Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12a11
(719 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB058761-1|BAB47487.2| 2469|Homo sapiens KIAA1858 protein protein. 34 0.59
BC066975-1|AAH66975.1| 572|Homo sapiens chromosome 3 open readi... 33 1.0
M58285-1|AAA35964.1| 613|Homo sapiens membrane-associated prote... 33 1.4
BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein ... 33 1.4
BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein ... 33 1.4
BC084547-1|AAH84547.1| 712|Homo sapiens NCKAP1L protein protein. 33 1.4
BC064997-1|AAH64997.1| 837|Homo sapiens NCKAP1L protein protein. 33 1.4
BC001604-1|AAH01604.3| 865|Homo sapiens NCKAP1L protein protein. 33 1.4
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 32 2.4
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 32 2.4
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 32 2.4
CR381696-3|CAI95411.1| 266|Homo sapiens dehydrogenase/reductase... 31 4.1
BX649443-3|CAI95432.1| 266|Homo sapiens dehydrogenase/reductase... 31 4.1
BC133023-1|AAI33024.1| 1146|Homo sapiens DENND3 protein protein. 31 4.1
AB076357-1|BAD01544.1| 140|Homo sapiens functionless protein pr... 31 4.1
AB020677-1|BAA74893.2| 1019|Homo sapiens KIAA0870 protein protein. 31 4.1
X04707-1|CAA28412.1| 456|Homo sapiens put.thyroid hormone recep... 31 5.5
M26747-1|AAA35677.1| 456|Homo sapiens c-erbA protein. 31 5.5
BC106930-1|AAI06931.1| 461|Homo sapiens THRB protein protein. 31 5.5
BC106929-1|AAI06930.1| 461|Homo sapiens thyroid hormone recepto... 31 5.5
BC073923-1|AAH73923.1| 247|Homo sapiens coenzyme Q10 homolog A ... 30 7.3
BC047444-1|AAH47444.1| 243|Homo sapiens COQ10A protein protein. 30 7.3
Z46629-1|CAA86598.1| 509|Homo sapiens SOX9 protein. 30 9.6
S74506-1|AAB32870.1| 509|Homo sapiens inactivating mutations as... 30 9.6
EF064715-1|ABK41898.1| 789|Homo sapiens PR domain containing 1,... 30 9.6
BX538130-1|CAD98031.1| 986|Homo sapiens hypothetical protein pr... 30 9.6
BT006875-1|AAP35521.1| 509|Homo sapiens SRY (sex determining re... 30 9.6
BC103835-1|AAI03836.1| 691|Homo sapiens PR domain containing 1,... 30 9.6
BC103834-1|AAI03835.1| 691|Homo sapiens PR domain containing 1,... 30 9.6
BC103833-1|AAI03834.1| 691|Homo sapiens PR domain containing 1,... 30 9.6
BC103832-1|AAI03833.1| 691|Homo sapiens PR domain containing 1,... 30 9.6
BC056420-1|AAH56420.1| 509|Homo sapiens SRY (sex determining re... 30 9.6
BC007951-1|AAH07951.1| 509|Homo sapiens SRY (sex determining re... 30 9.6
AY198415-1|AAO45624.1| 691|Homo sapiens PR domain-containing pr... 30 9.6
AY198414-1|AAO45623.1| 789|Homo sapiens PR domain-containing pr... 30 9.6
AL358952-2|CAI18902.1| 789|Homo sapiens PR domain containing 1,... 30 9.6
AL022067-3|CAI42296.1| 789|Homo sapiens PR domain containing 1,... 30 9.6
AL022067-1|CAD92522.1| 336|Homo sapiens PR domain containing 1,... 30 9.6
AF084199-1|AAC33300.1| 789|Homo sapiens beta-interferon gene po... 30 9.6
>AB058761-1|BAB47487.2| 2469|Homo sapiens KIAA1858 protein protein.
Length = 2469
Score = 33.9 bits (74), Expect = 0.59
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -3
Query: 675 CAACCSRQPTVSKARCRRLST-PSAQPVPPPQMLPSLQLTTPRHRKCKGESQKTH-ISSK 502
CAA P +S+ + R+ P A P P LP+ Q P +KC+ +K+H +S K
Sbjct: 993 CAASFRSGPGLSRHKARKHRPHPGAPAEPSPAALPAQQPLEPLAQKCQPPRKKSHRVSGK 1052
Query: 501 SK 496
+
Sbjct: 1053 ER 1054
>BC066975-1|AAH66975.1| 572|Homo sapiens chromosome 3 open reading
frame 25 protein.
Length = 572
Score = 33.1 bits (72), Expect = 1.0
Identities = 18/73 (24%), Positives = 37/73 (50%)
Frame = -3
Query: 714 SHNLKRHRRRNVNCAACCSRQPTVSKARCRRLSTPSAQPVPPPQMLPSLQLTTPRHRKCK 535
+H K+ ++++ R V + + P++QP PP+ +PS ++ R + +
Sbjct: 39 AHCFKQFQQKDFRLPQTRRRIIMVPRKEDQTPLNPASQPQAPPKPIPSFKVLEARDIQEQ 98
Query: 534 GESQKTHISSKSK 496
E +KT +S +SK
Sbjct: 99 PEDRKTWLSQRSK 111
>M58285-1|AAA35964.1| 613|Homo sapiens membrane-associated protein
HEM-1 protein.
Length = 613
Score = 32.7 bits (71), Expect = 1.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 479 LACVTHIAIYLPLPLLVTTTEGFVQLRRKNHDNGIKCIT 363
+AC+ I + + LPLL T F + + ++N I C+T
Sbjct: 482 VACLLLIFLAVSLPLLATDPSSFYSIEKDGYNNNIHCLT 520
>BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 32.7 bits (71), Expect = 1.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 479 LACVTHIAIYLPLPLLVTTTEGFVQLRRKNHDNGIKCIT 363
+AC+ I + + LPLL T F + + ++N I C+T
Sbjct: 996 VACLLLIFLAVSLPLLATDPSSFYSIEKDGYNNNIHCLT 1034
>BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 32.7 bits (71), Expect = 1.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 479 LACVTHIAIYLPLPLLVTTTEGFVQLRRKNHDNGIKCIT 363
+AC+ I + + LPLL T F + + ++N I C+T
Sbjct: 996 VACLLLIFLAVSLPLLATDPSSFYSIEKDGYNNNIHCLT 1034
>BC084547-1|AAH84547.1| 712|Homo sapiens NCKAP1L protein protein.
Length = 712
Score = 32.7 bits (71), Expect = 1.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 479 LACVTHIAIYLPLPLLVTTTEGFVQLRRKNHDNGIKCIT 363
+AC+ I + + LPLL T F + + ++N I C+T
Sbjct: 581 VACLLLIFLAVSLPLLATDPSSFYSIEKDGYNNNIHCLT 619
>BC064997-1|AAH64997.1| 837|Homo sapiens NCKAP1L protein protein.
Length = 837
Score = 32.7 bits (71), Expect = 1.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 479 LACVTHIAIYLPLPLLVTTTEGFVQLRRKNHDNGIKCIT 363
+AC+ I + + LPLL T F + + ++N I C+T
Sbjct: 706 VACLLLIFLAVSLPLLATDPSSFYSIEKDGYNNNIHCLT 744
>BC001604-1|AAH01604.3| 865|Homo sapiens NCKAP1L protein protein.
Length = 865
Score = 32.7 bits (71), Expect = 1.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 479 LACVTHIAIYLPLPLLVTTTEGFVQLRRKNHDNGIKCIT 363
+AC+ I + + LPLL T F + + ++N I C+T
Sbjct: 734 VACLLLIFLAVSLPLLATDPSSFYSIEKDGYNNNIHCLT 772
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.9 bits (69), Expect = 2.4
Identities = 32/112 (28%), Positives = 44/112 (39%)
Frame = -3
Query: 714 SHNLKRHRRRNVNCAACCSRQPTVSKARCRRLSTPSAQPVPPPQMLPSLQLTTPRHRKCK 535
SH R R R+ + + R+P+ + R TP + PPP+ S R R
Sbjct: 294 SHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSA 353
Query: 534 GESQKTHISSKSKYDWRVPRLCHTYSNLSPAASPRHDDRRIRTASPKKPRQR 379
S + SS S+ R P SP PR R +ASP + R R
Sbjct: 354 SLSGSSSSSSSSRS--RSPPKKPPKRTSSP---PRKTRRLSPSASPPRRRHR 400
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.9 bits (69), Expect = 2.4
Identities = 32/112 (28%), Positives = 44/112 (39%)
Frame = -3
Query: 714 SHNLKRHRRRNVNCAACCSRQPTVSKARCRRLSTPSAQPVPPPQMLPSLQLTTPRHRKCK 535
SH R R R+ + + R+P+ + R TP + PPP+ S R R
Sbjct: 294 SHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSA 353
Query: 534 GESQKTHISSKSKYDWRVPRLCHTYSNLSPAASPRHDDRRIRTASPKKPRQR 379
S + SS S+ R P SP PR R +ASP + R R
Sbjct: 354 SLSGSSSSSSSSRS--RSPPKKPPKRTSSP---PRKTRRLSPSASPPRRRHR 400
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.9 bits (69), Expect = 2.4
Identities = 32/112 (28%), Positives = 44/112 (39%)
Frame = -3
Query: 714 SHNLKRHRRRNVNCAACCSRQPTVSKARCRRLSTPSAQPVPPPQMLPSLQLTTPRHRKCK 535
SH R R R+ + + R+P+ + R TP + PPP+ S R R
Sbjct: 294 SHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSA 353
Query: 534 GESQKTHISSKSKYDWRVPRLCHTYSNLSPAASPRHDDRRIRTASPKKPRQR 379
S + SS S+ R P SP PR R +ASP + R R
Sbjct: 354 SLSGSSSSSSSSRS--RSPPKKPPKRTSSP---PRKTRRLSPSASPPRRRHR 400
>CR381696-3|CAI95411.1| 266|Homo sapiens dehydrogenase/reductase
(SDR family) X-linked protein.
Length = 266
Score = 31.1 bits (67), Expect = 4.1
Identities = 29/106 (27%), Positives = 40/106 (37%), Gaps = 3/106 (2%)
Frame = -3
Query: 693 RRRNVNCAACCSRQ-PTVSKARC--RRLSTPSAQPVPPPQMLPSLQLTTPRHRKCKGESQ 523
R R + CA +R PT+ R RLS QP P P LT P H + G S
Sbjct: 12 RPRRLFCAPGPARPGPTLPSPRVWPPRLSRVGLQPSSPRAAAPPRTLTPPGHGRGPGGSH 71
Query: 522 KTHISSKSKYDWRVPRLCHTYSNLSPAASPRHDDRRIRTASPKKPR 385
+ + ++ +P C P +P R R P P+
Sbjct: 72 ----APRPRHQAALPAACGRPVTARPRQAPEGRSGRPRDLDPYPPQ 113
>BX649443-3|CAI95432.1| 266|Homo sapiens dehydrogenase/reductase
(SDR family) X-linked protein.
Length = 266
Score = 31.1 bits (67), Expect = 4.1
Identities = 29/106 (27%), Positives = 40/106 (37%), Gaps = 3/106 (2%)
Frame = -3
Query: 693 RRRNVNCAACCSRQ-PTVSKARC--RRLSTPSAQPVPPPQMLPSLQLTTPRHRKCKGESQ 523
R R + CA +R PT+ R RLS QP P P LT P H + G S
Sbjct: 12 RPRRLFCAPGPARPGPTLPSPRVWPPRLSRVGLQPSSPRAAAPPRTLTPPGHGRGPGGSH 71
Query: 522 KTHISSKSKYDWRVPRLCHTYSNLSPAASPRHDDRRIRTASPKKPR 385
+ + ++ +P C P +P R R P P+
Sbjct: 72 ----APRPRHQAALPAACGRPVTARPRQAPEGRSGRPRDLDPYPPQ 113
>BC133023-1|AAI33024.1| 1146|Homo sapiens DENND3 protein protein.
Length = 1146
Score = 31.1 bits (67), Expect = 4.1
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = -3
Query: 621 LSTPSAQPVPPPQMLP---SLQLTTPRHRKCKGESQKTHISSKSKYDWRVPRL 472
+S P+ Q + P++ P SL+LT C+G S +++ KS Y +++P +
Sbjct: 419 VSMPNLQDIAMPELAPRNSSLRLTDTAG--CRGSSAVLNVTPKSPYTFKIPEI 469
>AB076357-1|BAD01544.1| 140|Homo sapiens functionless protein
protein.
Length = 140
Score = 31.1 bits (67), Expect = 4.1
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -3
Query: 651 PTVSKARCRRLSTPSAQPVPPPQMLPSLQLTTPRHRK 541
P++S A+ RR S ++P P QML LT+P R+
Sbjct: 78 PSLSTAQHRRSSPSHSRPAPGSQMLTGSSLTSPPGRR 114
>AB020677-1|BAA74893.2| 1019|Homo sapiens KIAA0870 protein protein.
Length = 1019
Score = 31.1 bits (67), Expect = 4.1
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = -3
Query: 621 LSTPSAQPVPPPQMLP---SLQLTTPRHRKCKGESQKTHISSKSKYDWRVPRL 472
+S P+ Q + P++ P SL+LT C+G S +++ KS Y +++P +
Sbjct: 292 VSMPNLQDIAMPELAPRNSSLRLTDTAG--CRGSSAVLNVTPKSPYTFKIPEI 342
>X04707-1|CAA28412.1| 456|Homo sapiens put.thyroid hormone receptor
protein.
Length = 456
Score = 30.7 bits (66), Expect = 5.5
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +2
Query: 476 RGTLQSYFDFDEICVFCD---SPLHLRCLGVVSCR 571
+G + SY D DE+CV C + H RC+ C+
Sbjct: 89 KGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCK 123
>M26747-1|AAA35677.1| 456|Homo sapiens c-erbA protein.
Length = 456
Score = 30.7 bits (66), Expect = 5.5
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +2
Query: 476 RGTLQSYFDFDEICVFCD---SPLHLRCLGVVSCR 571
+G + SY D DE+CV C + H RC+ C+
Sbjct: 89 KGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCK 123
>BC106930-1|AAI06931.1| 461|Homo sapiens THRB protein protein.
Length = 461
Score = 30.7 bits (66), Expect = 5.5
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +2
Query: 476 RGTLQSYFDFDEICVFCD---SPLHLRCLGVVSCR 571
+G + SY D DE+CV C + H RC+ C+
Sbjct: 94 KGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCK 128
>BC106929-1|AAI06930.1| 461|Homo sapiens thyroid hormone receptor,
beta (erythroblastic leukemia viral (v-erb-a) oncogen
protein.
Length = 461
Score = 30.7 bits (66), Expect = 5.5
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +2
Query: 476 RGTLQSYFDFDEICVFCD---SPLHLRCLGVVSCR 571
+G + SY D DE+CV C + H RC+ C+
Sbjct: 94 KGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCK 128
>BC073923-1|AAH73923.1| 247|Homo sapiens coenzyme Q10 homolog A (S.
cerevisiae) protein.
Length = 247
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/21 (66%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -3
Query: 633 RCRRLS-TPSAQPVPPPQMLP 574
RC RLS +P AQP PPP LP
Sbjct: 19 RCCRLSLSPGAQPAPPPGPLP 39
>BC047444-1|AAH47444.1| 243|Homo sapiens COQ10A protein protein.
Length = 243
Score = 30.3 bits (65), Expect = 7.3
Identities = 14/21 (66%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -3
Query: 633 RCRRLS-TPSAQPVPPPQMLP 574
RC RLS +P AQP PPP LP
Sbjct: 15 RCCRLSLSPGAQPAPPPGPLP 35
>Z46629-1|CAA86598.1| 509|Homo sapiens SOX9 protein.
Length = 509
Score = 29.9 bits (64), Expect = 9.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -3
Query: 651 PTVSKARCRRLSTPSAQPVPPPQMLPSLQLTTPRHRKCKGESQKTHISSK 502
P +A + + P QP PPQ + LTT G+SQ+THI ++
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSE--PGQSQRTHIKTE 400
>S74506-1|AAB32870.1| 509|Homo sapiens inactivating mutations
associated with campomelic dysplasia and autosomal XY se
protein.
Length = 509
Score = 29.9 bits (64), Expect = 9.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -3
Query: 651 PTVSKARCRRLSTPSAQPVPPPQMLPSLQLTTPRHRKCKGESQKTHISSK 502
P +A + + P QP PPQ + LTT G+SQ+THI ++
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSE--PGQSQRTHIKTE 400
>EF064715-1|ABK41898.1| 789|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 789
Score = 29.9 bits (64), Expect = 9.6
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Frame = -3
Query: 618 STPSAQPVP--PPQMLPSLQ------LTTPRHRKCKGESQKTHISSKSKYDWRVPRLCHT 463
S P P+P PP +PS L P C G S + ++ + + PRLC
Sbjct: 352 SYPGYAPLPHLPPAFIPSYNAHYPKFLLPPYGMNCNGLSAVSSMNGINNFGL-FPRLCPV 410
Query: 462 YSNLSPAASPRH 427
YSNL S H
Sbjct: 411 YSNLLGGGSLPH 422
>BX538130-1|CAD98031.1| 986|Homo sapiens hypothetical protein
protein.
Length = 986
Score = 29.9 bits (64), Expect = 9.6
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 627 RRLSTPSAQPVPPPQMLPSLQLTTPRHRKCKGESQKTH 514
RR ++ + PP+M P L P+H C G SQ H
Sbjct: 459 RRTTSSAVTETGPPEM-PRLPSCCPQHSPCGGSSQNHH 495
>BT006875-1|AAP35521.1| 509|Homo sapiens SRY (sex determining
region Y)-box 9 (campomelic dysplasia, autosomal
sex-rever protein.
Length = 509
Score = 29.9 bits (64), Expect = 9.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -3
Query: 651 PTVSKARCRRLSTPSAQPVPPPQMLPSLQLTTPRHRKCKGESQKTHISSK 502
P +A + + P QP PPQ + LTT G+SQ+THI ++
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSE--PGQSQRTHIKTE 400
>BC103835-1|AAI03836.1| 691|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 691
Score = 29.9 bits (64), Expect = 9.6
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Frame = -3
Query: 618 STPSAQPVP--PPQMLPSLQ------LTTPRHRKCKGESQKTHISSKSKYDWRVPRLCHT 463
S P P+P PP +PS L P C G S + ++ + + PRLC
Sbjct: 254 SYPGYAPLPHLPPAFIPSYNAHYPKFLLPPYGMNCNGLSAVSSMNGINNFGL-FPRLCPV 312
Query: 462 YSNLSPAASPRH 427
YSNL S H
Sbjct: 313 YSNLLGGGSLPH 324
>BC103834-1|AAI03835.1| 691|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 691
Score = 29.9 bits (64), Expect = 9.6
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Frame = -3
Query: 618 STPSAQPVP--PPQMLPSLQ------LTTPRHRKCKGESQKTHISSKSKYDWRVPRLCHT 463
S P P+P PP +PS L P C G S + ++ + + PRLC
Sbjct: 254 SYPGYAPLPHLPPAFIPSYNAHYPKFLLPPYGMNCNGLSAVSSMNGINNFGL-FPRLCPV 312
Query: 462 YSNLSPAASPRH 427
YSNL S H
Sbjct: 313 YSNLLGGGSLPH 324
>BC103833-1|AAI03834.1| 691|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 691
Score = 29.9 bits (64), Expect = 9.6
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Frame = -3
Query: 618 STPSAQPVP--PPQMLPSLQ------LTTPRHRKCKGESQKTHISSKSKYDWRVPRLCHT 463
S P P+P PP +PS L P C G S + ++ + + PRLC
Sbjct: 254 SYPGYAPLPHLPPAFIPSYNAHYPKFLLPPYGMNCNGLSAVSSMNGINNFGL-FPRLCPV 312
Query: 462 YSNLSPAASPRH 427
YSNL S H
Sbjct: 313 YSNLLGGGSLPH 324
>BC103832-1|AAI03833.1| 691|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 691
Score = 29.9 bits (64), Expect = 9.6
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Frame = -3
Query: 618 STPSAQPVP--PPQMLPSLQ------LTTPRHRKCKGESQKTHISSKSKYDWRVPRLCHT 463
S P P+P PP +PS L P C G S + ++ + + PRLC
Sbjct: 254 SYPGYAPLPHLPPAFIPSYNAHYPKFLLPPYGMNCNGLSAVSSMNGINNFGL-FPRLCPV 312
Query: 462 YSNLSPAASPRH 427
YSNL S H
Sbjct: 313 YSNLLGGGSLPH 324
>BC056420-1|AAH56420.1| 509|Homo sapiens SRY (sex determining
region Y)-box 9 (campomelic dysplasia, autosomal
sex-rever protein.
Length = 509
Score = 29.9 bits (64), Expect = 9.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -3
Query: 651 PTVSKARCRRLSTPSAQPVPPPQMLPSLQLTTPRHRKCKGESQKTHISSK 502
P +A + + P QP PPQ + LTT G+SQ+THI ++
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSE--PGQSQRTHIKTE 400
>BC007951-1|AAH07951.1| 509|Homo sapiens SRY (sex determining
region Y)-box 9 (campomelic dysplasia, autosomal
sex-rever protein.
Length = 509
Score = 29.9 bits (64), Expect = 9.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -3
Query: 651 PTVSKARCRRLSTPSAQPVPPPQMLPSLQLTTPRHRKCKGESQKTHISSK 502
P +A + + P QP PPQ + LTT G+SQ+THI ++
Sbjct: 353 PPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSE--PGQSQRTHIKTE 400
>AY198415-1|AAO45624.1| 691|Homo sapiens PR domain-containing
protein 1 beta protein.
Length = 691
Score = 29.9 bits (64), Expect = 9.6
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Frame = -3
Query: 618 STPSAQPVP--PPQMLPSLQ------LTTPRHRKCKGESQKTHISSKSKYDWRVPRLCHT 463
S P P+P PP +PS L P C G S + ++ + + PRLC
Sbjct: 254 SYPGYAPLPHLPPAFIPSYNAHYPKFLLPPYGMNCNGLSAVSSMNGINNFGL-FPRLCPV 312
Query: 462 YSNLSPAASPRH 427
YSNL S H
Sbjct: 313 YSNLLGGGSLPH 324
>AY198414-1|AAO45623.1| 789|Homo sapiens PR domain-containing
protein 1 alpha protein.
Length = 789
Score = 29.9 bits (64), Expect = 9.6
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Frame = -3
Query: 618 STPSAQPVP--PPQMLPSLQ------LTTPRHRKCKGESQKTHISSKSKYDWRVPRLCHT 463
S P P+P PP +PS L P C G S + ++ + + PRLC
Sbjct: 352 SYPGYAPLPHLPPAFIPSYNAHYPKFLLPPYGMNCNGLSAVSSMNGINNFGL-FPRLCPV 410
Query: 462 YSNLSPAASPRH 427
YSNL S H
Sbjct: 411 YSNLLGGGSLPH 422
>AL358952-2|CAI18902.1| 789|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 789
Score = 29.9 bits (64), Expect = 9.6
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Frame = -3
Query: 618 STPSAQPVP--PPQMLPSLQ------LTTPRHRKCKGESQKTHISSKSKYDWRVPRLCHT 463
S P P+P PP +PS L P C G S + ++ + + PRLC
Sbjct: 352 SYPGYAPLPHLPPAFIPSYNAHYPKFLLPPYGMNCNGLSAVSSMNGINNFGL-FPRLCPV 410
Query: 462 YSNLSPAASPRH 427
YSNL S H
Sbjct: 411 YSNLLGGGSLPH 422
>AL022067-3|CAI42296.1| 789|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 789
Score = 29.9 bits (64), Expect = 9.6
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Frame = -3
Query: 618 STPSAQPVP--PPQMLPSLQ------LTTPRHRKCKGESQKTHISSKSKYDWRVPRLCHT 463
S P P+P PP +PS L P C G S + ++ + + PRLC
Sbjct: 352 SYPGYAPLPHLPPAFIPSYNAHYPKFLLPPYGMNCNGLSAVSSMNGINNFGL-FPRLCPV 410
Query: 462 YSNLSPAASPRH 427
YSNL S H
Sbjct: 411 YSNLLGGGSLPH 422
>AL022067-1|CAD92522.1| 336|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 336
Score = 29.9 bits (64), Expect = 9.6
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Frame = -3
Query: 618 STPSAQPVP--PPQMLPSLQ------LTTPRHRKCKGESQKTHISSKSKYDWRVPRLCHT 463
S P P+P PP +PS L P C G S + ++ + + PRLC
Sbjct: 133 SYPGYAPLPHLPPAFIPSYNAHYPKFLLPPYGMNCNGLSAVSSMNGINNFGL-FPRLCPV 191
Query: 462 YSNLSPAASPRH 427
YSNL S H
Sbjct: 192 YSNLLGGGSLPH 203
>AF084199-1|AAC33300.1| 789|Homo sapiens beta-interferon gene
positive-regulatory domain I binding factor protein.
Length = 789
Score = 29.9 bits (64), Expect = 9.6
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Frame = -3
Query: 618 STPSAQPVP--PPQMLPSLQ------LTTPRHRKCKGESQKTHISSKSKYDWRVPRLCHT 463
S P P+P PP +PS L P C G S + ++ + + PRLC
Sbjct: 352 SYPGYAPLPHLPPAFIPSYNAHYPKFLLPPYGMNCNGLSAVSSMNGINNFGL-FPRLCPV 410
Query: 462 YSNLSPAASPRH 427
YSNL S H
Sbjct: 411 YSNLLGGGSLPH 422
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,074,425
Number of Sequences: 237096
Number of extensions: 2250886
Number of successful extensions: 12410
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 11591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12370
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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