Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11o17
(814 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 28 0.089
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 25 0.83
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 25 0.83
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 24 1.5
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 3.4
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 3.4
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 3.4
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 23 4.4
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 23 4.4
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 22 5.9
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 7.8
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 7.8
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 28.3 bits (60), Expect = 0.089
Identities = 9/34 (26%), Positives = 22/34 (64%)
Frame = -3
Query: 170 ITTLCSSVWPYILPSMLLWRTKQLCIVQDTIYKE 69
+T +C + W +I+ ++LLW ++ ++ +I+ E
Sbjct: 388 LTVVCLAFWSFIVSTILLWFINKIIPIRMSIHDE 421
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 25.0 bits (52), Expect = 0.83
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 634 DDSYHKLPSYYARLASVLLSTFGENLTRRFVNH 536
DDS+H+L S+ S +S ENLT + V++
Sbjct: 218 DDSFHRLSSHTLNHNSDKMSDQQENLTLKEVDN 250
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.0 bits (52), Expect = 0.83
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1
Query: 814 TGMAKKTINTKNNWPIPYLNCYHYS 740
+ ++ KTI+ NN+ Y N Y+Y+
Sbjct: 83 SSLSNKTIHNNNNYKYNYNNKYNYN 107
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 430 YFVSVAKHHQESLLQSKRDLGL 495
YF+S A+HH + QS ++G+
Sbjct: 768 YFLSRARHHDDLYSQSYAEVGV 789
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.0 bits (47), Expect = 3.4
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -1
Query: 814 TGMAKKTINTKNNWPIPYLNCYHYSTVQKLF 722
+ ++ KTI+ NN+ Y N + + +KL+
Sbjct: 83 SSLSNKTIHNNNNYKYNYNNNNYNNNCKKLY 113
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.0 bits (47), Expect = 3.4
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -1
Query: 814 TGMAKKTINTKNNWPIPYLNCYHYSTVQKLF 722
+ ++ KTI+ NN+ Y N + + +KL+
Sbjct: 83 SSLSNKTIHNNNNYKYNYNNNNYNNNCKKLY 113
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.0 bits (47), Expect = 3.4
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -1
Query: 814 TGMAKKTINTKNNWPIPYLNCYHYSTVQKLF 722
+ ++ KTI+ NN+ Y N + + +KL+
Sbjct: 83 SSLSNKTIHNNNNYKYNYNNNNYNNNCKKLY 113
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 22.6 bits (46), Expect = 4.4
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 172 FPPSMQHMSFRYPLHWEFLLIG 237
FP +QH++ R+ ++ FL +G
Sbjct: 392 FPDEVQHLARRFLNNYLFLAVG 413
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 22.6 bits (46), Expect = 4.4
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -3
Query: 272 WTKCLLSEKTFGP 234
W KC+LS +++ P
Sbjct: 111 WDKCILSSESYNP 123
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 22.2 bits (45), Expect = 5.9
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2
Query: 186 HAWRKYYNLVFF 151
H WR+ YN+V F
Sbjct: 382 HRWRQIYNMVRF 393
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/31 (25%), Positives = 18/31 (58%)
Frame = -1
Query: 814 TGMAKKTINTKNNWPIPYLNCYHYSTVQKLF 722
+ ++ +TI+ NN+ Y N + + +KL+
Sbjct: 83 SSLSNRTIHNNNNYKYNYNNNNYNNNCKKLY 113
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.8 bits (44), Expect = 7.8
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +1
Query: 244 VFSLSKHFVHSIQMHAVMLCSLVNLNEHMKQ 336
V+ L H VH HA++ S H K+
Sbjct: 273 VYHLDNHHVHHANHHAILGHSGFLCERHQKR 303
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,301
Number of Sequences: 438
Number of extensions: 5020
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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