Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12a16
(778 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113311-1|AAM29316.1| 431|Drosophila melanogaster AT27586p pro... 198 9e-51
AF160903-1|AAD46843.2| 398|Drosophila melanogaster HL03874p pro... 197 1e-50
AE014296-354|AAF47566.1| 431|Drosophila melanogaster CG12018-PA... 197 1e-50
M14548-1|AAB59221.1| 613|Drosophila melanogaster segmentation p... 29 5.4
AY059447-1|AAL13353.1| 590|Drosophila melanogaster GH22686p pro... 29 5.4
AE014134-2152|AAF53160.1| 590|Drosophila melanogaster CG6716-PA... 29 5.4
AE014134-2151|AAN10801.1| 613|Drosophila melanogaster CG6716-PB... 29 5.4
BT016081-1|AAV36966.1| 921|Drosophila melanogaster LD46555p pro... 29 7.1
AY061308-1|AAL28856.1| 805|Drosophila melanogaster LD22423p pro... 29 7.1
AE014134-3003|AAF53728.1| 921|Drosophila melanogaster CG18398-P... 29 7.1
X15583-1|CAA33609.1| 302|Drosophila melanogaster protein ( Frui... 29 9.4
S47852-1|AAB23957.1| 302|Drosophila melanogaster protein phosph... 29 9.4
DQ398892-1|ABD61608.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 9.4
DQ398891-1|ABD61607.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 9.4
DQ398890-1|ABD61606.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 9.4
DQ398889-1|ABD61605.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 9.4
DQ398888-1|ABD61604.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 9.4
DQ398886-1|ABD61602.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 9.4
DQ398885-1|ABD61601.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 9.4
AY061063-1|AAL28611.1| 302|Drosophila melanogaster LD03380p pro... 29 9.4
AY050230-1|AAK84929.1| 865|Drosophila melanogaster SD01621p pro... 29 9.4
AE014297-4282|AAF56829.1| 700|Drosophila melanogaster CG14527-P... 29 9.4
AE014297-3226|AAF56056.1| 2249|Drosophila melanogaster CG4792-PA... 29 9.4
AE014297-1518|AAF54810.1| 302|Drosophila melanogaster CG5650-PA... 29 9.4
>AY113311-1|AAM29316.1| 431|Drosophila melanogaster AT27586p
protein.
Length = 431
Score = 198 bits (482), Expect = 9e-51
Identities = 96/247 (38%), Positives = 150/247 (60%), Gaps = 9/247 (3%)
Frame = -2
Query: 765 QXPLPVRNEDRYIVLMSGLNMASKSADQILSLHLFLEWMSGLAGTSYYQEEVSKIVRVII 586
Q PL R +VL SGL+ ++ + +L+LF W++G G + +E +VR+I+
Sbjct: 163 QKPLAPIKRSRLLVLASGLDQL-QAHKFVEALNLFQYWLAGSLGNN---KEAGSMVRLIV 218
Query: 585 AGGVFANHSDESV---------LNESDVISSAELVDSLAAAISGVAPLDIMPGCKDPNDV 433
AG + V N +D + + +D A+ + P+DIMPG DP +
Sbjct: 219 AGNSVRASAMAHVPTLQVARTQANANDTVQAVSQLDQWFASWARSLPVDIMPGPYDPANF 278
Query: 432 MLPQKPFHYCLFPKATEYKSFRRVSNPYECEIGGLLCLGTSGEPVKDIMRYSNLDNSQEV 253
MLPQ+PFH C+FP+A + +F+ V+NPY C + L +GTSG+ V D++R ++LD++ E
Sbjct: 279 MLPQQPFHKCMFPQAAQLATFQAVTNPYSCRLDEALVVGTSGQNVSDLLRSTSLDSALEA 338
Query: 252 LKKTLEWRHLAPTCPDTVPCTPSVDTDPFIIYNCPAIYFSGNADEFGTTLYEGEEGQRIR 73
L+ TL W H+APT PDT+ C P +D+DPFI+ CP +Y++GN + F T L+EG +G+R R
Sbjct: 339 LRCTLTWGHVAPTAPDTLACYPYIDSDPFILRECPHVYYAGNCESFATELHEGSDGKRTR 398
Query: 72 IVSIPDF 52
+V +P F
Sbjct: 399 LVCVPSF 405
>AF160903-1|AAD46843.2| 398|Drosophila melanogaster HL03874p
protein.
Length = 398
Score = 197 bits (481), Expect = 1e-50
Identities = 96/247 (38%), Positives = 150/247 (60%), Gaps = 9/247 (3%)
Frame = -2
Query: 765 QXPLPVRNEDRYIVLMSGLNMASKSADQILSLHLFLEWMSGLAGTSYYQEEVSKIVRVII 586
Q PL R +VL SGL+ ++ + +L+LF W++G G + +E +VR+I+
Sbjct: 130 QKPLAPIKRSRLLVLASGLDQL-QAHKFVEALNLFQYWLAGSLGNN---KEAGSMVRLIV 185
Query: 585 AGGVFANHSDESV---------LNESDVISSAELVDSLAAAISGVAPLDIMPGCKDPNDV 433
AG + V N +D + + +D A+ + P+DIMPG DP +
Sbjct: 186 AGNSVRASAMAHVPTLQVARTQANANDTVQAVSQLDQWFASWARSLPVDIMPGPYDPANF 245
Query: 432 MLPQKPFHYCLFPKATEYKSFRRVSNPYECEIGGLLCLGTSGEPVKDIMRYSNLDNSQEV 253
MLPQ+PFH C+FP+A + +F+ V+NPY C + L +GTSG+ V D++R ++LD++ E
Sbjct: 246 MLPQQPFHKCMFPQAAQLATFQAVTNPYSCRLDEALVVGTSGQNVSDLLRSTSLDSALEA 305
Query: 252 LKKTLEWRHLAPTCPDTVPCTPSVDTDPFIIYNCPAIYFSGNADEFGTTLYEGEEGQRIR 73
L+ TL W H+APT PDT+ C P +++DPFI+ CP +Y++GN + F T L+EG EG+R R
Sbjct: 306 LRCTLTWGHVAPTAPDTLACYPYIESDPFILRECPHVYYAGNCESFATELHEGSEGKRTR 365
Query: 72 IVSIPDF 52
+V +P F
Sbjct: 366 LVCVPSF 372
>AE014296-354|AAF47566.1| 431|Drosophila melanogaster CG12018-PA
protein.
Length = 431
Score = 197 bits (481), Expect = 1e-50
Identities = 96/247 (38%), Positives = 150/247 (60%), Gaps = 9/247 (3%)
Frame = -2
Query: 765 QXPLPVRNEDRYIVLMSGLNMASKSADQILSLHLFLEWMSGLAGTSYYQEEVSKIVRVII 586
Q PL R +VL SGL+ ++ + +L+LF W++G G + +E +VR+I+
Sbjct: 163 QKPLAPIKRSRLLVLASGLDQL-QAHKFVEALNLFQYWLAGSLGNN---KEAGSMVRLIV 218
Query: 585 AGGVFANHSDESV---------LNESDVISSAELVDSLAAAISGVAPLDIMPGCKDPNDV 433
AG + V N +D + + +D A+ + P+DIMPG DP +
Sbjct: 219 AGNSVRASAMAHVPTLQVARTQANANDTVQAVSQLDQWFASWARSLPVDIMPGPYDPANF 278
Query: 432 MLPQKPFHYCLFPKATEYKSFRRVSNPYECEIGGLLCLGTSGEPVKDIMRYSNLDNSQEV 253
MLPQ+PFH C+FP+A + +F+ V+NPY C + L +GTSG+ V D++R ++LD++ E
Sbjct: 279 MLPQQPFHKCMFPQAAQLATFQAVTNPYSCRLDEALVVGTSGQNVSDLLRSTSLDSALEA 338
Query: 252 LKKTLEWRHLAPTCPDTVPCTPSVDTDPFIIYNCPAIYFSGNADEFGTTLYEGEEGQRIR 73
L+ TL W H+APT PDT+ C P +++DPFI+ CP +Y++GN + F T L+EG EG+R R
Sbjct: 339 LRCTLTWGHVAPTAPDTLACYPYIESDPFILRECPHVYYAGNCESFATELHEGSEGKRTR 398
Query: 72 IVSIPDF 52
+V +P F
Sbjct: 399 LVCVPSF 405
>M14548-1|AAB59221.1| 613|Drosophila melanogaster segmentation
protein protein.
Length = 613
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -2
Query: 528 ISSAELVDSLAAAISGVAPLDIMPGCKDPNDVMLPQKPFH 409
++++ + S+ +++ +APL +MPG DP V Q F+
Sbjct: 290 VAASSSLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFY 329
>AY059447-1|AAL13353.1| 590|Drosophila melanogaster GH22686p
protein.
Length = 590
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -2
Query: 528 ISSAELVDSLAAAISGVAPLDIMPGCKDPNDVMLPQKPFH 409
++++ + S+ +++ +APL +MPG DP V Q F+
Sbjct: 267 VAASSSLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFY 306
>AE014134-2152|AAF53160.1| 590|Drosophila melanogaster CG6716-PA,
isoform A protein.
Length = 590
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -2
Query: 528 ISSAELVDSLAAAISGVAPLDIMPGCKDPNDVMLPQKPFH 409
++++ + S+ +++ +APL +MPG DP V Q F+
Sbjct: 267 VAASSSLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFY 306
>AE014134-2151|AAN10801.1| 613|Drosophila melanogaster CG6716-PB,
isoform B protein.
Length = 613
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = -2
Query: 528 ISSAELVDSLAAAISGVAPLDIMPGCKDPNDVMLPQKPFH 409
++++ + S+ +++ +APL +MPG DP V Q F+
Sbjct: 290 VAASSSLPSVVSSVPSMAPLAMMPGSLDPATVYQQQYDFY 329
>BT016081-1|AAV36966.1| 921|Drosophila melanogaster LD46555p
protein.
Length = 921
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 297 KDIMRYSNLDNSQEVLKKTLEWRHLAPTCPDTVPCTPSVDTDPFI 163
+DI+ L + QE+ + L W+HL C TV C PS P++
Sbjct: 341 EDIINGLILMDHQELCNRILLWQHL--FCSSTVACLPSNLLVPYL 383
>AY061308-1|AAL28856.1| 805|Drosophila melanogaster LD22423p
protein.
Length = 805
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 297 KDIMRYSNLDNSQEVLKKTLEWRHLAPTCPDTVPCTPSVDTDPFI 163
+DI+ L + QE+ + L W+HL C TV C PS P++
Sbjct: 251 EDIINGLILMDHQELCNRILLWQHL--FCSSTVACLPSNLLVPYL 293
>AE014134-3003|AAF53728.1| 921|Drosophila melanogaster CG18398-PA
protein.
Length = 921
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 297 KDIMRYSNLDNSQEVLKKTLEWRHLAPTCPDTVPCTPSVDTDPFI 163
+DI+ L + QE+ + L W+HL C TV C PS P++
Sbjct: 341 EDIINGLILMDHQELCNRILLWQHL--FCSSTVACLPSNLLVPYL 383
>X15583-1|CAA33609.1| 302|Drosophila melanogaster protein (
Fruitfly mRNA for proteinphosphatase 1 alpha. ).
Length = 302
Score = 28.7 bits (61), Expect = 9.4
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -2
Query: 411 HYCLFPKATEYKSFRRVSNPYECEIGGLLCLGTSGEPVKDIMRYSNLD 268
H L P T + RR+ P + GLLC +P KD M + D
Sbjct: 171 HGGLSPDLTSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGWGEND 218
>S47852-1|AAB23957.1| 302|Drosophila melanogaster protein
phosphatase 1 catalyticsubunit 87B protein.
Length = 302
Score = 28.7 bits (61), Expect = 9.4
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -2
Query: 411 HYCLFPKATEYKSFRRVSNPYECEIGGLLCLGTSGEPVKDIMRYSNLD 268
H L P T + RR+ P + GLLC +P KD M + D
Sbjct: 171 HGGLSPDLTSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGWGEND 218
>DQ398892-1|ABD61608.1| 2043|Drosophila melanogaster Dicer-1 protein.
Length = 2043
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -2
Query: 633 TSYYQEEVSKIVRVIIAGGVFANHSDESVLNESDVISSAELVDSLAAAISGVAP 472
T Y+E ++K+ I +GG+ H + VL SD + S+ + + P
Sbjct: 1507 TIRYEESIAKLKTEIESGGMLVPHDQQLVLKRSDAAEAQVAKVSMMKLLKQLLP 1560
>DQ398891-1|ABD61607.1| 2043|Drosophila melanogaster Dicer-1 protein.
Length = 2043
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -2
Query: 633 TSYYQEEVSKIVRVIIAGGVFANHSDESVLNESDVISSAELVDSLAAAISGVAP 472
T Y+E ++K+ I +GG+ H + VL SD + S+ + + P
Sbjct: 1507 TIRYEESIAKLKTEIESGGMLVPHDQQLVLKRSDAAEAQVAKVSMMELLKQLLP 1560
>DQ398890-1|ABD61606.1| 2043|Drosophila melanogaster Dicer-1 protein.
Length = 2043
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -2
Query: 633 TSYYQEEVSKIVRVIIAGGVFANHSDESVLNESDVISSAELVDSLAAAISGVAP 472
T Y+E ++K+ I +GG+ H + VL SD + S+ + + P
Sbjct: 1507 TIRYEESIAKLKTEIESGGMLVPHDQQLVLKRSDAAEAQVAKVSMMELLKQLLP 1560
>DQ398889-1|ABD61605.1| 2043|Drosophila melanogaster Dicer-1 protein.
Length = 2043
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -2
Query: 633 TSYYQEEVSKIVRVIIAGGVFANHSDESVLNESDVISSAELVDSLAAAISGVAP 472
T Y+E ++K+ I +GG+ H + VL SD + S+ + + P
Sbjct: 1507 TIRYEESIAKLKTEIESGGMLVPHDQQLVLKRSDAAEAQVAKVSMMELLKQLLP 1560
>DQ398888-1|ABD61604.1| 2043|Drosophila melanogaster Dicer-1 protein.
Length = 2043
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -2
Query: 633 TSYYQEEVSKIVRVIIAGGVFANHSDESVLNESDVISSAELVDSLAAAISGVAP 472
T Y+E ++K+ I +GG+ H + VL SD + S+ + + P
Sbjct: 1507 TIRYEESIAKLKTEIESGGMLVPHDQQLVLKRSDAAEAQVAKVSMMELLKQLLP 1560
>DQ398886-1|ABD61602.1| 2043|Drosophila melanogaster Dicer-1 protein.
Length = 2043
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -2
Query: 633 TSYYQEEVSKIVRVIIAGGVFANHSDESVLNESDVISSAELVDSLAAAISGVAP 472
T Y+E ++K+ I +GG+ H + VL SD + S+ + + P
Sbjct: 1507 TIRYEESIAKLKTEIESGGMLVPHDQQLVLKRSDAAEAQVAKVSMMELLKQLLP 1560
>DQ398885-1|ABD61601.1| 2043|Drosophila melanogaster Dicer-1 protein.
Length = 2043
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -2
Query: 633 TSYYQEEVSKIVRVIIAGGVFANHSDESVLNESDVISSAELVDSLAAAISGVAP 472
T Y+E ++K+ I +GG+ H + VL SD + S+ + + P
Sbjct: 1507 TIRYEESIAKLKTEIESGGMLVPHDQQLVLKRSDAAEAQVAKVSMMELLKQLLP 1560
>AY061063-1|AAL28611.1| 302|Drosophila melanogaster LD03380p
protein.
Length = 302
Score = 28.7 bits (61), Expect = 9.4
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -2
Query: 411 HYCLFPKATEYKSFRRVSNPYECEIGGLLCLGTSGEPVKDIMRYSNLD 268
H L P T + RR+ P + GLLC +P KD M + D
Sbjct: 171 HGGLSPDLTSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGWGEND 218
>AY050230-1|AAK84929.1| 865|Drosophila melanogaster SD01621p
protein.
Length = 865
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -2
Query: 633 TSYYQEEVSKIVRVIIAGGVFANHSDESVLNESDVISSAELVDSLAAAISGVAP 472
T Y+E ++K+ I +GG+ H + VL SD + S+ + + P
Sbjct: 180 TIRYEESIAKLKTEIESGGMLVPHDQQLVLKRSDAAEAQVAKVSMMELLKQLLP 233
>AE014297-4282|AAF56829.1| 700|Drosophila melanogaster CG14527-PA
protein.
Length = 700
Score = 28.7 bits (61), Expect = 9.4
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -3
Query: 185 VWIQIHLLFITVQLFILVEMLMNLELPYMKE--KKGNASE*XQF 60
+WI H+L + V E ++N + PYMKE ++ A+E F
Sbjct: 8 IWIASHVLSVLVLAAPTSEDVLNQDTPYMKELMRQAKAAEIESF 51
>AE014297-3226|AAF56056.1| 2249|Drosophila melanogaster CG4792-PA
protein.
Length = 2249
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -2
Query: 633 TSYYQEEVSKIVRVIIAGGVFANHSDESVLNESDVISSAELVDSLAAAISGVAP 472
T Y+E ++K+ I +GG+ H + VL SD + S+ + + P
Sbjct: 1564 TIRYEESIAKLKTEIESGGMLVPHDQQLVLKRSDAAEAQVAKVSMMELLKQLLP 1617
>AE014297-1518|AAF54810.1| 302|Drosophila melanogaster CG5650-PA
protein.
Length = 302
Score = 28.7 bits (61), Expect = 9.4
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -2
Query: 411 HYCLFPKATEYKSFRRVSNPYECEIGGLLCLGTSGEPVKDIMRYSNLD 268
H L P T + RR+ P + GLLC +P KD M + D
Sbjct: 171 HGGLSPDLTSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGWGEND 218
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,058,147
Number of Sequences: 53049
Number of extensions: 611153
Number of successful extensions: 1437
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1434
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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