Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11p10
(834 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 334 7e-93
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 150 3e-37
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 146 3e-36
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 134 1e-32
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 121 1e-28
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 118 1e-27
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 112 7e-26
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 103 4e-23
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 101 1e-22
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 99 9e-22
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 95 8e-21
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 93 3e-20
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 93 3e-20
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 87 2e-18
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 83 4e-17
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 78 1e-15
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 78 1e-15
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 67 3e-12
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 63 4e-11
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 63 5e-11
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 62 9e-11
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 58 2e-09
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 57 4e-09
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 46 7e-06
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 46 7e-06
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 44 3e-05
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 35 0.012
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 35 0.012
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 34 0.022
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 30 0.35
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 29 1.1
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 27 4.3
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 27 4.3
SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces p... 26 5.7
SPBC2G2.08 |ade9||C-1-tetrahydrofolatesynthase/methylenetetrahyd... 26 5.7
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 334 bits (822), Expect = 7e-93
Identities = 156/234 (66%), Positives = 189/234 (80%)
Frame = -2
Query: 818 KHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPMEVY 639
KHF+LDECDK+LES+DMRRD+QE+FR TP KQVMMFSATLS EIRP+CKKFMQ+P+E+Y
Sbjct: 199 KHFVLDECDKLLESVDMRRDIQEVFRATPPQKQVMMFSATLSNEIRPICKKFMQNPLEIY 258
Query: 638 VDDEAKLKLHGLQQHYVXXXXXXXXXXXXXXLDVLEFNQVVIFVKSVQRCIALAQLLTDQ 459
VDDE KL LHGLQQHYV LD LEFNQVVIFVKSV R L +LL +
Sbjct: 259 VDDETKLTLHGLQQHYVKLEEKAKNRKINDLLDSLEFNQVVIFVKSVSRANELDRLLREC 318
Query: 458 NFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDT 279
NFP+I IH + Q+ER+ RY+ FKDF KRI VAT++FGRG+DIERVNIV NYDMP+ D+
Sbjct: 319 NFPSICIHGGLPQEERIKRYKAFKDFDKRICVATDVFGRGIDIERVNIVINYDMPDSPDS 378
Query: 278 YLHRVARAGRFGTKGLAITMISDENDAKILNQVQDRFDVNITELPEEIELSTYI 117
YLHRV RAGRFGTKGLAIT S E D++IL+++Q+RF+VNITELP+EI++ +Y+
Sbjct: 379 YLHRVGRAGRFGTKGLAITFSSSEEDSQILDKIQERFEVNITELPDEIDVGSYM 432
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 150 bits (363), Expect = 3e-37
Identities = 76/232 (32%), Positives = 133/232 (57%), Gaps = 1/232 (0%)
Frame = -2
Query: 827 KHXKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPM 648
++ K ILDE D++L + + +I+R P G QV++ SATL +++ + KF +P+
Sbjct: 162 RNVKMLILDEADELLNQ-GFKEQIYDIYRYLPPGTQVVVVSATLPQDVLEMTNKFTTNPV 220
Query: 647 EVYVDDEAKLKLHGLQQHYVXXXXXXXXXXXXXXL-DVLEFNQVVIFVKSVQRCIALAQL 471
+ V + +L L GL+Q+++ L D L Q VIF S ++ L +
Sbjct: 221 RILVKRD-ELTLEGLKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNSRRKVDWLTEK 279
Query: 470 LTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPE 291
+ + NF +H M Q ER + Q F+ R+L+ T+++ RG+D+++V++V NYD+P
Sbjct: 280 MREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLVINYDLPA 339
Query: 290 DSDTYLHRVARAGRFGTKGLAITMISDENDAKILNQVQDRFDVNITELPEEI 135
+ + Y+HR+ R+GRFG KG+AI +++E D +IL ++ + I E+P I
Sbjct: 340 NRENYIHRIGRSGRFGRKGVAINFVTNE-DVRILRDIEQYYSTVIDEMPMNI 390
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 146 bits (355), Expect = 3e-36
Identities = 73/227 (32%), Positives = 136/227 (59%), Gaps = 1/227 (0%)
Frame = -2
Query: 812 FILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPMEVYVD 633
F+LDE D+ML S + + +IF+ P QV++ SAT+ +++ V KFM+DP+ + V
Sbjct: 165 FVLDEADEML-SRGFKDQIYDIFQLLPPTAQVVLLSATMPQDVLEVTTKFMRDPIRILVK 223
Query: 632 DEAKLKLHGLQQHYVXXXXXXXXXXXXXXL-DVLEFNQVVIFVKSVQRCIALAQLLTDQN 456
+ +L L G++Q YV L + + Q VIF + ++ L + LT+++
Sbjct: 224 KD-ELTLEGIKQFYVAVEKEEWKLDTLCDLYETVTVTQAVIFCNTRRKVDWLTEQLTERD 282
Query: 455 FPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTY 276
F +H +M Q +R + +F+ RIL+ T+L RG+D+++V++V NYD+P + + Y
Sbjct: 283 FTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLARGIDVQQVSLVINYDLPANRENY 342
Query: 275 LHRVARAGRFGTKGLAITMISDENDAKILNQVQDRFDVNITELPEEI 135
+HR+ R GRFG KG++I ++++ D +++ +++ ++ +I E+P I
Sbjct: 343 IHRIGRGGRFGRKGVSINFVTND-DVRMMREIEQFYNTHIEEMPMNI 388
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 134 bits (325), Expect = 1e-32
Identities = 74/232 (31%), Positives = 123/232 (53%)
Frame = -2
Query: 812 FILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPMEVYVD 633
F++DE DK+L S + ++++ P +Q+ ++SAT ++ K + P E+ +
Sbjct: 190 FVMDEADKLL-SPEFTPIIEQLLSYFPKNRQISLYSATFPLIVKNFMDKHLNKPYEINLM 248
Query: 632 DEAKLKLHGLQQHYVXXXXXXXXXXXXXXLDVLEFNQVVIFVKSVQRCIALAQLLTDQNF 453
DE L L G+ Q+Y L+ NQ +IF S R LA+ +T+ +
Sbjct: 249 DE--LTLRGVTQYYAFVDESQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGY 306
Query: 452 PAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYL 273
H M Q R + F++ R LV ++L RG+DI+ VN+V N+D P++++TYL
Sbjct: 307 SCFYSHAKMLQSHRNRVFHNFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYL 366
Query: 272 HRVARAGRFGTKGLAITMISDENDAKILNQVQDRFDVNITELPEEIELSTYI 117
HR+ R+GRFG +GLAI+ IS D L ++++ I +P I+ S Y+
Sbjct: 367 HRIGRSGRFGHRGLAISFIS-WADRFNLYRIENELGTEIQPIPPSIDPSLYV 417
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 121 bits (292), Expect = 1e-28
Identities = 64/205 (31%), Positives = 111/205 (54%)
Frame = -2
Query: 827 KHXKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPM 648
K+ K+ I+DE D++L+ +D + +I + PH ++ ++FSAT++ ++ + + + P+
Sbjct: 188 KNLKYLIMDEADRLLD-MDFGPIIDKILKIIPHERRTLLFSATMTSKVEKLQRASLHQPV 246
Query: 647 EVYVDDEAKLKLHGLQQHYVXXXXXXXXXXXXXXLDVLEFNQVVIFVKSVQRCIALAQLL 468
V V + + L Q Y+ ++ L N ++IF ++V LA LL
Sbjct: 247 RVAVSSKFST-VDTLIQRYLFFPFKHKDTYLVYLVNELAGNSIIIFARTVNDTQRLAILL 305
Query: 467 TDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPED 288
F AI +H ++Q RL +FK + LVAT++ RG+DI V++V NYD+P D
Sbjct: 306 RTLGFSAIPLHGQLSQSNRLGALNKFKSGARSTLVATDVAARGLDIPLVDVVINYDIPTD 365
Query: 287 SDTYLHRVARAGRFGTKGLAITMIS 213
S Y+HRV R R G G +I +++
Sbjct: 366 SKAYIHRVGRTARAGRAGKSIALVT 390
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 118 bits (283), Expect = 1e-27
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 7/234 (2%)
Frame = -2
Query: 818 KHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPMEVY 639
K F+LDE D ML+ + I P Q+++FSAT S+ + ++F + E+
Sbjct: 256 KVFVLDEADNMLDQQGLGDQSMRIKHLLPRNTQIVLFSATFSERVEKYAERFAPNANEIR 315
Query: 638 VDDEAKLKLHGLQQHYVXXXXXXXXXXXXXXL-DVLEFNQVVIFVKSVQRCIALAQLLTD 462
+ E +L + G++Q Y+ L +L Q +IF K +A+ +T
Sbjct: 316 LKTE-ELSVEGIKQLYMDCQSEEHKYNVLVELYGLLTIGQSIIFCKKKDTAEEIARRMTA 374
Query: 461 QNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMP---- 294
+ N+ +R + F+ ++LV TN+ RG+D+ +VN+V NYDMP
Sbjct: 375 DGHTVACLTGNLEGAQRDAIMDSFRVGTSKVLVTTNVIARGIDVSQVNLVVNYDMPLDQA 434
Query: 293 --EDSDTYLHRVARAGRFGTKGLAITMISDENDAKILNQVQDRFDVNITELPEE 138
D TYLHR+ R GRFG G++I + D+ + +N +Q+ F IT +P +
Sbjct: 435 GRPDPQTYLHRIGRTGRFGRVGVSINFVHDKKSWEEMNAIQEYFQRPITRVPTD 488
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 112 bits (269), Expect = 7e-26
Identities = 68/244 (27%), Positives = 122/244 (50%), Gaps = 3/244 (1%)
Frame = -2
Query: 833 NXKHXKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQD 654
N + + +LDE D+ML+ + +++I +Q +MFSAT KE++ + + ++ D
Sbjct: 266 NLRRVTYLVLDEADRMLD-MGFEPQIRKIVDQIRPDRQTVMFSATWPKEVQRLARDYLND 324
Query: 653 PMEVYVDDEAKLKLHGLQQHY-VXXXXXXXXXXXXXXLDVLEF--NQVVIFVKSVQRCIA 483
++V V H ++Q V +VL+ N+V+IF + +
Sbjct: 325 YIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGKDIEEVLKDRDNKVLIFTGTKRVADD 384
Query: 482 LAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY 303
+ + L +PA+ IH + QDER +F+ + I+VAT++ RG+D++ + VFNY
Sbjct: 385 ITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRGIDVKGITHVFNY 444
Query: 302 DMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKILNQVQDRFDVNITELPEEIELST 123
D P +++ Y+HR+ R GR G KG A T + +N + V + P+ E++
Sbjct: 445 DFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAKQARELVSILSEAKQDIDPKLEEMAR 504
Query: 122 YIEG 111
Y G
Sbjct: 505 YSSG 508
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 103 bits (246), Expect = 4e-23
Identities = 64/224 (28%), Positives = 114/224 (50%), Gaps = 3/224 (1%)
Frame = -2
Query: 809 ILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPMEVYVDD 630
++DE D+MLE ++ EI + P +Q M+FSAT++ ++ + + + P+ V+VD+
Sbjct: 410 VMDEADRMLED-GFADELNEIIQACPKSRQTMLFSATMTDKVDDLIRLSLNRPVRVFVDN 468
Query: 629 EAKLKLHGLQQHYVXXXXXXXXXXXXXXLDV---LEFNQVVIFVKSVQRCIALAQLLTDQ 459
+ K L Q +V + + L + +IF +S + +
Sbjct: 469 K-KTTAKLLTQEFVRVRPQRELLRPAMLIYLCKELFHRRTIIFFRSKAFAHKMRVIFGLL 527
Query: 458 NFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDT 279
+ A IH +++Q++R+ + F+D + L+AT++ RG+DI+ + +V NY+ P +
Sbjct: 528 SLNATEIHGSLSQEQRVRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAPATHEV 587
Query: 278 YLHRVARAGRFGTKGLAITMISDENDAKILNQVQDRFDVNITEL 147
YLHRV R R G G AIT ++ E D K+L V T+L
Sbjct: 588 YLHRVGRTARAGRSGRAIT-LAGEGDRKVLKGVFKNSSAQNTKL 630
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 101 bits (242), Expect = 1e-22
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 3/208 (1%)
Frame = -2
Query: 818 KHFILDECDKMLE---SLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPM 648
K +LDE D+ML+ +R V+ + +Q +MFSAT ++I+ + + F++D +
Sbjct: 331 KFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYV 390
Query: 647 EVYVDDEAKLKLHGLQQHYVXXXXXXXXXXXXXXLDVLEFNQVVIFVKSVQRCIALAQLL 468
+ V + Q+ + +IFV++ + L L
Sbjct: 391 FLSVGRVGSTSENITQKVVHVEDSEKRSYLLDILHTLPPEGLTLIFVETKRMADTLTDYL 450
Query: 467 TDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPED 288
+ NFPA IH + TQ ER + F+ + I+VAT + RG+DI V V NYD+P D
Sbjct: 451 LNSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTD 510
Query: 287 SDTYLHRVARAGRFGTKGLAITMISDEN 204
D Y+HR+ R GR G G A+ + N
Sbjct: 511 IDDYVHRIGRTGRAGNTGQAVAFFNRNN 538
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 98.7 bits (235), Expect = 9e-22
Identities = 64/234 (27%), Positives = 116/234 (49%), Gaps = 8/234 (3%)
Frame = -2
Query: 827 KHXKHFILDECDKMLESLDMRRDVQEIFRNTP--HGKQVMMFSATLSKEIRPVC---KKF 663
+ K ++DE D++L S D+ + F P +Q ++F+AT++ IR + +K
Sbjct: 152 RRIKFLVMDEADRLL-SPTFADDLDDCFSVLPASEDRQTLLFTATVTDAIRQLKYQPQKN 210
Query: 662 MQDPMEVYVDDEAKLKLHG-LQQHYVXXXXXXXXXXXXXXLDVLEF--NQVVIFVKSVQR 492
+ P+ +Y + + + LQQ Y+ L + E +IFV +
Sbjct: 211 NKPPLWLYEVETDNISVPSTLQQSYIFVSSQVREAYLVHLLTIPENAKKSAIIFVNRTRT 270
Query: 491 CIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIV 312
+ +L +H M Q ER++ +F+ +ILVAT++ RG+DI V +V
Sbjct: 271 AELIYSILRLLELRVTELHSEMVQRERINSLGRFRAEAAKILVATDVASRGLDIPSVQLV 330
Query: 311 FNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKILNQVQDRFDVNITE 150
N+D+P D D Y+HRV R R G G +I++++ E D +++ ++DR ++E
Sbjct: 331 INFDLPRDPDDYIHRVGRTARAGRSGESISIVT-ERDVDLVHAIEDRVGTKLSE 383
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 95.5 bits (227), Expect = 8e-21
Identities = 62/238 (26%), Positives = 112/238 (47%), Gaps = 4/238 (1%)
Frame = -2
Query: 833 NXKHXKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQD 654
N + +LDE D+M + L V I N +Q ++FSAT + + + +K ++
Sbjct: 565 NLHRCTYLVLDEADRMFD-LGFEPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVLKK 623
Query: 653 PMEVYVDDEAKLKLHGLQQHYVXXXXXXXXXXXXXXLDVLEFNQV----VIFVKSVQRCI 486
P+E+ V + + ++Q L L NQ+ ++FV +
Sbjct: 624 PVEITVGGRSVVASE-VEQIVEVRPEESKFSRLLELLGELYNNQLDVRTLVFVDRQESAD 682
Query: 485 ALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFN 306
AL L + + + IH Q +R S +K +L+AT++ RG+D++ + +V N
Sbjct: 683 ALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVN 742
Query: 305 YDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKILNQVQDRFDVNITELPEEIE 132
YD P + Y+HRV R GR G G+A+T I+ E + K + ++ +P+E++
Sbjct: 743 YDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQE-KYAVDIAKALKMSKQPVPKELQ 799
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 93.5 bits (222), Expect = 3e-20
Identities = 57/201 (28%), Positives = 105/201 (52%), Gaps = 3/201 (1%)
Frame = -2
Query: 827 KHXKHFILDECDKMLESLDMRRDVQEIFRNTP-HGKQVMMFSATLSKEIRPVCKKFMQD- 654
++ + ++DE D++LE + ++++I + P +Q ++FSAT + ++ + + ++
Sbjct: 235 RNLRSLVIDEADRILE-IGFEDEMRQIMKILPSENRQTLLFSATQTTKVEDLARISLKPG 293
Query: 653 PMEVYVDD-EAKLKLHGLQQHYVXXXXXXXXXXXXXXLDVLEFNQVVIFVKSVQRCIALA 477
P+ V VD + + GL+Q YV L +V++F+ S +A
Sbjct: 294 PLYVNVDSGKPTSTVEGLEQGYVVVDSDKRFLLLFSFLKRNLKKKVIVFMSSCASVKYMA 353
Query: 476 QLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM 297
+LL + P + +H Q R + + +F + +K IL+ TN+ RG+DI V+ + YD
Sbjct: 354 ELLNYIDLPVLDLHGKQKQQRRTNTFFEFCNAEKGILLCTNVAARGLDIPAVDWIVQYDP 413
Query: 296 PEDSDTYLHRVARAGRFGTKG 234
P+D Y+HRV R R GTKG
Sbjct: 414 PDDPRDYIHRVGRTAR-GTKG 433
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 93.5 bits (222), Expect = 3e-20
Identities = 58/217 (26%), Positives = 108/217 (49%), Gaps = 13/217 (5%)
Frame = -2
Query: 815 HFILDECDKMLESLDMRRDVQEIFRNTPH-----GKQVMMFSATLSKEIRPVCKKFMQDP 651
+ +LDE D+ML++ +D++ I +TP +Q + FSAT + +R + F++DP
Sbjct: 312 YLVLDEADRMLDT-GFEQDIRNIISHTPDPTRNGSRQTVFFSATWPESVRALAATFLKDP 370
Query: 650 MEVYVDDEAKLKLHGLQQHYVXXXXXXXXXXXXXXLDVL--------EFNQVVIFVKSVQ 495
+++ + + + Q + ++L + ++++IFV +
Sbjct: 371 VKITIGSDELAASQNITQ--IVEILDDPRSKERMLDNLLRKHLSSGGKDDKILIFVLYKK 428
Query: 494 RCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNI 315
+ L + + +GIH +M+Q RL FK + +LVAT++ RG+DI +V +
Sbjct: 429 EAARVEGTLA-RKYNVVGIHGDMSQGARLQALNDFKSGKCPVLVATDVAARGLDIPKVQL 487
Query: 314 VFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDEN 204
V N P + Y+HR+ R GR TKG AIT + ++
Sbjct: 488 VINVTFPLTIEDYVHRIGRTGRANTKGTAITFFTPQD 524
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 87.4 bits (207), Expect = 2e-18
Identities = 51/178 (28%), Positives = 95/178 (53%), Gaps = 4/178 (2%)
Frame = -2
Query: 725 KQVMMFSATLSKEIRPVCKKFMQDPMEVYVDDEAKLKLHGLQQHYVXXXXXXXXXXXXXX 546
+Q +MFSATL + + K ++ +P+ + + + + + ++Q
Sbjct: 450 RQTIMFSATLPPRVANLAKSYLIEPVMLTIGNIGQA-VDRVEQRV--EMISDDSKKWRRV 506
Query: 545 LDVLEFNQ----VVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQ 378
++LE N+ ++IFV + A+A+ L + A+ +H + +Q++R +Q ++
Sbjct: 507 EEILESNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKT 566
Query: 377 KRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDEN 204
ILVAT++ GRG+DI V++V NY+M + + Y HR+ R GR G G AIT + E+
Sbjct: 567 ADILVATDIAGRGIDIPNVSLVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPED 624
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 83.4 bits (197), Expect = 4e-17
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 2/205 (0%)
Frame = -2
Query: 812 FILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPMEVYVD 633
F++DE D++ E + + + T +FSAT+ + + K DP+ + V
Sbjct: 193 FVMDEADRLFEPGFIEQTDHILSACTSSNICKSLFSATIPSRVEELAKVVTVDPIRIIVG 252
Query: 632 -DEAKLKLHGLQQHYVXXXXXXXXXXXXXXLDVLEFNQVVIFVKSVQRCIAL-AQLLTDQ 459
+A + +V + +VVIFV+ ++R AL +LL D+
Sbjct: 253 LKDAATDSIDQRLLFVGSDTSKIVILRQMISNGELKPRVVIFVQDIERAKALYTELLFDE 312
Query: 458 NFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDT 279
+ IH + Q +R +F+ + +L+AT+L RG+D V +V N+D P+ +
Sbjct: 313 IHVGV-IHGELPQAKREEALAKFRKGEIWVLIATDLLARGIDFHGVKMVINFDFPQSVHS 371
Query: 278 YLHRVARAGRFGTKGLAITMISDEN 204
Y+HR+ R GR G G A+T + E+
Sbjct: 372 YIHRIGRTGRAGNTGQAVTFFTKED 396
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 78.2 bits (184), Expect = 1e-15
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 8/240 (3%)
Frame = -2
Query: 827 KHXKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCK-KFMQDP 651
KH + ILDE D +++ + +R +Q I P ++ +FSAT++ + K +++
Sbjct: 153 KHLEILILDEADTLID-MGFQRTLQSIISQLPKQRRTGLFSATMNDTVSSFLKIAGLRNS 211
Query: 650 MEVYVDDEAKL----KLHGLQQHYVXXXXXXXXXXXXXXLDVLEFNQVVIFVKSVQRCIA 483
+ V V +K L + L +E+ + ++F S
Sbjct: 212 VRVSVTVTSKKIDTRTPSSLAIQSLVIPPIYKVQCMIHLLCTIEYEKAIVFFSSCASVEY 271
Query: 482 LAQLLTDQNFP--AIGIHRNMTQDERLSRYQQFKDFQKR-ILVATNLFGRGMDIERVNIV 312
L P + +H Q R +++FK K+ +L T++ RG+DI V+ V
Sbjct: 272 FNSLFLTYKLPFEIVALHGQQVQSNRSRNFEKFKKSNKKTVLFTTDIASRGLDIPNVDFV 331
Query: 311 FNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKILNQVQDRFDVNITELPEEIE 132
D P D ++ HR RAGR G G+AI +++D + + ++ R V IT + IE
Sbjct: 332 LQLDPPLDPKSFSHRCGRAGRAGRAGVAIVLLNDGREEEYEELLRVR-KVPITRIDTPIE 390
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 78.2 bits (184), Expect = 1e-15
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 5/209 (2%)
Frame = -2
Query: 809 ILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPMEVYV-D 633
ILDE D++L+ + R + I + P +Q M+FSAT +K ++ + + +Q+P + V +
Sbjct: 190 ILDEADRILD-MGFRTTLDAIVSSLPVHRQTMLFSATQTKSVKDLARLSLQNPDFISVHE 248
Query: 632 DEAKLKLHGLQQHYVXXXXXXXXXXXXXXLDV-LEFNQVVIFVKSVQRCIALAQLLTDQN 456
++ L Q Y+ + L+F + ++F+ S ++ + +
Sbjct: 249 NDTSSTPSNLNQFYLTVPLTEKLDILFGFIRTHLKF-KTIVFLSSCKQVRFVYETFRRMR 307
Query: 455 FPAIGI---HRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDS 285
P I + H Q R +F + +L T++ RG+D V+ V D PED
Sbjct: 308 -PGISLLHLHGKQKQTTRTEVTAKFTSSRHVVLFCTDIVARGLDFPAVDWVIQLDAPEDV 366
Query: 284 DTYLHRVARAGRFGTKGLAITMISDENDA 198
DTY+HRV R R+ G A+ ++ +A
Sbjct: 367 DTYIHRVGRTARYNRSGNALLLLLPSEEA 395
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 66.9 bits (156), Expect = 3e-12
Identities = 30/102 (29%), Positives = 54/102 (52%)
Frame = -2
Query: 524 QVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFG 345
+ ++F ++ + L + P+ +H + Q +RL ++FK+ K +LV T++
Sbjct: 391 KTMVFANGIEDIKRITPFLNELKVPSYPLHAQLDQKKRLQSLEKFKNNPKGVLVCTDVAA 450
Query: 344 RGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITM 219
RG+DI V V +Y +P +D Y+HR R R G++I M
Sbjct: 451 RGIDIPSVTHVIHYHVPHTADMYVHRSGRTARANEDGVSILM 492
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 63.3 bits (147), Expect = 4e-11
Identities = 31/114 (27%), Positives = 59/114 (51%)
Frame = -2
Query: 527 NQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLF 348
+ ++FV + +++LL + I+ ++ Q+ RL+ F+ + +LV T++
Sbjct: 347 DSTLVFVPTKHHVEYVSELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVA 406
Query: 347 GRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKILN 186
RG+DI + V NYD P ++HRV R R G G A +++ E+ +L+
Sbjct: 407 SRGIDIPLLANVINYDFPPQPKVFVHRVGRTARAGRTGWAYSLVRAEDAGYLLD 460
Score = 43.6 bits (98), Expect = 4e-05
Identities = 21/67 (31%), Positives = 38/67 (56%)
Frame = -2
Query: 818 KHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPMEVY 639
++ + DE D++ E + + EI P +Q ++FSATL + + K +QDP+ V
Sbjct: 215 EYVVFDEADRLFE-MGFAAQLTEILHALPTSRQTLLFSATLPRTLVDFAKAGLQDPVLVR 273
Query: 638 VDDEAKL 618
+D E+K+
Sbjct: 274 LDVESKV 280
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 62.9 bits (146), Expect = 5e-11
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Frame = -2
Query: 440 IHRNMTQDERLSRYQQF---KDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLH 270
+H +++Q R S F +D IL+ T++ RG+D+ V++V YD P +D YLH
Sbjct: 473 LHGSLSQQIRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQYDAPFSTDDYLH 532
Query: 269 RVARAGRFGTKGLAITMISDENDAKILNQVQDRFDVNITELP 144
R+ R R G G AI + + +++ +N ++ NI E P
Sbjct: 533 RIGRTARAGHNGAAIMFLLPK-ESEYINLLKSSVSANILEQP 573
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 62.1 bits (144), Expect = 9e-11
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = -2
Query: 527 NQVVIFVKSVQRCIALAQLLTDQ-NFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNL 351
+++++F+ ++ + +L + P +H +T +R S + F+ Q IL AT++
Sbjct: 293 SRIIVFLPTISMVDFVGGVLENHLKIPCFILHSGLTTAQRRSITESFRKCQSGILFATDV 352
Query: 350 FGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMISDENDAKILNQVQ 177
RGMD + V P ++D Y+HR+ R GR G G A +I E + LN ++
Sbjct: 353 VARGMDFPNITQVVQITGPSNTDDYIHRIGRTGRAGKTGEAY-LILLEQEKPFLNSIK 409
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 57.6 bits (133), Expect = 2e-09
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Frame = -2
Query: 521 VVIFVKSVQRCIALAQLLT------DQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVA 360
++ FVKS + L +LL +Q+F ++++DER +F +LV
Sbjct: 434 ILCFVKSNEAAARLHRLLELIHESLNQSFSCGLFTSSLSRDERKKIISRFATGDLNLLVC 493
Query: 359 TNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMI 216
++L RG+D+ V NYD P +Y+HR+ R R G +G A T++
Sbjct: 494 SDLMARGIDVANTQNVINYDPPLSVRSYVHRIGRTARAGREGFAWTLV 541
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 56.8 bits (131), Expect = 4e-09
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 2/168 (1%)
Frame = -2
Query: 818 KHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQDPMEVY 639
K ++DE D ML S D++ + R+ P G Q + SATLSK I + K ++P +
Sbjct: 166 KFLVIDEADLML-SFGYNEDMKTLSRSLPRGTQSFLMSATLSKNIASLQKLVCRNPFILA 224
Query: 638 V-DDEAKLKLHGLQQHYVXXXXXXXXXXXXXXLDV-LEFNQVVIFVKSVQRCIALAQLLT 465
V D EA K L Q+ V L + L +++IFV + RC L L
Sbjct: 225 VKDKEASGK---LTQYVVKCSEQDKFLLAYILLKLRLIKGKILIFVNEINRCYRLKLFLE 281
Query: 464 DQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERV 321
++ ++ + + RL +Q+ +I++AT+ G +IE +
Sbjct: 282 QFGLKSLVLNSELPVNSRLHILEQYNKGLYQIIIATDESGMMGEIEEL 329
Score = 48.8 bits (111), Expect = 9e-07
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = -2
Query: 419 DERLSRYQQFKDFQKRILVATNLFG--RGMDIERVNIVFNYDMPEDSDTYLHRVARAGRF 246
DE + + K +K+ + +G RG+D E V V N+DMP ++ +Y+HR+ R R
Sbjct: 361 DESILAAAKDKSKKKKRVKQDKEYGVARGLDFENVACVLNFDMPSNTKSYIHRIGRTARA 420
Query: 245 GTKGLAITMISDEND 201
G G A++ + +++
Sbjct: 421 GKPGTAMSFVVPKSE 435
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 46.0 bits (104), Expect = 7e-06
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = -2
Query: 431 NMTQDERLSRYQQFKDF--QKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVAR 258
+++ +ER + F++ + RI++AT FG G++ V +V +Y +P S Y+ R
Sbjct: 1452 DVSDEERQMNFDAFRNANGKTRIMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQETGR 1511
Query: 257 AGRFGTKGLAITMISDENDAKILNQVQD 174
AGR G +A + ++ D+ + V+D
Sbjct: 1512 AGRDGKYAIA-ALFYEKYDSTWSSYVED 1538
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 46.0 bits (104), Expect = 7e-06
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = -2
Query: 431 NMTQDERLSRYQQFKDF--QKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVAR 258
+++ +ER + F++ + RI++AT FG G++ V +V +Y +P S Y+ R
Sbjct: 1452 DVSDEERQMNFDAFRNANGKTRIMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQETGR 1511
Query: 257 AGRFGTKGLAITMISDENDAKILNQVQD 174
AGR G +A + ++ D+ + V+D
Sbjct: 1512 AGRDGKYAIA-ALFYEKYDSTWSSYVED 1538
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 44.0 bits (99), Expect = 3e-05
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Frame = -2
Query: 518 VIFVKSVQRCIALA-QLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGR 342
+I+ S C +A +L D A H + + ER +++ +I+VAT FG
Sbjct: 746 IIYCLSRTSCEQVAAKLRNDYGLKAWHYHAGLEKVERQRIQNEWQSGSYKIIVATIAFGM 805
Query: 341 GMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMIS 213
G+D V V ++ P+ + Y RAGR G I S
Sbjct: 806 GVDKGDVRFVIHHSFPKSLEGYYQETGRAGRDGKPAHCIMFYS 848
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 35.1 bits (77), Expect = 0.012
Identities = 28/129 (21%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Frame = -2
Query: 527 NQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRI---LVAT 357
++ ++F + Q + L +N+ + + + D+R S QF D + + +++T
Sbjct: 1204 HKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLST 1263
Query: 356 NLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFG-TKGLAITMISDEN--DAKILN 186
G G++++ + V +D + L RA R G TK + I + E + IL+
Sbjct: 1264 RAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKSIEENILS 1323
Query: 185 QVQDRFDVN 159
+ Q + D++
Sbjct: 1324 RAQYKLDLD 1332
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 35.1 bits (77), Expect = 0.012
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = -2
Query: 428 MTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 249
M+Q + +QF+ + L+AT++ G+DI V+++ YD L R+ R GR
Sbjct: 476 MSQKLQNETVKQFQKGEVNTLIATSIGEEGLDIGEVDMIICYDASASPIRMLQRMGRTGR 535
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 34.3 bits (75), Expect = 0.022
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = -2
Query: 428 MTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 249
M Q ++ QF+ LVAT++ G+DI +++ YD + R+ R GR
Sbjct: 515 MNQMQQKETIDQFRAGVINTLVATSIGEEGLDIGDTDMIICYDASSSPIRTIQRMGRTGR 574
Query: 248 FGTKGLAITMISDENDAK 195
+ + + + D D+K
Sbjct: 575 KKSGKVFVLLTEDCEDSK 592
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 30.3 bits (65), Expect = 0.35
Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 12/110 (10%)
Frame = -2
Query: 524 QVVIFVKSVQRCIALAQLLTDQNFPAIGIHR------------NMTQDERLSRYQQFKDF 381
+ VIFV+ L+ + N P I H +MT + +FK
Sbjct: 363 RTVIFVERKATAFTLSLFMKTLNLPNIRAHSFIGHGPSDQGEFSMTFRRQKDTLHKFKTG 422
Query: 380 QKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGL 231
+ +L+AT + G+D+ N+V +++ Y+ RA +K L
Sbjct: 423 KYNVLIATAVAEEGIDVPSCNLVIRFNICRTVTQYVQSRGRARAMASKFL 472
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -2
Query: 368 LVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMI 216
++ATN G+DI ++ V P + RAGR LA+ ++
Sbjct: 614 IIATNALELGIDIGSLDAVITIGFPYSLSNLRQQFGRAGRRNKSSLAVYIV 664
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 26.6 bits (56), Expect = 4.3
Identities = 24/125 (19%), Positives = 51/125 (40%), Gaps = 6/125 (4%)
Frame = -2
Query: 527 NQVVIFVKSVQRCIALAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRI---LVAT 357
+++++F + +Q+ L +N ++ ER S F + L++T
Sbjct: 888 HRILLFSQFIQQLDILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSELSCFLLST 947
Query: 356 NLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITMI---SDENDAKILN 186
G G+++ + V D + + +ARA R+G K + + D + KI+
Sbjct: 948 RAGGVGINLASADTVIILDPDFNPHQDMQAIARAHRYGQKKKVLVFVLTTRDSVEEKIIQ 1007
Query: 185 QVQDR 171
Q +
Sbjct: 1008 NAQKK 1012
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.6 bits (56), Expect = 4.3
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Frame = -1
Query: 462 PKLPCHWYPQKY-DPG*ASLPLS---TVQGLPKKDPGCNKFVWPGNGH 331
P++P HWYP P P+S + LPK N+ P + H
Sbjct: 159 PQVPSHWYPVSLPSPNLPHQPISKPPVIPNLPKLQVHPNRLPHPIHNH 206
>SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1098
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 205 FSSDIIVMARPLVPNLPAR 261
+S+DI + A PLVP+LP +
Sbjct: 706 YSTDIPLKAEPLVPDLPVK 724
>SPBC2G2.08 |ade9||C-1-
tetrahydrofolatesynthase/methylenetetrahydrofolatedehydr
ogenase/methylenetetrahydrofolatecyclohydrolase/formylte
trahydrofolatesynthetase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 969
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 195 LGIIFIRYHSNGQTFGTKPSCAG 263
LGI +R S G TFG K AG
Sbjct: 425 LGIACVRQPSQGPTFGVKGGAAG 447
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,448,531
Number of Sequences: 5004
Number of extensions: 73883
Number of successful extensions: 234
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 410448950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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