Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte12a15
         (910 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122211-1|AAM52723.1|  148|Drosophila melanogaster LP07226p pro...    76   6e-14
AF241222-1|AAF67180.1|  148|Drosophila melanogaster mitochondria...    76   6e-14
AE014296-717|AAF47809.1|  148|Drosophila melanogaster CG14981-PA...    76   6e-14
AE014296-716|AAG22242.1|  122|Drosophila melanogaster CG14981-PB...    76   6e-14
AE014297-1208|AAG22141.1|  503|Drosophila melanogaster CG4655-PA...    32   1.2  

>AY122211-1|AAM52723.1|  148|Drosophila melanogaster LP07226p
           protein.
          Length = 148

 Score = 76.2 bits (179), Expect = 6e-14
 Identities = 37/67 (55%), Positives = 45/67 (67%)
 Frame = -2

Query: 891 PECVRNGTYXXXTNTWSGIKGLYGLSRSVMWVXASSSVILFAPVIFEVERAQVAEMEKSQ 712
           PE VRN      + T   +KG Y  S +  W+  +S+VILFAPVIFE ERAQ+ E+ KSQ
Sbjct: 64  PEPVRNAVGAVSSATVKSVKGFYSFSCNASWIFFTSAVILFAPVIFETERAQMEELHKSQ 123

Query: 711 QKQVLLG 691
           QKQVLLG
Sbjct: 124 QKQVLLG 130


>AF241222-1|AAF67180.1|  148|Drosophila melanogaster mitochondrial
           import protein protein.
          Length = 148

 Score = 76.2 bits (179), Expect = 6e-14
 Identities = 37/67 (55%), Positives = 45/67 (67%)
 Frame = -2

Query: 891 PECVRNGTYXXXTNTWSGIKGLYGLSRSVMWVXASSSVILFAPVIFEVERAQVAEMEKSQ 712
           PE VRN      + T   +KG Y  S +  W+  +S+VILFAPVIFE ERAQ+ E+ KSQ
Sbjct: 64  PEPVRNAVGAVSSATVKSVKGFYSFSCNASWIFFTSAVILFAPVIFETERAQMEELHKSQ 123

Query: 711 QKQVLLG 691
           QKQVLLG
Sbjct: 124 QKQVLLG 130


>AE014296-717|AAF47809.1|  148|Drosophila melanogaster CG14981-PA,
           isoform A protein.
          Length = 148

 Score = 76.2 bits (179), Expect = 6e-14
 Identities = 37/67 (55%), Positives = 45/67 (67%)
 Frame = -2

Query: 891 PECVRNGTYXXXTNTWSGIKGLYGLSRSVMWVXASSSVILFAPVIFEVERAQVAEMEKSQ 712
           PE VRN      + T   +KG Y  S +  W+  +S+VILFAPVIFE ERAQ+ E+ KSQ
Sbjct: 64  PEPVRNAVGAVSSATVKSVKGFYSFSCNASWIFFTSAVILFAPVIFETERAQMEELHKSQ 123

Query: 711 QKQVLLG 691
           QKQVLLG
Sbjct: 124 QKQVLLG 130


>AE014296-716|AAG22242.1|  122|Drosophila melanogaster CG14981-PB,
           isoform B protein.
          Length = 122

 Score = 76.2 bits (179), Expect = 6e-14
 Identities = 37/67 (55%), Positives = 45/67 (67%)
 Frame = -2

Query: 891 PECVRNGTYXXXTNTWSGIKGLYGLSRSVMWVXASSSVILFAPVIFEVERAQVAEMEKSQ 712
           PE VRN      + T   +KG Y  S +  W+  +S+VILFAPVIFE ERAQ+ E+ KSQ
Sbjct: 38  PEPVRNAVGAVSSATVKSVKGFYSFSCNASWIFFTSAVILFAPVIFETERAQMEELHKSQ 97

Query: 711 QKQVLLG 691
           QKQVLLG
Sbjct: 98  QKQVLLG 104


>AE014297-1208|AAG22141.1|  503|Drosophila melanogaster CG4655-PA,
           isoform A protein.
          Length = 503

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -3

Query: 653 HQCHDKLRLSHRISNHLHIDLSHVKHNNVVQHSYQNK 543
           H  H +L+  HR  +H H  L H  H++  QH++QN+
Sbjct: 76  HHHHHRLKQHHRHHHHHH-RLQHHHHHHQQQHNHQNQ 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,697,838
Number of Sequences: 53049
Number of extensions: 661857
Number of successful extensions: 1461
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1460
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)