Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12a10
(832 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain (p... 66 3e-11
Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical pr... 62 4e-10
Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical pr... 61 8e-10
U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain (pr... 61 1e-09
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 60 1e-09
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 60 1e-09
Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain (... 56 3e-08
Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical pr... 55 5e-08
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 55 5e-08
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 55 7e-08
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 55 7e-08
U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain (p... 55 7e-08
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 52 4e-07
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 52 7e-07
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 50 2e-06
AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical ... 48 6e-06
Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical p... 46 3e-05
Z73102-3|CAA97409.1| 337|Caenorhabditis elegans Hypothetical pr... 45 8e-05
U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain (pr... 45 8e-05
U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain (pr... 44 1e-04
Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical pr... 40 0.002
CU457741-21|CAM36361.1| 231|Caenorhabditis elegans Hypothetical... 40 0.003
AL132859-7|CAB60495.2| 231|Caenorhabditis elegans Hypothetical ... 40 0.003
U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 37 0.015
U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (pr... 37 0.015
U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 37 0.015
U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain (pr... 37 0.015
Z70284-16|CAE17884.1| 155|Caenorhabditis elegans Hypothetical p... 34 0.11
Z81030-4|CAB02708.1| 89|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 31 0.77
L23110-1|AAA03544.1| 744|Caenorhabditis elegans BMP receptor pr... 31 0.77
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 31 0.77
AF047651-12|AAN63460.1| 592|Caenorhabditis elegans Abnormal dau... 31 0.77
AF047651-11|AAO61443.1| 446|Caenorhabditis elegans Abnormal dau... 31 0.77
AF047651-10|AAC02726.1| 744|Caenorhabditis elegans Abnormal dau... 31 0.77
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 29 3.1
AF016654-1|AAB66028.1| 731|Caenorhabditis elegans Hypothetical ... 29 3.1
U40797-1|AAB37554.2| 250|Caenorhabditis elegans Hypothetical pr... 29 4.1
L10986-12|AAA28011.1| 197|Caenorhabditis elegans Hypothetical p... 29 4.1
AC006630-4|AAK68324.1| 311|Caenorhabditis elegans Hypothetical ... 29 4.1
Z72505-4|CAA96611.1| 347|Caenorhabditis elegans Hypothetical pr... 29 5.4
AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical ... 29 5.4
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z81542-3|CAB04415.1| 308|Caenorhabditis elegans Hypothetical pr... 28 9.4
>U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 8 protein.
Length = 813
Score = 66.1 bits (154), Expect = 3e-11
Identities = 29/60 (48%), Positives = 40/60 (66%)
Frame = -1
Query: 739 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGKPGTRAQYD 560
Y VL + R S KEIK+A+ L++E+HPDK KD A RF++I EAY +L P + +YD
Sbjct: 24 YKVLGISRRASAKEIKSAYKSLAREWHPDKRKDEAASGRFMEIAEAYEVLSDPLRKERYD 83
>Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical
protein F54D5.8 protein.
Length = 331
Score = 62.5 bits (145), Expect = 4e-10
Identities = 26/65 (40%), Positives = 42/65 (64%)
Frame = -1
Query: 742 HYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGKPGTRAQY 563
+Y VL + + +D EIK A+ +++ +YHPDKNK+A A+ +F +I EAY++L + Y
Sbjct: 5 YYKVLGISKGATDDEIKKAYRKMALKYHPDKNKEAGAENKFKEIAEAYDVLSDDKKKKIY 64
Query: 562 DSITE 548
D E
Sbjct: 65 DQFGE 69
>Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical
protein T04A8.9 protein.
Length = 249
Score = 61.3 bits (142), Expect = 8e-10
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = -1
Query: 742 HYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAK--AQERFVQIVEAYNILGKPGTRA 569
HY VL L ++ S K+IK+A+ +LSK++HPD N K A ++F Q+ AY IL R
Sbjct: 25 HYKVLGLAQSASQKDIKSAYYKLSKQHHPDTNPTNKEEAAKKFHQVAMAYEILSSEDKRK 84
Query: 568 QYDSITEVSTGP 533
YD +T + T P
Sbjct: 85 AYD-MTRIRTSP 95
>U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 4 protein.
Length = 274
Score = 60.9 bits (141), Expect = 1e-09
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 7/171 (4%)
Frame = -1
Query: 751 RRCHYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGKPGTR 572
+R HY+VL + + EIK+AF SK+ HPD + + A F+++ AY++L +P R
Sbjct: 26 QRTHYEVLGVESTATLSEIKSAFYAQSKKVHPDNSSEESATASFLELKNAYDVLRRPADR 85
Query: 571 AQYDSITEVSTG--PNS---YVYKTHVPYNLRKNAQYSYYYDFGSKAHSAKGNTNTYYS- 410
YD G PN Y Y P QY + D+ + N+ +
Sbjct: 86 RLYDYQLRGGGGRYPNGGQRYQYPNTAP-------QYDFSRDWSTYWSQNPDNSRSSREE 138
Query: 409 -NESAKKMPNYYIIFTCIGITLLGAILQGYVIRNMYVGQRKQALQKSMELA 260
++S+++ + +T IG+ L+ GY+ Y ++ L E+A
Sbjct: 139 RDKSSREFMKSIVKWTAIGLVLVAGYNGGYLYLLAYNQKQLDKLIDEDEIA 189
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/69 (37%), Positives = 41/69 (59%)
Frame = -1
Query: 763 YSFGRRCHYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGK 584
++ + +Y L + + K IK A+ QL+K+YHPD NK +AQ +F +I EAY +L
Sbjct: 38 HALSKEDYYKTLGVDKKSDAKAIKKAYFQLAKKYHPDVNKTKEAQTKFQEISEAYEVLSD 97
Query: 583 PGTRAQYDS 557
R +YD+
Sbjct: 98 DTKRQEYDA 106
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/69 (37%), Positives = 41/69 (59%)
Frame = -1
Query: 763 YSFGRRCHYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGK 584
++ + +Y L + + K IK A+ QL+K+YHPD NK +AQ +F +I EAY +L
Sbjct: 38 HALSKEDYYKTLGVDKKSDAKAIKKAYFQLAKKYHPDVNKTKEAQTKFQEISEAYEVLSD 97
Query: 583 PGTRAQYDS 557
R +YD+
Sbjct: 98 DTKRQEYDA 106
>Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical
protein R74.4 protein.
Length = 378
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = -1
Query: 739 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDKN-KDAKAQERFVQIVEAYNILGKPGTRAQY 563
Y +L + + S+ EIK+A+ +L+ +YHPD+N DA AQE F ++ AY++L P R QY
Sbjct: 19 YQLLGVEKMASEAEIKSAYRKLALKYHPDRNPNDAHAQEEFKKVSIAYSVLSDPNKRRQY 78
Query: 562 D 560
D
Sbjct: 79 D 79
>AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 19 protein.
Length = 439
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/61 (42%), Positives = 38/61 (62%)
Frame = -1
Query: 739 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGKPGTRAQYD 560
Y LN+R + S +IK ++ +L+KEYHPDKN D ++F +I AY +L P R YD
Sbjct: 15 YTTLNVRPDASQADIKKSYFKLAKEYHPDKNPD--HGDKFKEISFAYEVLSSPEKRRLYD 72
Query: 559 S 557
+
Sbjct: 73 A 73
>Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical
protein T15H9.7 protein.
Length = 249
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = -1
Query: 781 NGFIRFYSFGRRCHYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAK-AQERFVQIVE 605
+ + F GR Y +L + +N + +IK A+ +L+KE HPD+N+D + A E+F +
Sbjct: 13 SSLVAFVECGRD-FYKILGVAKNANANQIKKAYRKLAKELHPDRNQDDEMANEKFQDLSS 71
Query: 604 AYNILGKPGTRAQYD 560
AY +L RA YD
Sbjct: 72 AYEVLSDKEKRAMYD 86
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Frame = -1
Query: 739 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAK--AQERFVQIVEAYNILGKPGTRAQ 566
Y +L+L + C+DKEI+ A+ ++HPDKN D K A+ RF++ EA++ L R +
Sbjct: 10 YKILHLEKGCTDKEIQKAYRAQCLKWHPDKNLDNKEEAERRFIEAKEAFDFLYDKEKREE 69
Query: 565 YDSITE 548
YD+ E
Sbjct: 70 YDNREE 75
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 54.8 bits (126), Expect = 7e-08
Identities = 25/61 (40%), Positives = 39/61 (63%)
Frame = -1
Query: 742 HYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGKPGTRAQY 563
+YDVL ++ + SD E+K A+ +++ ++HPDKN D E+F QI +AY +L R Y
Sbjct: 7 YYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD--GAEQFKQISQAYEVLSDEKKRQIY 64
Query: 562 D 560
D
Sbjct: 65 D 65
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 54.8 bits (126), Expect = 7e-08
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Frame = -1
Query: 748 RCHYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKD--AKAQERFVQIVEAYNILGKPGT 575
+CHY+VL + R+ D +IK + +L+ ++HPDKN D + ++F + AY++L P
Sbjct: 27 KCHYEVLEVERDADDDKIKKNYRKLALKWHPDKNPDRIEECTQQFRLLQAAYDVLSDPRE 86
Query: 574 RAQYDSITE-VSTGPNS 527
R YD E + G N+
Sbjct: 87 REFYDRHRESILKGKNT 103
>U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 14 protein.
Length = 215
Score = 54.8 bits (126), Expect = 7e-08
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = -1
Query: 739 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQ--ERFVQIVEAYNILGKPGTRAQ 566
Y+VL +++N +D EIK A+ +L+ YHPDKN D + E F +I A +L P R
Sbjct: 40 YNVLGIQKNATDDEIKKAYRKLALRYHPDKNLDGDPEKTEMFKEINYANAVLSNPNKRRV 99
Query: 565 YDSITE 548
YD + E
Sbjct: 100 YDEMGE 105
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = -1
Query: 742 HYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKN-KDAKAQERFVQIVEAYNILGKPGTRAQ 566
+Y++L + R+ D+ I+ AF +L+ + HPD+N D A + FV+I +AY +L R +
Sbjct: 21 YYELLGVERDADDRTIRKAFKKLAIKKHPDRNTDDPNAHDEFVKINKAYEVLKDENLRKK 80
Query: 565 YDSITE 548
YD E
Sbjct: 81 YDQFGE 86
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 51.6 bits (118), Expect = 7e-07
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Frame = -1
Query: 754 GRRCHYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKD----AKAQERFVQIVEAYNILG 587
G+R +Y +L ++RN S +EI A+ +L++++HPD D KA+++F+ I A +L
Sbjct: 376 GKRDYYKILGVKRNASKREITKAYRKLAQKWHPDNFSDEEEKKKAEKKFIDIAAAKEVLQ 435
Query: 586 KPGTRAQYD 560
R Q+D
Sbjct: 436 DEEKRRQFD 444
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Frame = -1
Query: 754 GRRCHYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKD----AKAQERFVQIVEAYNILG 587
G+R +Y +L +RRN + +EI A+ ++++++HPD +D KA+++F+ I A +L
Sbjct: 377 GKRDYYKILGVRRNANKREITKAYRKMAQKWHPDNFQDEKEKKKAEKKFIDIAAAKEVLS 436
Query: 586 KPGTRAQYDS 557
R +D+
Sbjct: 437 NEEKRRAFDN 446
>AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical
protein Y39C12A.8 protein.
Length = 365
Score = 48.4 bits (110), Expect = 6e-06
Identities = 32/111 (28%), Positives = 50/111 (45%)
Frame = -1
Query: 739 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGKPGTRAQYD 560
Y +LN+ + S EI+ AF + +E HPDK K A E + A+++L P R QYD
Sbjct: 29 YKILNVDKKASPDEIRIAFRKRIREVHPDKCKHPSATEASKVVNNAFSLLMDPAKRRQYD 88
Query: 559 SITEVSTGPNSYVYKTHVPYNLRKNAQYSYYYDFGSKAHSAKGNTNTYYSN 407
++ N Y + + N RK + K+ + G N S+
Sbjct: 89 LQNAETSNENLY-KRCNRNKNQRKQEYSNTQRQNHKKSEPSNGKRNEQNSS 138
>Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical
protein B0035.14 protein.
Length = 401
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -1
Query: 751 RRC--HYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGKPG 578
R C +Y++L + + SD +I+ + +L+ + HPDK + A E F + AY +L
Sbjct: 133 RHCKDYYEILKIDKKASDDDIRKEYRKLALKLHPDKCRAPHATEAFKALGNAYAVLSDTD 192
Query: 577 TRAQYD 560
R QYD
Sbjct: 193 KRRQYD 198
>Z73102-3|CAA97409.1| 337|Caenorhabditis elegans Hypothetical
protein B0035.2 protein.
Length = 337
Score = 44.8 bits (101), Expect = 8e-05
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Frame = -1
Query: 739 YDVLNLRRNCSDKE-IKNAFIQLSKEYHPD--KNKDAK--AQERFVQIVEAYNILGKPGT 575
YDVL + R DK+ + A+ L++++HPD KNK+ K A+ERF I AY L
Sbjct: 38 YDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEA 97
Query: 574 RAQYDSITEVSTGPNSYVYKTHVPYNLR 491
+ YD + P+ Y + Y LR
Sbjct: 98 KTNYDYYLD---HPDQRFYNYYQYYRLR 122
>U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 24 protein.
Length = 249
Score = 44.8 bits (101), Expect = 8e-05
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = -1
Query: 739 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAK----AQERFVQIVEAYNILGKPGTR 572
Y L + D EIK A+ +L+ ++HPDK+ D K A+++F +I +AY IL R
Sbjct: 9 YITLGISSTSDDVEIKKAYRKLALKWHPDKHTDDKSKEEAEQKFKKIAQAYEILTDKKKR 68
Query: 571 AQYD 560
A D
Sbjct: 69 ADLD 72
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = -1
Query: 805 RNSDFKSLNGFIRFYSFGRRCHYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQE 626
R++DF + N + RF S YD + DK + I+ S P KN +
Sbjct: 139 RSADFTTKNHYHRFPSSRVHIFYDENKNTKERDDKNTFSTVIRFSSPTEPGKNATVRKTS 198
Query: 625 RFVQIVEAYNILGK 584
++V+ I+ K
Sbjct: 199 TSTKLVDGKKIVTK 212
>U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 9 protein.
Length = 591
Score = 44.4 bits (100), Expect = 1e-04
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Frame = -1
Query: 739 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDK---NKDAKAQER-FVQIVEAYNILGKPGTR 572
Y +LN+ ++ +D EI A+ + +HPD+ N + K ER FV++ A+ +L P R
Sbjct: 28 YAILNVPKDATDDEIIKAYRKRCLMFHPDRFVDNDEKKDAERVFVKLRRAHEVLLDPKQR 87
Query: 571 AQYDS--ITEVSTGPNSYVYKTHVPYNLRKNAQY 476
A YD+ + + T V ++ P N+RK ++
Sbjct: 88 AIYDALGVQGLDTQGWELVSRSANPENIRKEYEF 121
>Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical
protein T24H10.3 protein.
Length = 242
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = -1
Query: 757 FGRRCHYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKN----KDAKA-QERFVQIVEAYNI 593
F C Y++L ++++C +K +K + + S +HPDK+ +D + +F + +AY I
Sbjct: 10 FNTDCLYELLGVKKDCDEKALKKGYYRQSMRWHPDKSNLVEEDMQTYTTKFQLLNKAYQI 69
Query: 592 LGKPGTRAQYDSITEV 545
L R YD V
Sbjct: 70 LSDEEKRKIYDETGSV 85
>Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical
protein C01G10.12 protein.
Length = 191
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/77 (27%), Positives = 46/77 (59%), Gaps = 13/77 (16%)
Frame = -1
Query: 751 RRCHYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKN-KDAKAQ------------ERFVQI 611
R+ +Y+++ + + + +EI++AF++ +K+ HPD++ K +K+ E+F+ +
Sbjct: 16 RKNYYEIIGVSASATRQEIRDAFLKKTKQLHPDQSRKSSKSDSRVGWATGSSETEQFMLV 75
Query: 610 VEAYNILGKPGTRAQYD 560
EAY++L R +YD
Sbjct: 76 KEAYDVLRNEEKRKEYD 92
>CU457741-21|CAM36361.1| 231|Caenorhabditis elegans Hypothetical
protein Y39C12A.9 protein.
Length = 231
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = -1
Query: 760 SFGRRCHYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGKP 581
SF + HY VL +R+N + EI NA++ + P+ D ++ + AY+ L P
Sbjct: 3 SFENQNHYQVLKVRKNATHFEIYNAYMNSMAKVDPN---DPYVFKKDLAFGLAYSTLSDP 59
Query: 580 GTRAQYD 560
G R +YD
Sbjct: 60 GLREEYD 66
>AL132859-7|CAB60495.2| 231|Caenorhabditis elegans Hypothetical
protein Y39C12A.9 protein.
Length = 231
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = -1
Query: 760 SFGRRCHYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGKP 581
SF + HY VL +R+N + EI NA++ + P+ D ++ + AY+ L P
Sbjct: 3 SFENQNHYQVLKVRKNATHFEIYNAYMNSMAKVDPN---DPYVFKKDLAFGLAYSTLSDP 59
Query: 580 GTRAQYD 560
G R +YD
Sbjct: 60 GLREEYD 66
>U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform b
protein.
Length = 849
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = -1
Query: 739 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGKPGTRAQY 563
Y V LR +CSD +IK + +L+ PDK A + + + A++ +G +R++Y
Sbjct: 662 YSVFGLRSDCSDDDIKRNYKRLAALVSPDKCTIDAADQVYELVDVAFSAIGYKDSRSEY 720
>U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform d
protein.
Length = 868
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = -1
Query: 739 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGKPGTRAQY 563
Y V LR +CSD +IK + +L+ PDK A + + + A++ +G +R++Y
Sbjct: 662 YSVFGLRSDCSDDDIKRNYKRLAALVSPDKCTIDAADQVYELVDVAFSAIGYKDSRSEY 720
>U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform a
protein.
Length = 915
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = -1
Query: 739 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGKPGTRAQY 563
Y V LR +CSD +IK + +L+ PDK A + + + A++ +G +R++Y
Sbjct: 662 YSVFGLRSDCSDDDIKRNYKRLAALVSPDKCTIDAADQVYELVDVAFSAIGYKDSRSEY 720
>U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform c
protein.
Length = 912
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = -1
Query: 739 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGKPGTRAQY 563
Y V LR +CSD +IK + +L+ PDK A + + + A++ +G +R++Y
Sbjct: 661 YSVFGLRSDCSDDDIKRNYKRLAALVSPDKCTIDAADQVYELVDVAFSAIGYKDSRSEY 719
>Z70284-16|CAE17884.1| 155|Caenorhabditis elegans Hypothetical
protein K07F5.16 protein.
Length = 155
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -1
Query: 739 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKD--AKAQERFVQIVEAYNILGKPGTRAQ 566
Y +L + S +I + ++ HPDK K+ + E+F+++ AY+IL R
Sbjct: 17 YRLLGCDESSSIDQITAEYRARVRDCHPDKVKEHNTNSTEKFMELQNAYSILTSDSRRKT 76
Query: 565 YDS 557
YDS
Sbjct: 77 YDS 79
>Z81030-4|CAB02708.1| 89|Caenorhabditis elegans Hypothetical
protein C01G10.6 protein.
Length = 89
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -1
Query: 541 TGPNSYVYKTHVPYNLRKNAQYSYYYDFGSKAHSAKGNTNTYYSN 407
T N Y + P N N Q +YYYD G+ ++ G T YY N
Sbjct: 28 TNNNGYQTYYYYPNNNNNNGQNTYYYDNGNNGNT--GTTYYYYPN 70
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein
F18C12.2b protein.
Length = 2271
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -1
Query: 697 IKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNIL 590
I+ + +L+ +YHPDKN + + E F +I AY +L
Sbjct: 1341 IRRQYYKLAAKYHPDKNPEGR--EMFERINAAYELL 1374
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein
F18C12.2a protein.
Length = 2279
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -1
Query: 697 IKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNIL 590
I+ + +L+ +YHPDKN + + E F +I AY +L
Sbjct: 1341 IRRQYYKLAAKYHPDKNPEGR--EMFERINAAYELL 1374
>L23110-1|AAA03544.1| 744|Caenorhabditis elegans BMP receptor
protein.
Length = 744
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -1
Query: 406 ESAKKMPNYYIIFTCIGITLLGAILQGYVIRNMYVGQRKQALQKSMELADELDKVRAAAT 227
ES K P Y+II + + L A+L + + +K+ ++K ++ +++K A
Sbjct: 223 ESLDKFPFYWIIIIALSVILCIALLILAYVGWKFQQNKKEEIKKQQKIKFDMEKTDALEA 282
Query: 226 GN 221
GN
Sbjct: 283 GN 284
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -1
Query: 697 IKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNIL 590
I+ + +L+ +YHPDKN + + E F +I AY +L
Sbjct: 1341 IRRQYYKLAAKYHPDKNPEGR--EMFERINAAYELL 1374
>AF047651-12|AAN63460.1| 592|Caenorhabditis elegans Abnormal dauer
formation protein4, isoform c protein.
Length = 592
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -1
Query: 406 ESAKKMPNYYIIFTCIGITLLGAILQGYVIRNMYVGQRKQALQKSMELADELDKVRAAAT 227
ES K P Y+II + + L A+L + + +K+ ++K ++ +++K A
Sbjct: 71 ESLDKFPFYWIIIIALSVILCIALLILAYVGWKFQQNKKEEIKKQQKIKFDMEKTDALEA 130
Query: 226 GN 221
GN
Sbjct: 131 GN 132
>AF047651-11|AAO61443.1| 446|Caenorhabditis elegans Abnormal dauer
formation protein4, isoform d protein.
Length = 446
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -1
Query: 406 ESAKKMPNYYIIFTCIGITLLGAILQGYVIRNMYVGQRKQALQKSMELADELDKVRAAAT 227
ES K P Y+II + + L A+L + + +K+ ++K ++ +++K A
Sbjct: 223 ESLDKFPFYWIIIIALSVILCIALLILAYVGWKFQQNKKEEIKKQQKIKFDMEKTDALEA 282
Query: 226 GN 221
GN
Sbjct: 283 GN 284
>AF047651-10|AAC02726.1| 744|Caenorhabditis elegans Abnormal dauer
formation protein4, isoform a protein.
Length = 744
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -1
Query: 406 ESAKKMPNYYIIFTCIGITLLGAILQGYVIRNMYVGQRKQALQKSMELADELDKVRAAAT 227
ES K P Y+II + + L A+L + + +K+ ++K ++ +++K A
Sbjct: 223 ESLDKFPFYWIIIIALSVILCIALLILAYVGWKFQQNKKEEIKKQQKIKFDMEKTDALEA 282
Query: 226 GN 221
GN
Sbjct: 283 GN 284
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +2
Query: 359 DTCENYIIIGHFLGTLITIICVCISFRTMC-----FGSEIIVVTVLCIFT*II-RHMS 514
D C Y++ G F+ T C C+SF +C FG I+ V+ T II H+S
Sbjct: 267 DNCPTYVLAGIFMYT-----CHCVSFSILCTSILPFGKRIVEGMVIIWITLIIAMHLS 319
>AF016654-1|AAB66028.1| 731|Caenorhabditis elegans Hypothetical
protein C17A2.5 protein.
Length = 731
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = -2
Query: 657 QTRIKMQKHKRDLSRLLKRIIFLANQAPELNMTA*LKFQLDPILTFIKLMCLIIYVKMHS 478
Q RIK +K D ++ R I + + PE++ T F DPI +K L +
Sbjct: 554 QERIKAEKP--DYLFIISRYISIGDAIPEIHTTTNFIFDKDPIYQTMKKQLLGLVASTKF 611
Query: 477 TVTTMISDPKH 445
V + + P+H
Sbjct: 612 KVYILDAVPRH 622
>U40797-1|AAB37554.2| 250|Caenorhabditis elegans Hypothetical
protein C28C12.11 protein.
Length = 250
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 653 VWMIFFT*LNECIFDFFVGTIST 721
V++IF+T L C FD FVG + T
Sbjct: 104 VFLIFYTVLEICEFDVFVGQVQT 126
>L10986-12|AAA28011.1| 197|Caenorhabditis elegans Hypothetical
protein F10E9.1 protein.
Length = 197
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 376 YNNWAFSWHSHYYNMCLYFLSHYVLWIRNHSSNCTVHFYVDYKAHEFYKR 525
YN+ + W +YYN L FL+ L+ R + + D E KR
Sbjct: 136 YNDISIIWFVYYYNFMLVFLAIQRLFCRKAVEEKKMKIFADTLREEQQKR 185
>AC006630-4|AAK68324.1| 311|Caenorhabditis elegans Hypothetical
protein F14H12.2 protein.
Length = 311
Score = 29.1 bits (62), Expect = 4.1
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1
Query: 439 HYVLWIRNHSSNC 477
HYV WIR H++NC
Sbjct: 238 HYVSWIRKHTTNC 250
>Z72505-4|CAA96611.1| 347|Caenorhabditis elegans Hypothetical
protein C50C10.6 protein.
Length = 347
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -1
Query: 817 VFIKRNSDFKSLNGFIRFYSFGRRCHYDVLNLRRNCSDKEIKNAFIQLSKEYH 659
+ +KR+ D L ++ Y+ Y +NL CS + +AFI K+ H
Sbjct: 31 LILKRSPDALGLYKWLMMYTSIFELTYSFVNLFAGCSVRTFGSAFIVFRKDQH 83
>AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical
protein Y51A2D.8 protein.
Length = 386
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = -1
Query: 730 LNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGKPGTRAQ 566
+N+ R+ +K K AF K+Y+ +++ Q+RF V++YN + K +++
Sbjct: 29 INIDRDHPEKLYK-AFEDFKKKYNRKYKDESENQQRFNNFVKSYNNVDKLNAKSK 82
>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical protein
C25F9.2 protein.
Length = 1469
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/60 (21%), Positives = 26/60 (43%)
Frame = -1
Query: 541 TGPNSYVYKTHVPYNLRKNAQYSYYYDFGSKAHSAKGNTNTYYSNESAKKMPNYYIIFTC 362
TG NS + ++ + +KN Y H + N TY+++ +K + ++ C
Sbjct: 910 TGSNSRIGLKYLQWIEKKNPSLHLKYQLRGGEHKIEANGRTYFADGFNEKTNEVFEVYGC 969
>Z81542-3|CAB04415.1| 308|Caenorhabditis elegans Hypothetical
protein F49A5.4 protein.
Length = 308
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 373 LYNNWAFSWHSHYYNMCLYFLSHYVLWIRNHSSNCT 480
+YNN+A W S+ +C YF+++ + S++CT
Sbjct: 137 VYNNFADGWPSNEDKICNYFMTNGTQAGKWASASCT 172
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,378,497
Number of Sequences: 27780
Number of extensions: 435859
Number of successful extensions: 1394
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1384
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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