Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12a02
(833 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM294843-1|CAL26829.1| 217|Drosophila melanogaster CG18553 prot... 29 5.9
AM294842-1|CAL26828.1| 217|Drosophila melanogaster CG18553 prot... 29 5.9
AM294840-1|CAL26826.1| 217|Drosophila melanogaster CG18553 prot... 29 5.9
AM294839-1|CAL26825.1| 217|Drosophila melanogaster CG18553 prot... 29 5.9
AM294838-1|CAL26824.1| 217|Drosophila melanogaster CG18553 prot... 29 5.9
AM294837-1|CAL26823.1| 217|Drosophila melanogaster CG18553 prot... 29 5.9
AM294836-1|CAL26822.1| 217|Drosophila melanogaster CG18553 prot... 29 5.9
AM294835-1|CAL26821.1| 217|Drosophila melanogaster CG18553 prot... 29 5.9
BT022556-1|AAY54972.1| 438|Drosophila melanogaster IP11886p pro... 29 7.8
AE014297-579|AAF54047.1| 438|Drosophila melanogaster CG14606-PA... 29 7.8
>AM294843-1|CAL26829.1| 217|Drosophila melanogaster CG18553
protein.
Length = 217
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 415 VMLGAVAVFCGHVRVIVSVNN-RELR*IIYICPYSFVHRSFFVL 543
++L +A CG++ VI+SV R+LR Y P S H S FVL
Sbjct: 160 MLLIIIAAICGNLLVIISVMRVRKLRTFFY-SPASSCHCSSFVL 202
>AM294842-1|CAL26828.1| 217|Drosophila melanogaster CG18553
protein.
Length = 217
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 415 VMLGAVAVFCGHVRVIVSVNN-RELR*IIYICPYSFVHRSFFVL 543
++L +A CG++ VI+SV R+LR Y P S H S FVL
Sbjct: 160 MLLIIIAAICGNLLVIISVMRVRKLRTFFY-SPASSCHCSSFVL 202
>AM294840-1|CAL26826.1| 217|Drosophila melanogaster CG18553
protein.
Length = 217
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 415 VMLGAVAVFCGHVRVIVSVNN-RELR*IIYICPYSFVHRSFFVL 543
++L +A CG++ VI+SV R+LR Y P S H S FVL
Sbjct: 160 MLLIIIAAICGNLLVIISVMRVRKLRTFFY-SPASSCHCSSFVL 202
>AM294839-1|CAL26825.1| 217|Drosophila melanogaster CG18553
protein.
Length = 217
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 415 VMLGAVAVFCGHVRVIVSVNN-RELR*IIYICPYSFVHRSFFVL 543
++L +A CG++ VI+SV R+LR Y P S H S FVL
Sbjct: 160 MLLIIIAAICGNLLVIISVMRVRKLRTFFY-SPASSCHCSSFVL 202
>AM294838-1|CAL26824.1| 217|Drosophila melanogaster CG18553
protein.
Length = 217
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 415 VMLGAVAVFCGHVRVIVSVNN-RELR*IIYICPYSFVHRSFFVL 543
++L +A CG++ VI+SV R+LR Y P S H S FVL
Sbjct: 160 MLLIIIAAICGNLLVIISVMRVRKLRTFFY-SPASSCHCSSFVL 202
>AM294837-1|CAL26823.1| 217|Drosophila melanogaster CG18553
protein.
Length = 217
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 415 VMLGAVAVFCGHVRVIVSVNN-RELR*IIYICPYSFVHRSFFVL 543
++L +A CG++ VI+SV R+LR Y P S H S FVL
Sbjct: 160 MLLIIIAAICGNLLVIISVMRVRKLRTFFY-SPASSCHCSSFVL 202
>AM294836-1|CAL26822.1| 217|Drosophila melanogaster CG18553
protein.
Length = 217
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 415 VMLGAVAVFCGHVRVIVSVNN-RELR*IIYICPYSFVHRSFFVL 543
++L +A CG++ VI+SV R+LR Y P S H S FVL
Sbjct: 160 MLLIIIAAICGNLLVIISVMRVRKLRTFFY-SPASSCHCSSFVL 202
>AM294835-1|CAL26821.1| 217|Drosophila melanogaster CG18553
protein.
Length = 217
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 415 VMLGAVAVFCGHVRVIVSVNN-RELR*IIYICPYSFVHRSFFVL 543
++L +A CG++ VI+SV R+LR Y P S H S FVL
Sbjct: 160 MLLIIIAAICGNLLVIISVMRVRKLRTFFY-SPASSCHCSSFVL 202
>BT022556-1|AAY54972.1| 438|Drosophila melanogaster IP11886p
protein.
Length = 438
Score = 29.1 bits (62), Expect = 7.8
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 85 ILDHSCMNDLPSQSIVKYVDAGLAV-FRIV-YSPYWLIPGVVPSLPDV 222
I D+S L S +++ YV G+ V F + Y PY+L+P ++ +LP V
Sbjct: 114 IADNSVRGALSSMAMM-YVSIGMMVGFTLASYLPYYLMPCIIVALPVV 160
>AE014297-579|AAF54047.1| 438|Drosophila melanogaster CG14606-PA
protein.
Length = 438
Score = 29.1 bits (62), Expect = 7.8
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 85 ILDHSCMNDLPSQSIVKYVDAGLAV-FRIV-YSPYWLIPGVVPSLPDV 222
I D+S L S +++ YV G+ V F + Y PY+L+P ++ +LP V
Sbjct: 114 IADNSVRGALSSMAMM-YVSIGMMVGFTLASYLPYYLMPCIIVALPVV 160
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,204,880
Number of Sequences: 53049
Number of extensions: 693802
Number of successful extensions: 1685
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1685
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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