Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12a15
(910 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456475-1|CAG30361.1| 142|Homo sapiens dJ508I15.5 protein. 55 4e-07
BC009363-1|AAH09363.1| 142|Homo sapiens translocase of outer mi... 55 4e-07
AL021707-3|CAI21602.1| 142|Homo sapiens protein ( Human DNA seq... 55 4e-07
AK223021-1|BAD96741.1| 142|Homo sapiens mitochondrial import re... 55 4e-07
AK024731-1|BAB14979.1| 142|Homo sapiens protein ( Homo sapiens ... 55 4e-07
AB041906-1|BAB16408.1| 142|Homo sapiens Tom22 protein. 55 4e-07
AB040119-1|BAB03306.1| 142|Homo sapiens mitochondrial import re... 55 4e-07
X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for ... 31 5.8
X04146-1|CAA27765.1| 1400|Homo sapiens protein ( Human mRNA frag... 31 5.8
M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor pro... 31 5.8
M10321-1|AAB59512.1| 2074|Homo sapiens F8VWF protein. 31 5.8
>CR456475-1|CAG30361.1| 142|Homo sapiens dJ508I15.5 protein.
Length = 142
Score = 54.8 bits (126), Expect = 4e-07
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = -2
Query: 891 PECVRNGTYXXXTNTWSGIKGLYGLSRSVMWVXASSSVILFAPVIFEVERAQVAEMEKSQ 712
PE VR+ + + +Y SR+ +W+ +S +IL PV+FE E+ Q+ + ++ Q
Sbjct: 56 PERVRSAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQ 115
Query: 711 QKQVLLGTNT 682
Q+Q+LLG NT
Sbjct: 116 QRQILLGPNT 125
>BC009363-1|AAH09363.1| 142|Homo sapiens translocase of outer
mitochondrial membrane 22 homolog (yeast) protein.
Length = 142
Score = 54.8 bits (126), Expect = 4e-07
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = -2
Query: 891 PECVRNGTYXXXTNTWSGIKGLYGLSRSVMWVXASSSVILFAPVIFEVERAQVAEMEKSQ 712
PE VR+ + + +Y SR+ +W+ +S +IL PV+FE E+ Q+ + ++ Q
Sbjct: 56 PERVRSAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQ 115
Query: 711 QKQVLLGTNT 682
Q+Q+LLG NT
Sbjct: 116 QRQILLGPNT 125
>AL021707-3|CAI21602.1| 142|Homo sapiens protein ( Human DNA
sequence from clone RP3-508I15 on chromosome 22q12-13.
).
Length = 142
Score = 54.8 bits (126), Expect = 4e-07
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = -2
Query: 891 PECVRNGTYXXXTNTWSGIKGLYGLSRSVMWVXASSSVILFAPVIFEVERAQVAEMEKSQ 712
PE VR+ + + +Y SR+ +W+ +S +IL PV+FE E+ Q+ + ++ Q
Sbjct: 56 PERVRSAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQ 115
Query: 711 QKQVLLGTNT 682
Q+Q+LLG NT
Sbjct: 116 QRQILLGPNT 125
>AK223021-1|BAD96741.1| 142|Homo sapiens mitochondrial import
receptor Tom22 variant protein.
Length = 142
Score = 54.8 bits (126), Expect = 4e-07
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = -2
Query: 891 PECVRNGTYXXXTNTWSGIKGLYGLSRSVMWVXASSSVILFAPVIFEVERAQVAEMEKSQ 712
PE VR+ + + +Y SR+ +W+ +S +IL PV+FE E+ Q+ + ++ Q
Sbjct: 56 PERVRSAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQ 115
Query: 711 QKQVLLGTNT 682
Q+Q+LLG NT
Sbjct: 116 QRQILLGPNT 125
>AK024731-1|BAB14979.1| 142|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21078 fis, clone CAS02162. ).
Length = 142
Score = 54.8 bits (126), Expect = 4e-07
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = -2
Query: 891 PECVRNGTYXXXTNTWSGIKGLYGLSRSVMWVXASSSVILFAPVIFEVERAQVAEMEKSQ 712
PE VR+ + + +Y SR+ +W+ +S +IL PV+FE E+ Q+ + ++ Q
Sbjct: 56 PERVRSAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQ 115
Query: 711 QKQVLLGTNT 682
Q+Q+LLG NT
Sbjct: 116 QRQILLGPNT 125
>AB041906-1|BAB16408.1| 142|Homo sapiens Tom22 protein.
Length = 142
Score = 54.8 bits (126), Expect = 4e-07
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = -2
Query: 891 PECVRNGTYXXXTNTWSGIKGLYGLSRSVMWVXASSSVILFAPVIFEVERAQVAEMEKSQ 712
PE VR+ + + +Y SR+ +W+ +S +IL PV+FE E+ Q+ + ++ Q
Sbjct: 56 PERVRSAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQ 115
Query: 711 QKQVLLGTNT 682
Q+Q+LLG NT
Sbjct: 116 QRQILLGPNT 125
>AB040119-1|BAB03306.1| 142|Homo sapiens mitochondrial import
receptor Tom22 protein.
Length = 142
Score = 54.8 bits (126), Expect = 4e-07
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = -2
Query: 891 PECVRNGTYXXXTNTWSGIKGLYGLSRSVMWVXASSSVILFAPVIFEVERAQVAEMEKSQ 712
PE VR+ + + +Y SR+ +W+ +S +IL PV+FE E+ Q+ + ++ Q
Sbjct: 56 PERVRSAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEKLQMEQQQQLQ 115
Query: 711 QKQVLLGTNT 682
Q+Q+LLG NT
Sbjct: 116 QRQILLGPNT 125
>X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for
pre-pro-von Willebrand factor. ).
Length = 2813
Score = 31.1 bits (67), Expect = 5.8
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -1
Query: 769 CSCHI*GRKXXXSRNGKVTTKTGVIRDKHSYGRTHACDATNATINYV-YLTE*AIIYI 599
C C G++ K+ T V RD+ H CDAT +TI YLT + Y+
Sbjct: 827 CPCFHQGKEYAPGETVKIGCNTCVCRDRKWNCTDHVCDATCSTIGMAHYLTFDGLKYL 884
>X04146-1|CAA27765.1| 1400|Homo sapiens protein ( Human mRNA fragment
(5'terminus) for von Willebrand factor (vWF). ).
Length = 1400
Score = 31.1 bits (67), Expect = 5.8
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -1
Query: 769 CSCHI*GRKXXXSRNGKVTTKTGVIRDKHSYGRTHACDATNATINYV-YLTE*AIIYI 599
C C G++ K+ T V RD+ H CDAT +TI YLT + Y+
Sbjct: 827 CPCFHQGKEYAPGETVKIGCNTCVCRDRKWNCTDHVCDATCSTIGMAHYLTFDGLKYL 884
>M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor protein.
Length = 2813
Score = 31.1 bits (67), Expect = 5.8
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -1
Query: 769 CSCHI*GRKXXXSRNGKVTTKTGVIRDKHSYGRTHACDATNATINYV-YLTE*AIIYI 599
C C G++ K+ T V RD+ H CDAT +TI YLT + Y+
Sbjct: 827 CPCFHQGKEYAPGETVKIGCNTCVCRDRKWNCTDHVCDATCSTIGMAHYLTFDGLKYL 884
>M10321-1|AAB59512.1| 2074|Homo sapiens F8VWF protein.
Length = 2074
Score = 31.1 bits (67), Expect = 5.8
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -1
Query: 769 CSCHI*GRKXXXSRNGKVTTKTGVIRDKHSYGRTHACDATNATINYV-YLTE*AIIYI 599
C C G++ K+ T V RD+ H CDAT +TI YLT + Y+
Sbjct: 88 CPCFHQGKEYAPGETVKIGCNTCVCRDRKWNCTDHVCDATCSTIGMAHYLTFDGLKYL 145
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,522,944
Number of Sequences: 237096
Number of extensions: 2180253
Number of successful extensions: 2858
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2857
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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