Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12a01
(766 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL033125-5|CAA21828.1| 959|Drosophila melanogaster EG:EG0007.12... 32 0.99
AE014298-603|AAF45924.1| 1911|Drosophila melanogaster CG4857-PB ... 32 0.99
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 30 4.0
BT025080-1|ABE73251.1| 597|Drosophila melanogaster IP15004p pro... 29 5.3
AE014297-465|AAN13380.1| 1573|Drosophila melanogaster CG10272-PC... 29 5.3
AE014297-464|AAN13379.1| 1848|Drosophila melanogaster CG10272-PD... 29 5.3
AE014297-463|AAN13378.1| 1848|Drosophila melanogaster CG10272-PB... 29 5.3
AE014297-462|AAF54122.2| 1848|Drosophila melanogaster CG10272-PA... 29 5.3
BT001518-1|AAN71273.1| 172|Drosophila melanogaster LP11469p pro... 29 9.2
AE014297-2545|AAF55568.1| 147|Drosophila melanogaster CG7694-PA... 29 9.2
AE014297-309|AAN13252.1| 1393|Drosophila melanogaster CG31551-PA... 29 9.2
>AL033125-5|CAA21828.1| 959|Drosophila melanogaster EG:EG0007.12
protein.
Length = 959
Score = 31.9 bits (69), Expect = 0.99
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 495 SSNISPSDTSIGFFRSKQQPRPGLEVQGGTFAGS 596
S N P+ +++ ++KQQ +P E GG+F+GS
Sbjct: 397 SVNFEPASSAMEAKQNKQQAQPSTEAAGGSFSGS 430
>AE014298-603|AAF45924.1| 1911|Drosophila melanogaster CG4857-PB
protein.
Length = 1911
Score = 31.9 bits (69), Expect = 0.99
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 495 SSNISPSDTSIGFFRSKQQPRPGLEVQGGTFAGS 596
S N P+ +++ ++KQQ +P E GG+F+GS
Sbjct: 397 SVNFEPASSAMEAKQNKQQAQPSTEAAGGSFSGS 430
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = -3
Query: 218 CYHYERKKPLSTHNACAP----PHSSCQLCASSPEC 123
CY ERK P + N C P P+S C++ + C
Sbjct: 12715 CYQEERKPPTTPDNPCQPSPCGPNSECKVLNGNAAC 12750
>BT025080-1|ABE73251.1| 597|Drosophila melanogaster IP15004p
protein.
Length = 597
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 546 QQPRPGLEVQGGTFAGSPTLTGLAHTSHSMETSRGQRTRKLVAP 677
Q+ PGL G G+ L LAH +++ + G R AP
Sbjct: 475 QERGPGLGAGGAAAGGNSNLATLAHVAYAQKAQGGARANAGTAP 518
>AE014297-465|AAN13380.1| 1573|Drosophila melanogaster CG10272-PC,
isoform C protein.
Length = 1573
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 546 QQPRPGLEVQGGTFAGSPTLTGLAHTSHSMETSRGQRTRKLVAP 677
Q+ PGL G G+ L LAH +++ + G R AP
Sbjct: 1451 QERGPGLGAGGAAAGGNSNLATLAHVAYAQKAQGGARANAGTAP 1494
>AE014297-464|AAN13379.1| 1848|Drosophila melanogaster CG10272-PD,
isoform D protein.
Length = 1848
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 546 QQPRPGLEVQGGTFAGSPTLTGLAHTSHSMETSRGQRTRKLVAP 677
Q+ PGL G G+ L LAH +++ + G R AP
Sbjct: 1451 QERGPGLGAGGAAAGGNSNLATLAHVAYAQKAQGGARANAGTAP 1494
>AE014297-463|AAN13378.1| 1848|Drosophila melanogaster CG10272-PB,
isoform B protein.
Length = 1848
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 546 QQPRPGLEVQGGTFAGSPTLTGLAHTSHSMETSRGQRTRKLVAP 677
Q+ PGL G G+ L LAH +++ + G R AP
Sbjct: 1451 QERGPGLGAGGAAAGGNSNLATLAHVAYAQKAQGGARANAGTAP 1494
>AE014297-462|AAF54122.2| 1848|Drosophila melanogaster CG10272-PA,
isoform A protein.
Length = 1848
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 546 QQPRPGLEVQGGTFAGSPTLTGLAHTSHSMETSRGQRTRKLVAP 677
Q+ PGL G G+ L LAH +++ + G R AP
Sbjct: 1451 QERGPGLGAGGAAAGGNSNLATLAHVAYAQKAQGGARANAGTAP 1494
>BT001518-1|AAN71273.1| 172|Drosophila melanogaster LP11469p
protein.
Length = 172
Score = 28.7 bits (61), Expect = 9.2
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -1
Query: 661 LVRCPRDVSIECDVCARPVKVGDPAKVPPCTSKPGLGCCLL 539
+V+ +EC VC P + G ++ PC + C LL
Sbjct: 84 IVKSDEGGDLECSVCKEPAEEGQKYRILPCKHEFHEECILL 124
>AE014297-2545|AAF55568.1| 147|Drosophila melanogaster CG7694-PA
protein.
Length = 147
Score = 28.7 bits (61), Expect = 9.2
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -1
Query: 661 LVRCPRDVSIECDVCARPVKVGDPAKVPPCTSKPGLGCCLL 539
+V+ +EC VC P + G ++ PC + C LL
Sbjct: 59 IVKSDEGGDLECSVCKEPAEEGQKYRILPCKHEFHEECILL 99
>AE014297-309|AAN13252.1| 1393|Drosophila melanogaster CG31551-PA
protein.
Length = 1393
Score = 28.7 bits (61), Expect = 9.2
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -3
Query: 317 VRGRRKPFVETSYRADPYDEVHRYHSEDEQGNLCYHYERKKPLSTHN 177
+ G+ PF +T Y +P + H H E EQG C + P S+H+
Sbjct: 1067 LEGKYCPFKKT-YAVEPQNAQHIPHEESEQGEDC---RKTPPPSSHS 1109
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,579,096
Number of Sequences: 53049
Number of extensions: 786602
Number of successful extensions: 2831
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2831
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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