Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte12a05
         (856 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X74104-1|CAA52207.1|  183|Homo sapiens translocon-associated pro...    72   3e-12
D37991-1|BAA07206.1|  183|Homo sapiens beta-signal sequence rece...    72   3e-12
CR456973-1|CAG33254.1|  183|Homo sapiens SSR2 protein.                 72   3e-12
BC000341-1|AAH00341.2|  183|Homo sapiens signal sequence recepto...    72   3e-12
AL355388-11|CAH72631.1|  202|Homo sapiens signal sequence recept...    72   3e-12
AK222600-1|BAD96320.1|  183|Homo sapiens signal sequence recepto...    72   3e-12

>X74104-1|CAA52207.1|  183|Homo sapiens translocon-associated
           protein protein.
          Length = 183

 Score = 71.7 bits (168), Expect = 3e-12
 Identities = 29/45 (64%), Positives = 37/45 (82%)
 Frame = -2

Query: 483 SSAPGEGAIVAFKDYDRKFSSHILDWAAFAVMTLPSLAIPFGLWY 349
           +SAPG+G I+A +++DR+FS H LDWAAF VMTLPS+ IP  LWY
Sbjct: 125 TSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWY 169


>D37991-1|BAA07206.1|  183|Homo sapiens beta-signal sequence
           receptor protein.
          Length = 183

 Score = 71.7 bits (168), Expect = 3e-12
 Identities = 29/45 (64%), Positives = 37/45 (82%)
 Frame = -2

Query: 483 SSAPGEGAIVAFKDYDRKFSSHILDWAAFAVMTLPSLAIPFGLWY 349
           +SAPG+G I+A +++DR+FS H LDWAAF VMTLPS+ IP  LWY
Sbjct: 125 TSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWY 169


>CR456973-1|CAG33254.1|  183|Homo sapiens SSR2 protein.
          Length = 183

 Score = 71.7 bits (168), Expect = 3e-12
 Identities = 29/45 (64%), Positives = 37/45 (82%)
 Frame = -2

Query: 483 SSAPGEGAIVAFKDYDRKFSSHILDWAAFAVMTLPSLAIPFGLWY 349
           +SAPG+G I+A +++DR+FS H LDWAAF VMTLPS+ IP  LWY
Sbjct: 125 TSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWY 169


>BC000341-1|AAH00341.2|  183|Homo sapiens signal sequence receptor,
           beta (translocon-associated protein beta) protein.
          Length = 183

 Score = 71.7 bits (168), Expect = 3e-12
 Identities = 29/45 (64%), Positives = 37/45 (82%)
 Frame = -2

Query: 483 SSAPGEGAIVAFKDYDRKFSSHILDWAAFAVMTLPSLAIPFGLWY 349
           +SAPG+G I+A +++DR+FS H LDWAAF VMTLPS+ IP  LWY
Sbjct: 125 TSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWY 169


>AL355388-11|CAH72631.1|  202|Homo sapiens signal sequence receptor,
           beta (translocon-associated protein beta) protein.
          Length = 202

 Score = 71.7 bits (168), Expect = 3e-12
 Identities = 29/45 (64%), Positives = 37/45 (82%)
 Frame = -2

Query: 483 SSAPGEGAIVAFKDYDRKFSSHILDWAAFAVMTLPSLAIPFGLWY 349
           +SAPG+G I+A +++DR+FS H LDWAAF VMTLPS+ IP  LWY
Sbjct: 144 TSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWY 188


>AK222600-1|BAD96320.1|  183|Homo sapiens signal sequence receptor,
           beta precursor variant protein.
          Length = 183

 Score = 71.7 bits (168), Expect = 3e-12
 Identities = 29/45 (64%), Positives = 37/45 (82%)
 Frame = -2

Query: 483 SSAPGEGAIVAFKDYDRKFSSHILDWAAFAVMTLPSLAIPFGLWY 349
           +SAPG+G I+A +++DR+FS H LDWAAF VMTLPS+ IP  LWY
Sbjct: 125 TSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWY 169


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,627,288
Number of Sequences: 237096
Number of extensions: 2244428
Number of successful extensions: 4715
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4715
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)