Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11p16
(776 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003257-1|AAO25014.1| 751|Drosophila melanogaster LD24842p pro... 175 4e-44
AY069335-1|AAL39480.1| 269|Drosophila melanogaster LD05118p pro... 175 4e-44
AE014134-2855|AAN10990.1| 751|Drosophila melanogaster CG6549-PC... 175 4e-44
AE014134-2854|AAF53619.1| 751|Drosophila melanogaster CG6549-PA... 175 4e-44
BT016089-1|AAV36974.1| 1341|Drosophila melanogaster LD40982p pro... 30 4.1
AY118494-1|AAM49863.1| 740|Drosophila melanogaster LD05535p pro... 30 4.1
AF145682-1|AAD38657.1| 1239|Drosophila melanogaster BcDNA.LD2333... 30 4.1
AE014134-2148|AAF53157.2| 1296|Drosophila melanogaster CG7061-PB... 30 4.1
AE014134-2147|AAF53156.2| 1341|Drosophila melanogaster CG7061-PA... 30 4.1
AE013599-2751|AAF57649.3| 740|Drosophila melanogaster CG15087-P... 30 4.1
>BT003257-1|AAO25014.1| 751|Drosophila melanogaster LD24842p protein.
Length = 751
Score = 175 bits (427), Expect = 4e-44
Identities = 76/195 (38%), Positives = 132/195 (67%), Gaps = 1/195 (0%)
Frame = -2
Query: 769 KNLQQFVSRCKDIYLSMYNEKPALNECYMNIARSCIERFIYHICNVRPLSKFGRVKLQID 590
K LQ+FV+R +++++++K +C +A+ CIE F++++C +RPLS GR +L+ D
Sbjct: 556 KELQEFVNRSWSHHIALFDDKQMTKKCGHELAKRCIELFLHNVCILRPLSSCGRQRLKQD 615
Query: 589 CKYLEVALSPLVSDMTEIGDYYRQLKALHLLLEKTPQEIAKSQ-SEGASLPYSMVMMFLF 413
C+++E AL PL ++ E+G R L+A+ LL+ +T +E+ K E + +P +V++ LF
Sbjct: 616 CQHMEQALKPLCPNLAELGKPSRLLRAMSLLIVQTAEELVKQTIGEDSLVPSYIVLLLLF 675
Query: 412 SHAGHQLLAPHTCAGWNIQKLMQWLDTHRSEKERLDFVAGALQRYQNHIRQNQIASYDEV 233
HAG L +PHT A W+ ++L++WLD H +E+E+L+ ++GALQRY+++ R+ I YDEV
Sbjct: 676 GHAGADLQSPHTTANWSNERLIEWLDGHTAEREKLELISGALQRYRDNARRKNIQQYDEV 735
Query: 232 YPVLLQMLEDGRNSL 188
YP+++ E +L
Sbjct: 736 YPMMVDYFEQALKAL 750
>AY069335-1|AAL39480.1| 269|Drosophila melanogaster LD05118p
protein.
Length = 269
Score = 175 bits (427), Expect = 4e-44
Identities = 76/195 (38%), Positives = 132/195 (67%), Gaps = 1/195 (0%)
Frame = -2
Query: 769 KNLQQFVSRCKDIYLSMYNEKPALNECYMNIARSCIERFIYHICNVRPLSKFGRVKLQID 590
K LQ+FV+R +++++++K +C +A+ CIE F++++C +RPLS GR +L+ D
Sbjct: 74 KELQEFVNRSWSHHIALFDDKQMTKKCGHELAKRCIELFLHNVCILRPLSSCGRQRLKQD 133
Query: 589 CKYLEVALSPLVSDMTEIGDYYRQLKALHLLLEKTPQEIAKSQ-SEGASLPYSMVMMFLF 413
C+++E AL PL ++ E+G R L+A+ LL+ +T +E+ K E + +P +V++ LF
Sbjct: 134 CQHMEQALKPLCPNLAELGKPSRLLRAMSLLIVQTAEELVKQTIGEDSLVPSYIVLLLLF 193
Query: 412 SHAGHQLLAPHTCAGWNIQKLMQWLDTHRSEKERLDFVAGALQRYQNHIRQNQIASYDEV 233
HAG L +PHT A W+ ++L++WLD H +E+E+L+ ++GALQRY+++ R+ I YDEV
Sbjct: 194 GHAGADLQSPHTTANWSNERLIEWLDGHTAEREKLELISGALQRYRDNARRKNIQQYDEV 253
Query: 232 YPVLLQMLEDGRNSL 188
YP+++ E +L
Sbjct: 254 YPMMVDYFEQALKAL 268
>AE014134-2855|AAN10990.1| 751|Drosophila melanogaster CG6549-PC,
isoform C protein.
Length = 751
Score = 175 bits (427), Expect = 4e-44
Identities = 76/195 (38%), Positives = 132/195 (67%), Gaps = 1/195 (0%)
Frame = -2
Query: 769 KNLQQFVSRCKDIYLSMYNEKPALNECYMNIARSCIERFIYHICNVRPLSKFGRVKLQID 590
K LQ+FV+R +++++++K +C +A+ CIE F++++C +RPLS GR +L+ D
Sbjct: 556 KELQEFVNRSWSHHIALFDDKQMTKKCGHELAKRCIELFLHNVCILRPLSSCGRQRLKQD 615
Query: 589 CKYLEVALSPLVSDMTEIGDYYRQLKALHLLLEKTPQEIAKSQ-SEGASLPYSMVMMFLF 413
C+++E AL PL ++ E+G R L+A+ LL+ +T +E+ K E + +P +V++ LF
Sbjct: 616 CQHMEQALKPLCPNLAELGKPSRLLRAMSLLIVQTAEELVKQTIGEDSLVPSYIVLLLLF 675
Query: 412 SHAGHQLLAPHTCAGWNIQKLMQWLDTHRSEKERLDFVAGALQRYQNHIRQNQIASYDEV 233
HAG L +PHT A W+ ++L++WLD H +E+E+L+ ++GALQRY+++ R+ I YDEV
Sbjct: 676 GHAGADLQSPHTTANWSNERLIEWLDGHTAEREKLELISGALQRYRDNARRKNIQQYDEV 735
Query: 232 YPVLLQMLEDGRNSL 188
YP+++ E +L
Sbjct: 736 YPMMVDYFEQALKAL 750
>AE014134-2854|AAF53619.1| 751|Drosophila melanogaster CG6549-PA,
isoform A protein.
Length = 751
Score = 175 bits (427), Expect = 4e-44
Identities = 76/195 (38%), Positives = 132/195 (67%), Gaps = 1/195 (0%)
Frame = -2
Query: 769 KNLQQFVSRCKDIYLSMYNEKPALNECYMNIARSCIERFIYHICNVRPLSKFGRVKLQID 590
K LQ+FV+R +++++++K +C +A+ CIE F++++C +RPLS GR +L+ D
Sbjct: 556 KELQEFVNRSWSHHIALFDDKQMTKKCGHELAKRCIELFLHNVCILRPLSSCGRQRLKQD 615
Query: 589 CKYLEVALSPLVSDMTEIGDYYRQLKALHLLLEKTPQEIAKSQ-SEGASLPYSMVMMFLF 413
C+++E AL PL ++ E+G R L+A+ LL+ +T +E+ K E + +P +V++ LF
Sbjct: 616 CQHMEQALKPLCPNLAELGKPSRLLRAMSLLIVQTAEELVKQTIGEDSLVPSYIVLLLLF 675
Query: 412 SHAGHQLLAPHTCAGWNIQKLMQWLDTHRSEKERLDFVAGALQRYQNHIRQNQIASYDEV 233
HAG L +PHT A W+ ++L++WLD H +E+E+L+ ++GALQRY+++ R+ I YDEV
Sbjct: 676 GHAGADLQSPHTTANWSNERLIEWLDGHTAEREKLELISGALQRYRDNARRKNIQQYDEV 735
Query: 232 YPVLLQMLEDGRNSL 188
YP+++ E +L
Sbjct: 736 YPMMVDYFEQALKAL 750
>BT016089-1|AAV36974.1| 1341|Drosophila melanogaster LD40982p
protein.
Length = 1341
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 706 PALNECYMNIARSCIERFIYHICNVRPLSKF 614
P LN C N+ R +ER Y +V P K+
Sbjct: 171 PTLNNCRHNVQRGALERSSYPTADVVPFQKY 201
>AY118494-1|AAM49863.1| 740|Drosophila melanogaster LD05535p
protein.
Length = 740
Score = 29.9 bits (64), Expect = 4.1
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = -2
Query: 766 NLQQFVSRCKDIYLSMYNEKPALNECYMNIARSCIERFIYHICNVRPLSKFGRVKLQIDC 587
N+ + S +I+ S+ K ++ M I + ++ + + +R SKFG ++Q+D
Sbjct: 635 NIHRLFSERVEIFTSVEFTKASI---IMGIIKIGLKTLLECV-RLRTFSKFGLQQIQVDA 690
Query: 586 KYLEVALSPLVSD 548
YL++ L VSD
Sbjct: 691 HYLQMNLWRFVSD 703
>AF145682-1|AAD38657.1| 1239|Drosophila melanogaster BcDNA.LD23336
protein.
Length = 1239
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 706 PALNECYMNIARSCIERFIYHICNVRPLSKF 614
P LN C N+ R +ER Y +V P K+
Sbjct: 69 PTLNNCRHNVQRGALERSSYPTADVVPFQKY 99
>AE014134-2148|AAF53157.2| 1296|Drosophila melanogaster CG7061-PB,
isoform B protein.
Length = 1296
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 706 PALNECYMNIARSCIERFIYHICNVRPLSKF 614
P LN C N+ R +ER Y +V P K+
Sbjct: 126 PTLNNCRHNVQRGALERSSYPTADVVPFQKY 156
>AE014134-2147|AAF53156.2| 1341|Drosophila melanogaster CG7061-PA,
isoform A protein.
Length = 1341
Score = 29.9 bits (64), Expect = 4.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 706 PALNECYMNIARSCIERFIYHICNVRPLSKF 614
P LN C N+ R +ER Y +V P K+
Sbjct: 171 PTLNNCRHNVQRGALERSSYPTADVVPFQKY 201
>AE013599-2751|AAF57649.3| 740|Drosophila melanogaster CG15087-PA
protein.
Length = 740
Score = 29.9 bits (64), Expect = 4.1
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = -2
Query: 766 NLQQFVSRCKDIYLSMYNEKPALNECYMNIARSCIERFIYHICNVRPLSKFGRVKLQIDC 587
N+ + S +I+ S+ K ++ M I + ++ + + +R SKFG ++Q+D
Sbjct: 635 NIHRLFSERVEIFTSVEFTKASI---IMGIIKIGLKTLLECV-RLRTFSKFGLQQIQVDA 690
Query: 586 KYLEVALSPLVSD 548
YL++ L VSD
Sbjct: 691 HYLQMNLWRFVSD 703
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,985,784
Number of Sequences: 53049
Number of extensions: 620558
Number of successful extensions: 1243
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1239
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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