Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11o23
(316 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 65 2e-13
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 62 2e-12
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 43 8e-07
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 36 9e-05
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 36 1e-04
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 32 0.001
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 31 0.003
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 28 0.023
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 20 8.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 20 8.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 20 8.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 20 8.1
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 20 8.1
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 64.9 bits (151), Expect = 2e-13
Identities = 22/54 (40%), Positives = 36/54 (66%)
Frame = -1
Query: 310 CEVCNKGFGLMRNLRSHMKLHAEEKPYVCEVCKKGFIRNSDMKSHLKIHTREKP 149
CE C+K F + NL H ++H +E+PY C+VC++ F + + H++IHT E+P
Sbjct: 122 CEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRHMRIHTGERP 175
Score = 62.1 bits (144), Expect = 2e-12
Identities = 26/55 (47%), Positives = 33/55 (60%)
Frame = -1
Query: 310 CEVCNKGFGLMRNLRSHMKLHAEEKPYVCEVCKKGFIRNSDMKSHLKIHTREKPF 146
C VC+K F L HM+ H EKPYVC+ C KGF + +K H + HT EKP+
Sbjct: 178 CTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTHTGEKPY 232
Score = 61.7 bits (143), Expect = 2e-12
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = -1
Query: 310 CEVCNKGFGLMRNLRSHMKLHAEEKPYVCEVCKKGFIRNSDMKSHLKIHTREKPFI 143
C+VC + F L HM++H E+P+ C VC K FI++ + H++ HT EKP++
Sbjct: 150 CDVCERAFEHSGKLHRHMRIHTGERPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYV 205
Score = 60.1 bits (139), Expect = 6e-12
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = -1
Query: 310 CEVCNKGFGLMRNLRSHMKLHAEEKPYVCEVCKKGFIRNSDMKSHLKIHTREKPF 146
C +C K F + L H + H EKPY CE C K F ++ H +IHT+E+P+
Sbjct: 94 CNICGKTFAVPARLTRHYRTHTGEKPYQCEYCSKSFSVKENLSVHRRIHTKERPY 148
Score = 56.4 bits (130), Expect = 8e-11
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = -1
Query: 313 ICEVCNKGFGLMRNLRSHMKLHAEEKPYVCEVCKKGFIRNSDMKSHLKIHTREKPF 146
+C+ C KGF + L+ H + H EKPY C++C K F N +K H H EK +
Sbjct: 205 VCKACGKGFTCSKQLKVHTRTHTGEKPYTCDICGKSFGYNHVLKLHQVAHYGEKVY 260
Score = 46.8 bits (106), Expect = 6e-08
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -1
Query: 310 CEVCNKGFGLMRNLRSHMKLHAEE--KPYVCEVCKKGFIRNSDMKSHLKIHTREKPFIDS 137
C +C K F +SH++ H +E PY C +C K F + + H + HT EKP+
Sbjct: 64 CLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTGEKPYQCE 123
Query: 136 SLTKS 122
+KS
Sbjct: 124 YCSKS 128
Score = 45.6 bits (103), Expect = 1e-07
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -1
Query: 310 CEVCNKGFGLMRNLRSHMKLHAEEKPYVCEVCKKGFIRNSDMKSHLKIHT 161
C++C K FG L+ H H EK Y C +C + F M+ H+K H+
Sbjct: 234 CDICGKSFGYNHVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIKTHS 283
Score = 32.7 bits (71), Expect = 0.001
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -1
Query: 244 EEKPYVCEVCKKGFIRNSDMKSHLKIHTRE 155
EEK Y C +C+K F + + +SHL+ H +E
Sbjct: 58 EEKTYQCLLCQKAFDQKNLYQSHLRSHGKE 87
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 61.7 bits (143), Expect = 2e-12
Identities = 22/55 (40%), Positives = 38/55 (69%)
Frame = -1
Query: 310 CEVCNKGFGLMRNLRSHMKLHAEEKPYVCEVCKKGFIRNSDMKSHLKIHTREKPF 146
C C+K F +L++HM+LH EKPY C C + F++ ++++ HL++HT E+P+
Sbjct: 12 CPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERPY 66
Score = 47.2 bits (107), Expect = 5e-08
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = -1
Query: 256 KLHAEEKPYVCEVCKKGFIRNSDMKSHLKIHTREKPFIDSSLTKSVVMI 110
+ H EKP+ C C K F R+ +K+H+++HT EKP+ S + V +
Sbjct: 2 RTHTGEKPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQV 50
Score = 42.3 bits (95), Expect = 1e-06
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -1
Query: 310 CEVCNKGFGLMRNLRSHMKLHAEEKPYVCEVC 215
C C++ F + NLR H+++H E+PY CE+C
Sbjct: 40 CSHCDRQFVQVANLRRHLRVHTGERPYACELC 71
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 43.2 bits (97), Expect = 8e-07
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = -1
Query: 310 CEVCNKGFGLMRNLRSHMKLHAEEKPYVCEVCKKGFIRNSDMKSHLKIHTREKPF 146
C+ C K + + L+ H++ H P C +C K F R ++ H++ HT EKPF
Sbjct: 19 CKYCEKVYVSLGALKMHIRTHT--LPCKCHLCGKAFSRPWLLQGHIRTHTGEKPF 71
Score = 37.9 bits (84), Expect = 3e-05
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 310 CEVCNKGFGLMRNLRSHMKLHAEEKPYVCEVCKKGF 203
C +C K F L+ H++ H EKP+ C+ C + F
Sbjct: 45 CHLCGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAF 80
Score = 27.1 bits (57), Expect = 0.054
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -1
Query: 241 EKPYVCEVCKKGFIRNSDMKSHLKIHT 161
+K + C+ C+K ++ +K H++ HT
Sbjct: 14 KKSFSCKYCEKVYVSLGALKMHIRTHT 40
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 36.3 bits (80), Expect = 9e-05
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 274 NLRSHMKLHAEEKPYVCEVCKKGFIRNSDMKSHLKIHT 161
+L H++ H KP+ CE C + S + SHLK H+
Sbjct: 3 HLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHS 40
Score = 26.6 bits (56), Expect = 0.071
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = -1
Query: 310 CEVCNKGFGLMRNLRSHMKLHAEEKPYVCEVCKKGFIRNSDMKSHLK 170
CE C+ L SH+K H+ Y C C +K HL+
Sbjct: 19 CEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCHSLKLHLR 65
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 35.9 bits (79), Expect = 1e-04
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = -1
Query: 310 CEVCNKGFGLMRNLRSHMK-LHAE-EKPYVCEVCKKGFIRNSDMKSHLKIHTRE 155
CE CNK + LR H++ +H K +C +CK+ + + +++H I+ R+
Sbjct: 5 CEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYHRQ 58
Score = 23.8 bits (49), Expect = 0.50
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = -1
Query: 313 ICEVCNKGFGLMRNLRSHMKLH 248
IC +C + + + +LR+H ++
Sbjct: 34 ICNICKRVYSSLNSLRNHKSIY 55
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 32.3 bits (70), Expect = 0.001
Identities = 13/56 (23%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -1
Query: 310 CEVCNKGFGLMRNLRSHMK-LHAE-EKPYVCEVCKKGFIRNSDMKSHLKIHTREKP 149
C++C K +L+ H+ HAE ++ Y C +C++ + + + +H+ + + +P
Sbjct: 8 CQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYHKSRP 63
Score = 20.6 bits (41), Expect = 4.7
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = -1
Query: 241 EKPYVCEVCKKGFIRNSDMKSHL 173
+K + C++C K + +K H+
Sbjct: 3 KKLFTCQLCGKVLCSKASLKRHV 25
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 31.1 bits (67), Expect = 0.003
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -1
Query: 310 CEVCNKGFGLMRNLRSHMKLHAEEKP--YVCEVCKKGFIRNSDMKSHLKIHTR 158
C C + F +L+ H + E+ YVCE C + + + + +H + R
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQHR 60
Score = 23.0 bits (47), Expect = 0.87
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -1
Query: 313 ICEVCNKGFGLMRNLRSHMKL-HAEEKPYVCEVCKKGFIRN 194
+CE CN+ + +L +H L H + + K I+N
Sbjct: 37 VCEFCNRRYRTKNSLTTHKSLQHRGSSGMLKRLLKTTAIKN 77
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 28.3 bits (60), Expect = 0.023
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -1
Query: 310 CEVCNKGFGLMRNLRSHMKL-HAEE-KPYVCEVCKKGFIRNSDMKSHLKI-HTREK 152
C+VC K L+ H + H + VC +C K F + + +H I H R+K
Sbjct: 374 CDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHKSIYHRRQK 429
Score = 20.2 bits (40), Expect = 6.2
Identities = 7/19 (36%), Positives = 9/19 (47%)
Frame = -1
Query: 232 YVCEVCKKGFIRNSDMKSH 176
Y C+VC K +K H
Sbjct: 372 YTCDVCGKTLSTKLTLKRH 390
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 19.8 bits (39), Expect = 8.1
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 212 LAYFTYIRFFF 244
+AYF ++ FFF
Sbjct: 472 VAYFMFLTFFF 482
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 19.8 bits (39), Expect = 8.1
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 212 LAYFTYIRFFF 244
+AYF ++ FFF
Sbjct: 458 VAYFMFLTFFF 468
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 19.8 bits (39), Expect = 8.1
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 212 LAYFTYIRFFF 244
+AYF ++ FFF
Sbjct: 492 VAYFMFLTFFF 502
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 19.8 bits (39), Expect = 8.1
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 212 LAYFTYIRFFF 244
+AYF ++ FFF
Sbjct: 441 VAYFMFLTFFF 451
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding
protein ASP5 protein.
Length = 143
Score = 19.8 bits (39), Expect = 8.1
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -1
Query: 70 NDHDLQC 50
+DHDLQC
Sbjct: 61 DDHDLQC 67
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,219
Number of Sequences: 438
Number of extensions: 2069
Number of successful extensions: 32
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6719922
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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