Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12a07
(780 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 93 3e-21
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 92 5e-21
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 71 2e-14
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 66 3e-13
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 61 1e-11
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 54 1e-09
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 54 1e-09
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 24 1.4
U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein. 21 9.7
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 9.7
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 92.7 bits (220), Expect = 3e-21
Identities = 53/168 (31%), Positives = 92/168 (54%), Gaps = 4/168 (2%)
Frame = -1
Query: 717 LIRFLQAIETTHRVYIVMEYAENGSLLDIIRKDQHIDETRGRRWFKQLVEAVDYCHERGV 538
+++ + + +Y++ME G L ++R H D+ R + +VEA DY H R +
Sbjct: 428 VVKLFKTFKDRKYLYMLMEACLGGELWTVLRDKGHFDDGTTRFYTACVVEAFDYLHSRNI 487
Query: 537 VHRDIKCENLLMDHGLNIKLSDFGFARGHMKPKNGVFALSETFCGSYAYASPEILKGVPY 358
++RD+K ENLL+D +KL DFGFA+ + +G + TFCG+ Y +PE++ +
Sbjct: 488 IYRDLKPENLLLDSQGYVKLVDFGFAK---RLDHG--RKTWTFCGTPEYVAPEVILNKGH 542
Query: 357 RPQDSDVWSMGVVLYAIVYGRLPFDD----TNYTQLLKQVQNKVSFPR 226
+D WS+GV+++ ++ G PF Y +LK + + + FPR
Sbjct: 543 -DISADYWSLGVLMFELLTGTPPFTGGDPMKTYNIILKGI-DAIEFPR 588
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 92.3 bits (219), Expect = 5e-21
Identities = 58/161 (36%), Positives = 86/161 (53%), Gaps = 8/161 (4%)
Frame = -1
Query: 582 KQLVEAVDYCHERGVVHRDIKCENLLM---DHGLNIKLSDFGFARGHMKPKNGVFALSET 412
+Q++E+V +CH GVVHRD+K ENLL+ G +KL+DFG A F
Sbjct: 16 QQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFG---- 71
Query: 411 FCGSYAYASPEILKGVPYRPQDSDVWSMGVVLYAIVYGRLPFDDTNYTQLLKQVQN---K 241
F G+ Y SPE+LK PY + D+W+ GV+LY ++ G PF D + +L Q++
Sbjct: 72 FAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKTGSYD 130
Query: 240 VSFPREPKVSAECRKLITRILA--PLKMRVKIPQILADPWL 124
P V+ E + LI ++L P K R+ + L PW+
Sbjct: 131 YPSPEWDTVTPEAKNLINQMLTVNPSK-RITASEALKHPWI 170
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 70.5 bits (165), Expect = 2e-14
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 3/178 (1%)
Frame = -1
Query: 753 EIEVVKGLKHENLIRFLQAIET-THRVYIVMEYAENGSLLDIIR-KDQHIDETRGRRWFK 580
E ++ +H N+I FLQ + T ++ V I+ E+ ENGSL +R D + +
Sbjct: 684 EASIMGQFEHPNVI-FLQGVVTKSNPVMIITEFMENGSLDTFLRANDGKFQVLQLVGMLR 742
Query: 579 QLVEAVDYCHERGVVHRDIKCENLLMDHGLNIKLSDFGFARGHMKPKNGVFALSETFCGS 400
+ + Y E VHRD+ N+L++ L K++DFG +R G +
Sbjct: 743 GIASGMQYLAEMNYVHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYTTRGGKI-P 801
Query: 399 YAYASPEILKGVPYRPQDSDVWSMGVVLYAIV-YGRLPFDDTNYTQLLKQVQNKVSFP 229
+ +PE + + SDVWSMG+V + ++ YG P+ + + ++K ++ P
Sbjct: 802 VRWTAPEAIAFRKF-TSASDVWSMGIVCWEVMSYGERPYWNWSNQDVIKSIEKGYRLP 858
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 66.1 bits (154), Expect = 3e-13
Identities = 42/149 (28%), Positives = 74/149 (49%)
Frame = -1
Query: 732 LKHENLIRFLQAIETTHRVYIVMEYAENGSLLDIIRKDQHIDETRGRRWFKQLVEAVDYC 553
LKH N+++ L + I ME G+ L + + + K + A+ +C
Sbjct: 114 LKHSNIVKVLMIEQGASLSLITMELC--GTTLQNRLDEAILIKNERICILKSITCALQFC 171
Query: 552 HERGVVHRDIKCENLLMDHGLNIKLSDFGFARGHMKPKNGVFALSETFCGSYAYASPEIL 373
H G+VH D+K +N+LM KL+DFG + P + F G+ Y +PE++
Sbjct: 172 HNAGIVHADVKPKNILMSKNGQPKLTDFGSSVLIGAPNE-----IDKFYGTPGYTAPEVI 226
Query: 372 KGVPYRPQDSDVWSMGVVLYAIVYGRLPF 286
K P +D++S+G+V + +++ +LPF
Sbjct: 227 KQNRPTPA-ADIYSLGIVAWQMLFRKLPF 254
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 61.3 bits (142), Expect = 1e-11
Identities = 31/106 (29%), Positives = 57/106 (53%)
Frame = -1
Query: 717 LIRFLQAIETTHRVYIVMEYAENGSLLDIIRKDQHIDETRGRRWFKQLVEAVDYCHERGV 538
L++ +T R+Y VMEY G L+ I++ E + ++ + + H RG+
Sbjct: 47 LVQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQCGKFKEPVAVFYASEIAIGLFFLHGRGI 106
Query: 537 VHRDIKCENLLMDHGLNIKLSDFGFARGHMKPKNGVFALSETFCGS 400
V+RD+K +N+L+D +IK++DFG + + ++TFCG+
Sbjct: 107 VYRDLKLDNVLLDQDGHIKIADFGMCKEGISGDK----TTKTFCGT 148
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 54.0 bits (124), Expect = 1e-09
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Frame = -1
Query: 636 DIIRKDQHIDETRGRRWFKQL------VEAVDYCHERGVVHRDIKCENLLMDHGLNIKLS 475
D + +D + G W +++ +E + Y H +G+VHRD+K +N+L+D KL+
Sbjct: 680 DRLSRDLYCGIRAGLSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLT 739
Query: 474 DFGFARGHMKPKNGVFALSETFCGSYAYASPEILKGVPYRPQDSDVWSMGVVLYAIVYG- 298
DFGF + + + G+ + +PE+L G + DV++ G++ + + G
Sbjct: 740 DFGFCITEV-------MMLGSIVGTPVHMAPELLSG--HYDSSVDVYAFGILFWYLCAGH 790
Query: 297 -RLPF 286
RLP+
Sbjct: 791 VRLPY 795
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 54.0 bits (124), Expect = 1e-09
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Frame = -1
Query: 636 DIIRKDQHIDETRGRRWFKQL------VEAVDYCHERGVVHRDIKCENLLMDHGLNIKLS 475
D + +D + G W +++ +E + Y H +G+VHRD+K +N+L+D KL+
Sbjct: 718 DRLSRDLYCGIRAGLSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLT 777
Query: 474 DFGFARGHMKPKNGVFALSETFCGSYAYASPEILKGVPYRPQDSDVWSMGVVLYAIVYG- 298
DFGF + + + G+ + +PE+L G + DV++ G++ + + G
Sbjct: 778 DFGFCITEV-------MMLGSIVGTPVHMAPELLSG--HYDSSVDVYAFGILFWYLCAGH 828
Query: 297 -RLPF 286
RLP+
Sbjct: 829 VRLPY 833
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 24.2 bits (50), Expect = 1.4
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -1
Query: 645 SLLDIIRKDQHIDETRGRRWFKQLVEAVDYCHERGVVHRDIKCENLLMD-HGLNIKLSDF 469
SL +I D +D + + K+ ++ +E + D+ +MD H ++KLSDF
Sbjct: 1358 SLSEIDNLDVSLDVSNPKNAGKKKIDVRAKLNEY-LDKADVIVNTPIMDAHFKDVKLSDF 1416
Query: 468 GFA 460
GF+
Sbjct: 1417 GFS 1419
Score = 21.4 bits (43), Expect = 9.7
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 444 PKNGVFALSETFCGSYAYAS 385
PKN +F E F SYA S
Sbjct: 1612 PKNCLFRKPEHFVASYALIS 1631
>U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein.
Length = 53
Score = 21.4 bits (43), Expect = 9.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 432 VFALSETFCGSYAY 391
+FAL T C ++AY
Sbjct: 7 IFALLATICAAFAY 20
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.4 bits (43), Expect = 9.7
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -3
Query: 634 HYTKRSAHR*DPW 596
HY K S H+ PW
Sbjct: 323 HYRKPSTHKMAPW 335
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,724
Number of Sequences: 438
Number of extensions: 5363
Number of successful extensions: 36
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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