Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12a13
(728 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D16562-1|BAA03996.1| 298|Homo sapiens ATP synthase gamma-subuni... 252 1e-66
D16561-2|BAA03995.1| 298|Homo sapiens ATP synthase gamma-subuni... 252 1e-66
CR457403-1|CAG33684.1| 298|Homo sapiens ATP5C1 protein. 252 1e-66
BC026049-1|AAH26049.1| 291|Homo sapiens Unknown (protein for IM... 252 1e-66
BC020824-1|AAH20824.1| 298|Homo sapiens ATP synthase, H+ transp... 252 1e-66
BC016812-1|AAH16812.1| 298|Homo sapiens ATP synthase, H+ transp... 252 1e-66
BC013394-1|AAH13394.1| 298|Homo sapiens ATP synthase, H+ transp... 252 1e-66
BC000931-1|AAH00931.1| 298|Homo sapiens ATP synthase, H+ transp... 252 1e-66
BC000470-1|AAH00470.1| 298|Homo sapiens ATP synthase, H+ transp... 252 1e-66
AL353754-3|CAH73453.1| 298|Homo sapiens ATP synthase, H+ transp... 252 1e-66
AL158044-8|CAI12960.1| 298|Homo sapiens ATP synthase, H+ transp... 252 1e-66
D16563-1|BAA03997.1| 297|Homo sapiens ATP synthase gamma-subuni... 250 5e-66
D16561-1|BAA03994.1| 297|Homo sapiens ATP synthase gamma-subuni... 250 5e-66
AL353754-4|CAH73454.1| 297|Homo sapiens ATP synthase, H+ transp... 250 5e-66
AL158044-9|CAI12961.1| 297|Homo sapiens ATP synthase, H+ transp... 250 5e-66
AL163281-2|CAB90444.1| 1029|Homo sapiens human CHD2-52 down synd... 30 7.4
AF289030-1|AAL56711.1| 1746|Homo sapiens Down syndrome cell adhe... 30 7.4
AF217525-1|AAF27525.1| 2012|Homo sapiens Down syndrome cell adhe... 30 7.4
AF023450-1|AAC17967.1| 1571|Homo sapiens Down syndrome cell adhe... 30 7.4
AF023449-1|AAC17966.1| 1896|Homo sapiens Down syndrome cell adhe... 30 7.4
AB209136-1|BAD92373.1| 2023|Homo sapiens Down syndrome cell adhe... 30 7.4
X95486-1|CAA64752.1| 1640|Homo sapiens clathrin heavy chain poly... 30 9.8
U60803-1|AAB40909.1| 1569|Homo sapiens clathrin heavy chain 2 pr... 30 9.8
U60802-1|AAB40908.1| 1626|Homo sapiens clathrin heavy chain 2 pr... 30 9.8
U41763-1|AAC50494.1| 1640|Homo sapiens muscle clathrin heavy cha... 30 9.8
AF265555-1|AAF75772.1| 4829|Homo sapiens ubiquitin-conjugating B... 30 9.8
AB033115-1|BAA86603.2| 2793|Homo sapiens KIAA1289 protein protein. 30 9.8
>D16562-1|BAA03996.1| 298|Homo sapiens ATP synthase gamma-subunit
protein.
Length = 298
Score = 252 bits (617), Expect = 1e-66
Identities = 117/214 (54%), Positives = 162/214 (75%), Gaps = 2/214 (0%)
Frame = -2
Query: 721 PEDDPKQLFVXMTSDRGLCGAVHTGVSKVIRNRLSEPGA--ENIKVICVGDKSRGILQRL 548
PED K L + ++SDRGLCGA+H+ ++K +++ ++ A + + ++ +GDK RGIL R
Sbjct: 85 PEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRT 144
Query: 547 YGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLY 368
+ + E+GR PPTF DAS +A +L SGYEF G II+NKF+SV+SY + P++
Sbjct: 145 HSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIF 204
Query: 367 TKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNA 188
+ ++ SA ++ YD +D+DVLQ+Y E++LA++++Y+LKE SEQS+RMTAMDNASKNA
Sbjct: 205 SLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNA 264
Query: 187 GEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 86
EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 265 SEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>D16561-2|BAA03995.1| 298|Homo sapiens ATP synthase gamma-subunit
protein.
Length = 298
Score = 252 bits (617), Expect = 1e-66
Identities = 117/214 (54%), Positives = 162/214 (75%), Gaps = 2/214 (0%)
Frame = -2
Query: 721 PEDDPKQLFVXMTSDRGLCGAVHTGVSKVIRNRLSEPGA--ENIKVICVGDKSRGILQRL 548
PED K L + ++SDRGLCGA+H+ ++K +++ ++ A + + ++ +GDK RGIL R
Sbjct: 85 PEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRT 144
Query: 547 YGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLY 368
+ + E+GR PPTF DAS +A +L SGYEF G II+NKF+SV+SY + P++
Sbjct: 145 HSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIF 204
Query: 367 TKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNA 188
+ ++ SA ++ YD +D+DVLQ+Y E++LA++++Y+LKE SEQS+RMTAMDNASKNA
Sbjct: 205 SLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNA 264
Query: 187 GEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 86
EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 265 SEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>CR457403-1|CAG33684.1| 298|Homo sapiens ATP5C1 protein.
Length = 298
Score = 252 bits (617), Expect = 1e-66
Identities = 117/214 (54%), Positives = 162/214 (75%), Gaps = 2/214 (0%)
Frame = -2
Query: 721 PEDDPKQLFVXMTSDRGLCGAVHTGVSKVIRNRLSEPGA--ENIKVICVGDKSRGILQRL 548
PED K L + ++SDRGLCGA+H+ ++K +++ ++ A + + ++ +GDK RGIL R
Sbjct: 85 PEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRT 144
Query: 547 YGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLY 368
+ + E+GR PPTF DAS +A +L SGYEF G II+NKF+SV+SY + P++
Sbjct: 145 HSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIF 204
Query: 367 TKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNA 188
+ ++ SA ++ YD +D+DVLQ+Y E++LA++++Y+LKE SEQS+RMTAMDNASKNA
Sbjct: 205 SLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNA 264
Query: 187 GEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 86
EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 265 SEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>BC026049-1|AAH26049.1| 291|Homo sapiens Unknown (protein for
IMAGE:4908447) protein.
Length = 291
Score = 252 bits (617), Expect = 1e-66
Identities = 117/214 (54%), Positives = 162/214 (75%), Gaps = 2/214 (0%)
Frame = -2
Query: 721 PEDDPKQLFVXMTSDRGLCGAVHTGVSKVIRNRLSEPGA--ENIKVICVGDKSRGILQRL 548
PED K L + ++SDRGLCGA+H+ ++K +++ ++ A + + ++ +GDK RGIL R
Sbjct: 78 PEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRT 137
Query: 547 YGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLY 368
+ + E+GR PPTF DAS +A +L SGYEF G II+NKF+SV+SY + P++
Sbjct: 138 HSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIF 197
Query: 367 TKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNA 188
+ ++ SA ++ YD +D+DVLQ+Y E++LA++++Y+LKE SEQS+RMTAMDNASKNA
Sbjct: 198 SLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNA 257
Query: 187 GEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 86
EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 258 SEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 291
>BC020824-1|AAH20824.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 252 bits (617), Expect = 1e-66
Identities = 117/214 (54%), Positives = 162/214 (75%), Gaps = 2/214 (0%)
Frame = -2
Query: 721 PEDDPKQLFVXMTSDRGLCGAVHTGVSKVIRNRLSEPGA--ENIKVICVGDKSRGILQRL 548
PED K L + ++SDRGLCGA+H+ ++K +++ ++ A + + ++ +GDK RGIL R
Sbjct: 85 PEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRT 144
Query: 547 YGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLY 368
+ + E+GR PPTF DAS +A +L SGYEF G II+NKF+SV+SY + P++
Sbjct: 145 HSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIF 204
Query: 367 TKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNA 188
+ ++ SA ++ YD +D+DVLQ+Y E++LA++++Y+LKE SEQS+RMTAMDNASKNA
Sbjct: 205 SLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNA 264
Query: 187 GEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 86
EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 265 SEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>BC016812-1|AAH16812.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 252 bits (617), Expect = 1e-66
Identities = 117/214 (54%), Positives = 162/214 (75%), Gaps = 2/214 (0%)
Frame = -2
Query: 721 PEDDPKQLFVXMTSDRGLCGAVHTGVSKVIRNRLSEPGA--ENIKVICVGDKSRGILQRL 548
PED K L + ++SDRGLCGA+H+ ++K +++ ++ A + + ++ +GDK RGIL R
Sbjct: 85 PEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRT 144
Query: 547 YGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLY 368
+ + E+GR PPTF DAS +A +L SGYEF G II+NKF+SV+SY + P++
Sbjct: 145 HSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIF 204
Query: 367 TKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNA 188
+ ++ SA ++ YD +D+DVLQ+Y E++LA++++Y+LKE SEQS+RMTAMDNASKNA
Sbjct: 205 SLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNA 264
Query: 187 GEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 86
EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 265 SEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>BC013394-1|AAH13394.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 252 bits (617), Expect = 1e-66
Identities = 117/214 (54%), Positives = 162/214 (75%), Gaps = 2/214 (0%)
Frame = -2
Query: 721 PEDDPKQLFVXMTSDRGLCGAVHTGVSKVIRNRLSEPGA--ENIKVICVGDKSRGILQRL 548
PED K L + ++SDRGLCGA+H+ ++K +++ ++ A + + ++ +GDK RGIL R
Sbjct: 85 PEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRT 144
Query: 547 YGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLY 368
+ + E+GR PPTF DAS +A +L SGYEF G II+NKF+SV+SY + P++
Sbjct: 145 HSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIF 204
Query: 367 TKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNA 188
+ ++ SA ++ YD +D+DVLQ+Y E++LA++++Y+LKE SEQS+RMTAMDNASKNA
Sbjct: 205 SLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNA 264
Query: 187 GEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 86
EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 265 SEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>BC000931-1|AAH00931.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 252 bits (617), Expect = 1e-66
Identities = 117/214 (54%), Positives = 162/214 (75%), Gaps = 2/214 (0%)
Frame = -2
Query: 721 PEDDPKQLFVXMTSDRGLCGAVHTGVSKVIRNRLSEPGA--ENIKVICVGDKSRGILQRL 548
PED K L + ++SDRGLCGA+H+ ++K +++ ++ A + + ++ +GDK RGIL R
Sbjct: 85 PEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRT 144
Query: 547 YGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLY 368
+ + E+GR PPTF DAS +A +L SGYEF G II+NKF+SV+SY + P++
Sbjct: 145 HSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIF 204
Query: 367 TKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNA 188
+ ++ SA ++ YD +D+DVLQ+Y E++LA++++Y+LKE SEQS+RMTAMDNASKNA
Sbjct: 205 SLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNA 264
Query: 187 GEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 86
EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 265 SEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>BC000470-1|AAH00470.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 252 bits (617), Expect = 1e-66
Identities = 117/214 (54%), Positives = 162/214 (75%), Gaps = 2/214 (0%)
Frame = -2
Query: 721 PEDDPKQLFVXMTSDRGLCGAVHTGVSKVIRNRLSEPGA--ENIKVICVGDKSRGILQRL 548
PED K L + ++SDRGLCGA+H+ ++K +++ ++ A + + ++ +GDK RGIL R
Sbjct: 85 PEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRT 144
Query: 547 YGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLY 368
+ + E+GR PPTF DAS +A +L SGYEF G II+NKF+SV+SY + P++
Sbjct: 145 HSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIF 204
Query: 367 TKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNA 188
+ ++ SA ++ YD +D+DVLQ+Y E++LA++++Y+LKE SEQS+RMTAMDNASKNA
Sbjct: 205 SLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNA 264
Query: 187 GEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 86
EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 265 SEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>AL353754-3|CAH73453.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 252 bits (617), Expect = 1e-66
Identities = 117/214 (54%), Positives = 162/214 (75%), Gaps = 2/214 (0%)
Frame = -2
Query: 721 PEDDPKQLFVXMTSDRGLCGAVHTGVSKVIRNRLSEPGA--ENIKVICVGDKSRGILQRL 548
PED K L + ++SDRGLCGA+H+ ++K +++ ++ A + + ++ +GDK RGIL R
Sbjct: 85 PEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRT 144
Query: 547 YGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLY 368
+ + E+GR PPTF DAS +A +L SGYEF G II+NKF+SV+SY + P++
Sbjct: 145 HSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIF 204
Query: 367 TKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNA 188
+ ++ SA ++ YD +D+DVLQ+Y E++LA++++Y+LKE SEQS+RMTAMDNASKNA
Sbjct: 205 SLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNA 264
Query: 187 GEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 86
EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 265 SEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>AL158044-8|CAI12960.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 252 bits (617), Expect = 1e-66
Identities = 117/214 (54%), Positives = 162/214 (75%), Gaps = 2/214 (0%)
Frame = -2
Query: 721 PEDDPKQLFVXMTSDRGLCGAVHTGVSKVIRNRLSEPGA--ENIKVICVGDKSRGILQRL 548
PED K L + ++SDRGLCGA+H+ ++K +++ ++ A + + ++ +GDK RGIL R
Sbjct: 85 PEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRT 144
Query: 547 YGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLY 368
+ + E+GR PPTF DAS +A +L SGYEF G II+NKF+SV+SY + P++
Sbjct: 145 HSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIF 204
Query: 367 TKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNA 188
+ ++ SA ++ YD +D+DVLQ+Y E++LA++++Y+LKE SEQS+RMTAMDNASKNA
Sbjct: 205 SLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNA 264
Query: 187 GEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 86
EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 265 SEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>D16563-1|BAA03997.1| 297|Homo sapiens ATP synthase gamma-subunit
protein.
Length = 297
Score = 250 bits (611), Expect = 5e-66
Identities = 116/213 (54%), Positives = 161/213 (75%), Gaps = 2/213 (0%)
Frame = -2
Query: 721 PEDDPKQLFVXMTSDRGLCGAVHTGVSKVIRNRLSEPGA--ENIKVICVGDKSRGILQRL 548
PED K L + ++SDRGLCGA+H+ ++K +++ ++ A + + ++ +GDK RGIL R
Sbjct: 85 PEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRT 144
Query: 547 YGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLY 368
+ + E+GR PPTF DAS +A +L SGYEF G II+NKF+SV+SY + P++
Sbjct: 145 HSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIF 204
Query: 367 TKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNA 188
+ ++ SA ++ YD +D+DVLQ+Y E++LA++++Y+LKE SEQS+RMTAMDNASKNA
Sbjct: 205 SLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNA 264
Query: 187 GEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 89
EMIDKLTLTFNRTRQAVIT+ELIEIISGAAAL
Sbjct: 265 SEMIDKLTLTFNRTRQAVITKELIEIISGAAAL 297
>D16561-1|BAA03994.1| 297|Homo sapiens ATP synthase gamma-subunit
protein.
Length = 297
Score = 250 bits (611), Expect = 5e-66
Identities = 116/213 (54%), Positives = 161/213 (75%), Gaps = 2/213 (0%)
Frame = -2
Query: 721 PEDDPKQLFVXMTSDRGLCGAVHTGVSKVIRNRLSEPGA--ENIKVICVGDKSRGILQRL 548
PED K L + ++SDRGLCGA+H+ ++K +++ ++ A + + ++ +GDK RGIL R
Sbjct: 85 PEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRT 144
Query: 547 YGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLY 368
+ + E+GR PPTF DAS +A +L SGYEF G II+NKF+SV+SY + P++
Sbjct: 145 HSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIF 204
Query: 367 TKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNA 188
+ ++ SA ++ YD +D+DVLQ+Y E++LA++++Y+LKE SEQS+RMTAMDNASKNA
Sbjct: 205 SLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNA 264
Query: 187 GEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 89
EMIDKLTLTFNRTRQAVIT+ELIEIISGAAAL
Sbjct: 265 SEMIDKLTLTFNRTRQAVITKELIEIISGAAAL 297
>AL353754-4|CAH73454.1| 297|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 297
Score = 250 bits (611), Expect = 5e-66
Identities = 116/213 (54%), Positives = 161/213 (75%), Gaps = 2/213 (0%)
Frame = -2
Query: 721 PEDDPKQLFVXMTSDRGLCGAVHTGVSKVIRNRLSEPGA--ENIKVICVGDKSRGILQRL 548
PED K L + ++SDRGLCGA+H+ ++K +++ ++ A + + ++ +GDK RGIL R
Sbjct: 85 PEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRT 144
Query: 547 YGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLY 368
+ + E+GR PPTF DAS +A +L SGYEF G II+NKF+SV+SY + P++
Sbjct: 145 HSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIF 204
Query: 367 TKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNA 188
+ ++ SA ++ YD +D+DVLQ+Y E++LA++++Y+LKE SEQS+RMTAMDNASKNA
Sbjct: 205 SLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNA 264
Query: 187 GEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 89
EMIDKLTLTFNRTRQAVIT+ELIEIISGAAAL
Sbjct: 265 SEMIDKLTLTFNRTRQAVITKELIEIISGAAAL 297
>AL158044-9|CAI12961.1| 297|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 297
Score = 250 bits (611), Expect = 5e-66
Identities = 116/213 (54%), Positives = 161/213 (75%), Gaps = 2/213 (0%)
Frame = -2
Query: 721 PEDDPKQLFVXMTSDRGLCGAVHTGVSKVIRNRLSEPGA--ENIKVICVGDKSRGILQRL 548
PED K L + ++SDRGLCGA+H+ ++K +++ ++ A + + ++ +GDK RGIL R
Sbjct: 85 PEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRT 144
Query: 547 YGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLY 368
+ + E+GR PPTF DAS +A +L SGYEF G II+NKF+SV+SY + P++
Sbjct: 145 HSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIF 204
Query: 367 TKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNA 188
+ ++ SA ++ YD +D+DVLQ+Y E++LA++++Y+LKE SEQS+RMTAMDNASKNA
Sbjct: 205 SLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNA 264
Query: 187 GEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 89
EMIDKLTLTFNRTRQAVIT+ELIEIISGAAAL
Sbjct: 265 SEMIDKLTLTFNRTRQAVITKELIEIISGAAAL 297
>AL163281-2|CAB90444.1| 1029|Homo sapiens human CHD2-52 down
syndrome cell adhesion molecule protein.
Length = 1029
Score = 30.3 bits (65), Expect = 7.4
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2
Query: 334 TAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAG 185
T SL+ D L+ YT +S+ L F +G SEQ T D AG
Sbjct: 162 TTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAG 211
>AF289030-1|AAL56711.1| 1746|Homo sapiens Down syndrome cell adhesion
molecule splice variant protein.
Length = 1746
Score = 30.3 bits (65), Expect = 7.4
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2
Query: 334 TAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAG 185
T SL+ D L+ YT +S+ L F +G SEQ T D AG
Sbjct: 897 TTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAG 946
>AF217525-1|AAF27525.1| 2012|Homo sapiens Down syndrome cell adhesion
molecule protein.
Length = 2012
Score = 30.3 bits (65), Expect = 7.4
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2
Query: 334 TAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAG 185
T SL+ D L+ YT +S+ L F +G SEQ T D AG
Sbjct: 1145 TTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAG 1194
>AF023450-1|AAC17967.1| 1571|Homo sapiens Down syndrome cell adhesion
molecule protein.
Length = 1571
Score = 30.3 bits (65), Expect = 7.4
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2
Query: 334 TAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAG 185
T SL+ D L+ YT +S+ L F +G SEQ T D AG
Sbjct: 1145 TTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAG 1194
>AF023449-1|AAC17966.1| 1896|Homo sapiens Down syndrome cell adhesion
molecule protein.
Length = 1896
Score = 30.3 bits (65), Expect = 7.4
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2
Query: 334 TAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAG 185
T SL+ D L+ YT +S+ L F +G SEQ T D AG
Sbjct: 1131 TTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAG 1180
>AB209136-1|BAD92373.1| 2023|Homo sapiens Down syndrome cell adhesion
molecule isoform CHD2-42 precursor variant protein.
Length = 2023
Score = 30.3 bits (65), Expect = 7.4
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2
Query: 334 TAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAG 185
T SL+ D L+ YT +S+ L F +G SEQ T D AG
Sbjct: 1156 TTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAG 1205
>X95486-1|CAA64752.1| 1640|Homo sapiens clathrin heavy chain
polypeptide protein.
Length = 1640
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 630 RITLDTPVCTAPHKPLSEVIXTN 698
RI+ DT TAPHKP S +I N
Sbjct: 297 RISADTIFVTAPHKPTSGIIGVN 319
>U60803-1|AAB40909.1| 1569|Homo sapiens clathrin heavy chain 2
protein.
Length = 1569
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 630 RITLDTPVCTAPHKPLSEVIXTN 698
RI+ DT TAPHKP S +I N
Sbjct: 297 RISADTIFVTAPHKPTSGIIGVN 319
>U60802-1|AAB40908.1| 1626|Homo sapiens clathrin heavy chain 2
protein.
Length = 1626
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 630 RITLDTPVCTAPHKPLSEVIXTN 698
RI+ DT TAPHKP S +I N
Sbjct: 297 RISADTIFVTAPHKPTSGIIGVN 319
>U41763-1|AAC50494.1| 1640|Homo sapiens muscle clathrin heavy chain
protein.
Length = 1640
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 630 RITLDTPVCTAPHKPLSEVIXTN 698
RI+ DT TAPHKP S +I N
Sbjct: 297 RISADTIFVTAPHKPTSGIIGVN 319
>AF265555-1|AAF75772.1| 4829|Homo sapiens ubiquitin-conjugating
BIR-domain enzyme APOLLON protein.
Length = 4829
Score = 29.9 bits (64), Expect = 9.8
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Frame = +2
Query: 287 LRVGLEHVAVQRVVRSQLAGALNRLLSVEGQVGL-GVRDH--RLELVVN---DLSGTKLV 448
+R G + R QL L +L+++ Q+ L G R++ R+ + N +S + V
Sbjct: 2873 IRPGDAKAVCGEMTRDQLMFDLLKLVNILVQLPLSGNREYSARVSVTTNTTDSVSDEEKV 2932
Query: 449 SRGEDSSGQLTCVQESRWETSDLISNTNDVLS 544
S G+D +G T VQ S +DL+ ++S
Sbjct: 2933 SGGKDGNGSSTSVQGSPAYVADLVLANQQIMS 2964
>AB033115-1|BAA86603.2| 2793|Homo sapiens KIAA1289 protein protein.
Length = 2793
Score = 29.9 bits (64), Expect = 9.8
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Frame = +2
Query: 287 LRVGLEHVAVQRVVRSQLAGALNRLLSVEGQVGL-GVRDH--RLELVVN---DLSGTKLV 448
+R G + R QL L +L+++ Q+ L G R++ R+ + N +S + V
Sbjct: 837 IRPGDAKAVCGEMTRDQLMFDLLKLVNILVQLPLSGNREYSARVSVTTNTTDSVSDEEKV 896
Query: 449 SRGEDSSGQLTCVQESRWETSDLISNTNDVLS 544
S G+D +G T VQ S +DL+ ++S
Sbjct: 897 SGGKDGNGSSTSVQGSPAYVADLVLANQQIMS 928
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,801,494
Number of Sequences: 237096
Number of extensions: 1851243
Number of successful extensions: 4446
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4431
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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