Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11o14
(520 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07548-1|AAA02852.1| 408|Homo sapiens aminoacylase-1 protein. 148 1e-35
D16307-1|BAA03814.1| 408|Homo sapiens 45kDa protein protein. 148 1e-35
D14524-1|BAA03397.1| 408|Homo sapiens aminoacylase-1 protein. 148 1e-35
BC014112-1|AAH14112.1| 408|Homo sapiens aminoacylase 1 protein. 148 1e-35
BC003023-1|AAH03023.1| 408|Homo sapiens aminoacylase 1 protein. 148 1e-35
BC000545-1|AAH00545.1| 408|Homo sapiens aminoacylase 1 protein. 148 1e-35
BC063477-1|AAH63477.1| 502|Homo sapiens hypothetical protein FL... 32 1.0
BC125099-1|AAI25100.1| 781|Homo sapiens zinc finger protein 616... 30 5.6
BC033199-1|AAH33199.1| 781|Homo sapiens zinc finger protein 616... 30 5.6
BC039170-1|AAH39170.1| 502|Homo sapiens hypothetical protein FL... 29 7.4
>L07548-1|AAA02852.1| 408|Homo sapiens aminoacylase-1 protein.
Length = 408
Score = 148 bits (358), Expect = 1e-35
Identities = 67/162 (41%), Positives = 103/162 (63%), Gaps = 2/162 (1%)
Frame = -3
Query: 485 KTNTHLNIYNTVSTNLFHIISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKWCT 306
++N HL + S NL + +GG+ NV+P +A+FD R+A +VD K FE +Q WC
Sbjct: 238 QSNPHLKEGSVTSVNLTKL--EGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQ 295
Query: 305 EAGRGVTYEFEQK--DPYTTPTQLDDANIYWKAFKQTAEELGMSIKPQTFTGGTDSRYLR 132
AG GVT EF QK P TPT DD+N +W AF + +++ ++++P+ TD+RY+R
Sbjct: 296 AAGEGVTLEFAQKWMHPQVTPT--DDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIR 353
Query: 131 ELGIPALGFSPIHNTTPALHEHNEHLGLDVFINGIAVYQSMI 6
+G+PALGFSP++ T LH+H+E L VF+ G+ +Y ++
Sbjct: 354 AVGVPALGFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLL 395
>D16307-1|BAA03814.1| 408|Homo sapiens 45kDa protein protein.
Length = 408
Score = 148 bits (358), Expect = 1e-35
Identities = 67/162 (41%), Positives = 103/162 (63%), Gaps = 2/162 (1%)
Frame = -3
Query: 485 KTNTHLNIYNTVSTNLFHIISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKWCT 306
++N HL + S NL + +GG+ NV+P +A+FD R+A +VD K FE +Q WC
Sbjct: 238 QSNPHLKEGSVTSVNLTKL--EGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQ 295
Query: 305 EAGRGVTYEFEQK--DPYTTPTQLDDANIYWKAFKQTAEELGMSIKPQTFTGGTDSRYLR 132
AG GVT EF QK P TPT DD+N +W AF + +++ ++++P+ TD+RY+R
Sbjct: 296 AAGEGVTLEFAQKWMHPQVTPT--DDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIR 353
Query: 131 ELGIPALGFSPIHNTTPALHEHNEHLGLDVFINGIAVYQSMI 6
+G+PALGFSP++ T LH+H+E L VF+ G+ +Y ++
Sbjct: 354 AVGVPALGFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLL 395
>D14524-1|BAA03397.1| 408|Homo sapiens aminoacylase-1 protein.
Length = 408
Score = 148 bits (358), Expect = 1e-35
Identities = 67/162 (41%), Positives = 103/162 (63%), Gaps = 2/162 (1%)
Frame = -3
Query: 485 KTNTHLNIYNTVSTNLFHIISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKWCT 306
++N HL + S NL + +GG+ NV+P +A+FD R+A +VD K FE +Q WC
Sbjct: 238 QSNPHLKEGSVTSVNLTKL--EGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQ 295
Query: 305 EAGRGVTYEFEQK--DPYTTPTQLDDANIYWKAFKQTAEELGMSIKPQTFTGGTDSRYLR 132
AG GVT EF QK P TPT DD+N +W AF + +++ ++++P+ TD+RY+R
Sbjct: 296 AAGEGVTLEFAQKWMHPQVTPT--DDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIR 353
Query: 131 ELGIPALGFSPIHNTTPALHEHNEHLGLDVFINGIAVYQSMI 6
+G+PALGFSP++ T LH+H+E L VF+ G+ +Y ++
Sbjct: 354 AVGVPALGFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLL 395
>BC014112-1|AAH14112.1| 408|Homo sapiens aminoacylase 1 protein.
Length = 408
Score = 148 bits (358), Expect = 1e-35
Identities = 67/162 (41%), Positives = 103/162 (63%), Gaps = 2/162 (1%)
Frame = -3
Query: 485 KTNTHLNIYNTVSTNLFHIISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKWCT 306
++N HL + S NL + +GG+ NV+P +A+FD R+A +VD K FE +Q WC
Sbjct: 238 QSNPHLKEGSVTSVNLTKL--EGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQ 295
Query: 305 EAGRGVTYEFEQK--DPYTTPTQLDDANIYWKAFKQTAEELGMSIKPQTFTGGTDSRYLR 132
AG GVT EF QK P TPT DD+N +W AF + +++ ++++P+ TD+RY+R
Sbjct: 296 AAGEGVTLEFAQKWMHPQVTPT--DDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIR 353
Query: 131 ELGIPALGFSPIHNTTPALHEHNEHLGLDVFINGIAVYQSMI 6
+G+PALGFSP++ T LH+H+E L VF+ G+ +Y ++
Sbjct: 354 AVGVPALGFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLL 395
>BC003023-1|AAH03023.1| 408|Homo sapiens aminoacylase 1 protein.
Length = 408
Score = 148 bits (358), Expect = 1e-35
Identities = 67/162 (41%), Positives = 103/162 (63%), Gaps = 2/162 (1%)
Frame = -3
Query: 485 KTNTHLNIYNTVSTNLFHIISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKWCT 306
++N HL + S NL + +GG+ NV+P +A+FD R+A +VD K FE +Q WC
Sbjct: 238 QSNPHLKEGSVTSVNLTKL--EGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQ 295
Query: 305 EAGRGVTYEFEQK--DPYTTPTQLDDANIYWKAFKQTAEELGMSIKPQTFTGGTDSRYLR 132
AG GVT EF QK P TPT DD+N +W AF + +++ ++++P+ TD+RY+R
Sbjct: 296 AAGEGVTLEFAQKWMHPQVTPT--DDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIR 353
Query: 131 ELGIPALGFSPIHNTTPALHEHNEHLGLDVFINGIAVYQSMI 6
+G+PALGFSP++ T LH+H+E L VF+ G+ +Y ++
Sbjct: 354 AVGVPALGFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLL 395
>BC000545-1|AAH00545.1| 408|Homo sapiens aminoacylase 1 protein.
Length = 408
Score = 148 bits (358), Expect = 1e-35
Identities = 67/162 (41%), Positives = 103/162 (63%), Gaps = 2/162 (1%)
Frame = -3
Query: 485 KTNTHLNIYNTVSTNLFHIISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKWCT 306
++N HL + S NL + +GG+ NV+P +A+FD R+A +VD K FE +Q WC
Sbjct: 238 QSNPHLKEGSVTSVNLTKL--EGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQ 295
Query: 305 EAGRGVTYEFEQK--DPYTTPTQLDDANIYWKAFKQTAEELGMSIKPQTFTGGTDSRYLR 132
AG GVT EF QK P TPT DD+N +W AF + +++ ++++P+ TD+RY+R
Sbjct: 296 AAGEGVTLEFAQKWMHPQVTPT--DDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIR 353
Query: 131 ELGIPALGFSPIHNTTPALHEHNEHLGLDVFINGIAVYQSMI 6
+G+PALGFSP++ T LH+H+E L VF+ G+ +Y ++
Sbjct: 354 AVGVPALGFSPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLL 395
>BC063477-1|AAH63477.1| 502|Homo sapiens hypothetical protein
FLJ32569 protein.
Length = 502
Score = 32.3 bits (70), Expect = 1.0
Identities = 34/157 (21%), Positives = 62/157 (39%), Gaps = 6/157 (3%)
Frame = -3
Query: 491 DRKTNTHLNIYNTVSTNLFHIISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKW 312
+R T+ I T + +F + G++ NV+P A + RI ++E + +
Sbjct: 325 ERNPLTNAIIRTTTALTIF----KAGVKFNVIPPVAQATVNFRIHPGQTVQEVLELTKNI 380
Query: 311 CTEAGRGVTYEFEQKDPYTTPTQLDDANIYWKAFKQTAEELGMSIK---PQTFTGGTDSR 141
+ R + DP DD + ++ +QT + + + P T G TDSR
Sbjct: 381 VAD-NRVQFHVLSAFDPLPVSPS-DDKALGYQLLRQTVQSVFPEVNITAPVTSIGNTDSR 438
Query: 140 YLRELGIPALGFSPIH---NTTPALHEHNEHLGLDVF 39
+ L F PI+ +H NE + + +
Sbjct: 439 FFTNLTTGIYRFYPIYIQPEDFKRIHGVNEKISVQAY 475
>BC125099-1|AAI25100.1| 781|Homo sapiens zinc finger protein 616
protein.
Length = 781
Score = 29.9 bits (64), Expect = 5.6
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -3
Query: 425 SQGGIQNNVVPEQFTANFDLRIA 357
SQG ++NN + Q T+NF+ R+A
Sbjct: 127 SQGDVENNHIENQLTSNFESRLA 149
>BC033199-1|AAH33199.1| 781|Homo sapiens zinc finger protein 616
protein.
Length = 781
Score = 29.9 bits (64), Expect = 5.6
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -3
Query: 425 SQGGIQNNVVPEQFTANFDLRIA 357
SQG ++NN + Q T+NF+ R+A
Sbjct: 127 SQGDVENNHIENQLTSNFESRLA 149
>BC039170-1|AAH39170.1| 502|Homo sapiens hypothetical protein
FLJ32569 protein.
Length = 502
Score = 29.5 bits (63), Expect = 7.4
Identities = 33/157 (21%), Positives = 61/157 (38%), Gaps = 6/157 (3%)
Frame = -3
Query: 491 DRKTNTHLNIYNTVSTNLFHIISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKW 312
+R T+ I T + +F + ++ NV+P A + RI ++E + +
Sbjct: 325 ERNPLTNAIIRTTTALTIF----KARVKFNVIPPVAQATVNFRIHPGQTVQEVLELTKNT 380
Query: 311 CTEAGRGVTYEFEQKDPYTTPTQLDDANIYWKAFKQTAEELGMSIK---PQTFTGGTDSR 141
+ R + DP DD + ++ +QT + + + P T G TDSR
Sbjct: 381 VAD-NRVQFHVLSAFDPLPVSPS-DDKALGYQLLRQTVQSVFPEVNITAPVTSIGNTDSR 438
Query: 140 YLRELGIPALGFSPIH---NTTPALHEHNEHLGLDVF 39
+ L F PI+ +H NE + + +
Sbjct: 439 FFTNLTTGIYRFYPIYIQPEDFKRIHGVNEKISVQAY 475
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,925,986
Number of Sequences: 237096
Number of extensions: 1570556
Number of successful extensions: 3204
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3204
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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