Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12a14
(529 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 30 0.017
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 26 0.27
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 26 0.27
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 24 0.84
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 24 0.84
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 24 0.84
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 24 0.84
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 24 0.84
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 24 0.84
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 24 0.84
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 24 1.1
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 2.6
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 22 4.5
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 22 4.5
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 5.9
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 29.9 bits (64), Expect = 0.017
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 425 NCYNFSKSTSNYENVYRKNQKYVLWNRKVNIE 330
N YN++ + +NY N Y N K + + +NIE
Sbjct: 90 NNYNYNNNYNNYNNNYNTNYKKLQYYNIINIE 121
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.8 bits (54), Expect = 0.27
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 428 WNCYNFSKSTSNYENVYRKNQKYVLWNRKVNIE 330
+N YN + +NY N Y N K + N +NIE
Sbjct: 94 YNNYN-NNYNNNYNNNYNNNYKKLYKNYIINIE 125
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.8 bits (54), Expect = 0.27
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 428 WNCYNFSKSTSNYENVYRKNQKYVLWNRKVNIE 330
+N YN + +NY N Y N K + N +NIE
Sbjct: 94 YNNYN-NNYNNNYNNNYNNNYKKLYKNYIINIE 125
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 0.84
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 425 NCYNFSKSTSNYENVYRKNQKYVLWNRKVNIE 330
N Y +S + +NY N Y N K + + +NIE
Sbjct: 87 NNYKYS-NYNNYNNNYNTNYKKLQYYNIINIE 117
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 0.84
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 425 NCYNFSKSTSNYENVYRKNQKYVLWNRKVNIE 330
N Y +S + +NY N Y N K + + +NIE
Sbjct: 87 NNYKYS-NYNNYNNNYNTNYKKLQYYNIINIE 117
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 0.84
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 425 NCYNFSKSTSNYENVYRKNQKYVLWNRKVNIE 330
N Y +S + +NY N Y N K + + +NIE
Sbjct: 87 NNYKYS-NYNNYNNNYNTNYKKLQYYNIINIE 117
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 0.84
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 425 NCYNFSKSTSNYENVYRKNQKYVLWNRKVNIE 330
N Y +S + +NY N Y N K + + +NIE
Sbjct: 87 NNYKYS-NYNNYNNNYNTNYKKLQYYNIINIE 117
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 0.84
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 425 NCYNFSKSTSNYENVYRKNQKYVLWNRKVNIE 330
N Y +S + +NY N Y N K + + +NIE
Sbjct: 87 NNYKYS-NYNNYNNNYNTNYKKLQYYNIINIE 117
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 0.84
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 425 NCYNFSKSTSNYENVYRKNQKYVLWNRKVNIE 330
N Y +S + +NY N Y N K + + +NIE
Sbjct: 87 NNYKYS-NYNNYNNNYNTNYKKLQYYNIINIE 117
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 0.84
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 425 NCYNFSKSTSNYENVYRKNQKYVLWNRKVNIE 330
N Y +S + +NY N Y N K + + +NIE
Sbjct: 87 NNYKYS-NYNNYNNNYNTNYKKLQYYNIINIE 117
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.8 bits (49), Expect = 1.1
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -3
Query: 395 NYENVYRKNQKYVLWNRKVNIEIDTLRCLSVPM 297
NY N N Y +N+K+ I+ + + VP+
Sbjct: 90 NYSNYNNYNNNYNNYNKKLYYNINYIEQIPVPV 122
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.6 bits (46), Expect = 2.6
Identities = 11/46 (23%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -3
Query: 425 NCYNFSKSTSNYENVYRKNQKYVLWNRKVNIEIDT-LRCLSVPMRS 291
N N++ +NY N Y+K + + ++ + + + C + P RS
Sbjct: 333 NYNNYNNYNNNYNNNYKKLYYNINYIEQIPVPVPVPIYCGNFPPRS 378
Score = 21.8 bits (44), Expect = 4.5
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = -3
Query: 416 NFSKSTSNYENVYRKNQKYVLWNRKVNIEIDTLRCLSVPM 297
N++ +NY N N Y +K+ I+ + + VP+
Sbjct: 326 NYNNYNNNYNNYNNYNNNYNNNYKKLYYNINYIEQIPVPV 365
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.8 bits (44), Expect = 4.5
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 359 VLWNRKVNIEIDTLRCLSVPMRSCLLL 279
V W RKV IEI L LS S ++L
Sbjct: 504 VAWRRKVTIEI--LNSLSATKLSKIIL 528
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.8 bits (44), Expect = 4.5
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 359 VLWNRKVNIEIDTLRCLSVPMRSCLLL 279
V W RKV IEI L LS S ++L
Sbjct: 542 VAWRRKVTIEI--LNSLSATKLSKIIL 566
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.4 bits (43), Expect = 5.9
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 398 SNYENVYRKNQKYVLWNRKVNIE 330
SNY N N+K N +NIE
Sbjct: 92 SNYNNYNNYNKKLYYKNYIINIE 114
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,994
Number of Sequences: 438
Number of extensions: 2757
Number of successful extensions: 25
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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