V+ S SR
Sbjct: 1099 KDGVTFADTVARAIAQGRGKSVARNSSGSR 1128
>AY113471-1|AAM29476.1| 445|Drosophila melanogaster RE43153p
protein.
Length = 445
Score = 46.0 bits (104), Expect = 7e-05
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = -2
Query: 844 SSRNIESSGVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIELRSK-KYRFKLPKDQ 668
+ R ++ +G +Y+ T ++ A G S DWS A + Y Y IELR + Y F LP
Sbjct: 361 AERILQKTGTSYRAAVTHEVLGIAGGGSDDWSRAALGVKYVYTIELRDRGAYGFVLPPRF 420
Query: 667 IMETCKEILSAVKSLMEFI 611
I +T E + V+++ + I
Sbjct: 421 IKDTALEGWTVVETVAQAI 439
>AE014298-794|AAF46080.2| 445|Drosophila melanogaster CG3097-PA
protein.
Length = 445
Score = 46.0 bits (104), Expect = 7e-05
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = -2
Query: 844 SSRNIESSGVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIELRSK-KYRFKLPKDQ 668
+ R ++ +G +Y+ T ++ A G S DWS A + Y Y IELR + Y F LP
Sbjct: 361 AERILQKTGTSYRAAVTHEVLGIAGGGSDDWSRAALGVKYVYTIELRDRGAYGFVLPPRF 420
Query: 667 IMETCKEILSAVKSLMEFI 611
I +T E + V+++ + I
Sbjct: 421 IKDTALEGWTVVETVAQAI 439
>BT003291-1|AAO25051.1| 453|Drosophila melanogaster GM01959p
protein.
Length = 453
Score = 44.8 bits (101), Expect = 2e-04
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = -2
Query: 823 SGVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIELR---SKKYRFKLPKDQIMETC 653
SG Y GS + Y + G S DW+++ A IP +Y ELR + F LP +I T
Sbjct: 373 SGRDYVSGSLFETIYPSSGGSMDWAHSEAGIPIAYTFELRGPPDSQDLFILPAVEIQPTA 432
Query: 652 KEILSAVKSLME 617
E +A+++++E
Sbjct: 433 SEAFTAIRAIVE 444
>AY071562-1|AAL49184.1| 416|Drosophila melanogaster RE62864p
protein.
Length = 416
Score = 43.6 bits (98), Expect = 4e-04
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -2
Query: 820 GVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIELRSK-KYRFKLPKDQIMETCKEI 644
G + GS+ Y G+ +W+YA+ I Y IELR K + F LP + I+ +E+
Sbjct: 340 GTVFTYGSSATTLYEVSGSGKEWAYAVKNIKIHYTIELRDKGELGFVLPPEDIIPVAREV 399
>AE014296-1161|AAF50637.2| 416|Drosophila melanogaster CG14820-PA
protein.
Length = 416
Score = 43.6 bits (98), Expect = 4e-04
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -2
Query: 820 GVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIELRSK-KYRFKLPKDQIMETCKEI 644
G + GS+ Y G+ +W+YA+ I Y IELR K + F LP + I+ +E+
Sbjct: 340 GTVFTYGSSATTLYEVSGSGKEWAYAVKNIKIHYTIELRDKGELGFVLPPEDIIPVAREV 399
>AE013599-551|AAG22303.1| 453|Drosophila melanogaster CG2915-PB,
isoform B protein.
Length = 453
Score = 43.6 bits (98), Expect = 4e-04
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = -2
Query: 823 SGVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIELR---SKKYRFKLPKDQIMETC 653
+G Y GS + Y + G S DW+++ A IP +Y ELR + F LP +I T
Sbjct: 373 NGRDYVSGSLFETIYPSSGGSMDWAHSEAGIPIAYTFELRGPPDSQDLFILPAVEIQPTA 432
Query: 652 KEILSAVKSLME 617
E +A+++++E
Sbjct: 433 SEAFTAIRAIVE 444
>AE013599-550|AAF59162.2| 453|Drosophila melanogaster CG2915-PA,
isoform A protein.
Length = 453
Score = 43.6 bits (98), Expect = 4e-04
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = -2
Query: 823 SGVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIELR---SKKYRFKLPKDQIMETC 653
+G Y GS + Y + G S DW+++ A IP +Y ELR + F LP +I T
Sbjct: 373 NGRDYVSGSLFETIYPSSGGSMDWAHSEAGIPIAYTFELRGPPDSQDLFILPAVEIQPTA 432
Query: 652 KEILSAVKSLME 617
E +A+++++E
Sbjct: 433 SEAFTAIRAIVE 444
>AY118570-1|AAM49939.1| 467|Drosophila melanogaster LD41739p
protein.
Length = 467
Score = 40.7 bits (91), Expect = 0.003
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Frame = -2
Query: 853 GYISSRNIES-SGVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIELR---SKKYRF 686
G +++ I+ SG YK GS + Y + G S DW++ KIP ++ ELR + F
Sbjct: 376 GKLAANKIKDVSGRIYKSGSIYETIYPSSGGSKDWAHGQLKIPITFSYELRGPADSEDLF 435
Query: 685 KLPKDQIMETCKEILSAVKSLME 617
L +I T E ++++++++
Sbjct: 436 ILSAKEIEPTAAEAFASIQTIVQ 458
>AE014297-3320|AAF56130.2| 479|Drosophila melanogaster CG4408-PA
protein.
Length = 479
Score = 40.7 bits (91), Expect = 0.003
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Frame = -2
Query: 853 GYISSRNIES-SGVTYKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIELR---SKKYRF 686
G +++ I+ SG YK GS + Y + G S DW++ KIP ++ ELR + F
Sbjct: 388 GKLAANKIKDVSGRIYKSGSIYETIYPSSGGSKDWAHGQLKIPITFSYELRGPADSEDLF 447
Query: 685 KLPKDQIMETCKEILSAVKSLME 617
L +I T E ++++++++
Sbjct: 448 ILSAKEIEPTAAEAFASIQTIVQ 470
>BT024320-1|ABC86382.1| 394|Drosophila melanogaster IP11170p
protein.
Length = 394
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 111 FLYRKKRMGRLVRWSLYCTCNSHSQKSGLTLIGMRKLNAWTQ 236
F Y ++ + + R + CTC+++ Q+ L LIG+ +NA Q
Sbjct: 342 FFYHQRHLNEMARSFIDCTCDNNGQRL-LNLIGLPSVNAILQ 382
>AE014298-2516|AAF48692.1| 1430|Drosophila melanogaster CG8945-PC
protein.
Length = 1430
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -2
Query: 811 YKVGSTKDMTYYACGTSTDWSYAIAKIPYSYMIELRSK-KYRFKLPKDQIMETCKEILSA 635
YKV ++ D+ G + ++ IP+SY ++L + + LP I T ++
Sbjct: 1363 YKVDASNDLIEQRSGCADAFAAYEIGIPFSYTLQLADNGVHGYLLPSSAIEPTARDAFEI 1422
Query: 634 VKSLMEFI 611
+ ++++I
Sbjct: 1423 ISGMLDYI 1430
>BT003639-1|AAO39643.1| 916|Drosophila melanogaster AT16639p
protein.
Length = 916
Score = 30.3 bits (65), Expect = 3.6
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 305 RPFDFRVAMNNMVF*LNFRYIFSVSHNLIRAGY*TRKIFTRIFLWLLVN 451
R D A NN+ F L F ++ S HN+I+ G + + R ++ L+N
Sbjct: 87 RLVDIFKASNNLDFYLVFEFMESDLHNVIKRGNVLKDVHKRFVMYQLIN 135
>AE014298-1320|AAF46481.2| 916|Drosophila melanogaster CG32703-PA
protein.
Length = 916
Score = 30.3 bits (65), Expect = 3.6
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 305 RPFDFRVAMNNMVF*LNFRYIFSVSHNLIRAGY*TRKIFTRIFLWLLVN 451
R D A NN+ F L F ++ S HN+I+ G + + R ++ L+N
Sbjct: 87 RLVDIFKASNNLDFYLVFEFMESDLHNVIKRGNVLKDVHKRFVMYQLIN 135
>BT022434-1|AAY54850.1| 107|Drosophila melanogaster IP05703p
protein.
Length = 107
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 108 KFLYRKKRMGRLVRWSLYCTCNSHSQKSGLTLIGMRKLNAWTQ 236
++ Y++ + L TC+ H+Q GL+ +G+ K+N Q
Sbjct: 46 EYAYKETSKNEITYHELEVTCDQHAQCIGLSPVGVAKINCIRQ 88
>AE014297-2404|AAF55461.1| 121|Drosophila melanogaster CG14321-PA
protein.
Length = 121
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 108 KFLYRKKRMGRLVRWSLYCTCNSHSQKSGLTLIGMRKLNAWTQ 236
++ Y++ + L TC+ H+Q GL+ +G+ K+N Q
Sbjct: 43 EYAYKETSKNEITYHELEVTCDQHAQCIGLSPVGVAKINCIRQ 85
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,148,369
Number of Sequences: 53049
Number of extensions: 721188
Number of successful extensions: 1979
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1977
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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