Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11o12
(865 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 72 8e-15
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 60 3e-11
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 49 5e-08
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 46 3e-07
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 44 1e-06
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 44 1e-06
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 35 8e-04
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 24 2.1
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 23 3.6
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 23 3.6
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 23 3.6
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 4.8
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 8.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 8.4
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 71.7 bits (168), Expect = 8e-15
Identities = 50/145 (34%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Frame = -1
Query: 532 HRDIKCENLLMDH---GLNIKLSDFGFARGHMKPKNGVFALSETFCGSYAYASPEILKGV 362
HRD+K ENLL+ G +KL+DFG A F F G+ Y SPE+LK
Sbjct: 32 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFG----FAGTPGYLSPEVLKKE 87
Query: 361 PYRPQDSDVWSMGVVLYAIVYGRLPFDDTNYTQLLKQVQN---KVSFPREPKVSAECRKL 191
PY + D+W+ GV+LY ++ G PF D + +L Q++ P V+ E + L
Sbjct: 88 PYG-KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKTGSYDYPSPEWDTVTPEAKNL 146
Query: 190 ITRILA--PLKMRVKIPQILADPWL 122
I ++L P K R+ + L PW+
Sbjct: 147 INQMLTVNPSK-RITASEALKHPWI 170
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 60.1 bits (139), Expect = 3e-11
Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Frame = -1
Query: 556 FLQAIETTHRDIKCENLLMDHGLNIKLSDFGFARGHMKPKNGVFALSETFCGSYAYASPE 377
+L + +RD+K ENLL+D +KL DFGFA+ + +G + TFCG+ Y +PE
Sbjct: 481 YLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAK---RLDHG--RKTWTFCGTPEYVAPE 535
Query: 376 ILKGVPYRPQDSDVWSMGVVLYAIVYGRLPFDD----TNYTQLLKQVQNKVSFPR 224
++ + +D WS+GV+++ ++ G PF Y +LK + + + FPR
Sbjct: 536 VILNKGH-DISADYWSLGVLMFELLTGTPPFTGGDPMKTYNIILKGI-DAIEFPR 588
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 49.2 bits (112), Expect = 5e-08
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = -1
Query: 562 IRFLQAIETTHRDIKCENLLMDHGLNIKLSDFGFARGHMKPKNGVFALSETFCGSYAYAS 383
+++L + HRD+ N+L++ L K++DFG +R G + + +
Sbjct: 748 MQYLAEMNYVHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYTTRGGKI-PVRWTA 806
Query: 382 PEILKGVPYRPQDSDVWSMGVVLYAIV-YGRLPFDDTNYTQLLKQVQNKVSFP 227
PE + + SDVWSMG+V + ++ YG P+ + + ++K ++ P
Sbjct: 807 PEAIAFRKF-TSASDVWSMGIVCWEVMSYGERPYWNWSNQDVIKSIEKGYRLP 858
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 46.4 bits (105), Expect = 3e-07
Identities = 27/93 (29%), Positives = 49/93 (52%)
Frame = -1
Query: 562 IRFLQAIETTHRDIKCENLLMDHGLNIKLSDFGFARGHMKPKNGVFALSETFCGSYAYAS 383
++F H D+K +N+LM KL+DFG + P + F G+ Y +
Sbjct: 168 LQFCHNAGIVHADVKPKNILMSKNGQPKLTDFGSSVLIGAPNE-----IDKFYGTPGYTA 222
Query: 382 PEILKGVPYRPQDSDVWSMGVVLYAIVYGRLPF 284
PE++K P +D++S+G+V + +++ +LPF
Sbjct: 223 PEVIKQNRPTPA-ADIYSLGIVAWQMLFRKLPF 254
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 44.4 bits (100), Expect = 1e-06
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Frame = -1
Query: 562 IRFLQAIETTHRDIKCENLLMDHGLNIKLSDFGFARGHMKPKNGVFALSETFCGSYAYAS 383
IR+L + HRD+K +N+L+D KL+DFGF + + + G+ + +
Sbjct: 710 IRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCITEV-------MMLGSIVGTPVHMA 762
Query: 382 PEILKGVPYRPQDSDVWSMGVVLYAIVYG--RLPF 284
PE+L G + DV++ G++ + + G RLP+
Sbjct: 763 PELLSG--HYDSSVDVYAFGILFWYLCAGHVRLPY 795
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 44.4 bits (100), Expect = 1e-06
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Frame = -1
Query: 562 IRFLQAIETTHRDIKCENLLMDHGLNIKLSDFGFARGHMKPKNGVFALSETFCGSYAYAS 383
IR+L + HRD+K +N+L+D KL+DFGF + + + G+ + +
Sbjct: 748 IRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCITEV-------MMLGSIVGTPVHMA 800
Query: 382 PEILKGVPYRPQDSDVWSMGVVLYAIVYG--RLPF 284
PE+L G + DV++ G++ + + G RLP+
Sbjct: 801 PELLSG--HYDSSVDVYAFGILFWYLCAGHVRLPY 833
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 35.1 bits (77), Expect = 8e-04
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = -1
Query: 556 FLQAIETTHRDIKCENLLMDHGLNIKLSDFGFARGHMKPKNGVFALSETFCGS 398
FL +RD+K +N+L+D +IK++DFG + + ++TFCG+
Sbjct: 100 FLHGRGIVYRDLKLDNVLLDQDGHIKIADFGMCKEGISGDK----TTKTFCGT 148
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.8 bits (49), Expect = 2.1
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -1
Query: 526 DIKCENLLMD-HGLNIKLSDFGFA 458
D+ +MD H ++KLSDFGF+
Sbjct: 1396 DVIVNTPIMDAHFKDVKLSDFGFS 1419
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 742 MLGRTIGSGSYATVKVASSDRHN 674
MLG G GS T+ + + DR+N
Sbjct: 130 MLGSLFGCGSIWTMTMIAFDRYN 152
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 742 MLGRTIGSGSYATVKVASSDRHN 674
MLG G GS T+ + + DR+N
Sbjct: 96 MLGSLFGCGSIWTMTMIAFDRYN 118
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 742 MLGRTIGSGSYATVKVASSDRHN 674
MLG G GS T+ + + DR+N
Sbjct: 6 MLGSLFGCGSIWTMTMIAFDRYN 28
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -1
Query: 676 NCQVAIKIISKFQAPGDYLKKFLP 605
+C ++ K GDY++++LP
Sbjct: 428 HCYCPVRFGRKADPNGDYIRRYLP 451
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.8 bits (44), Expect = 8.4
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +2
Query: 650 DYFNSNLTIMSVARGHLNSCIGTGPNCSAKHVTVAF 757
D N+ + + + NSC+G+ +KH T F
Sbjct: 360 DSMNAVIRNFNESENRRNSCLGSTETYYSKHNTQQF 395
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 8.4
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +1
Query: 763 PSVSFQFWLPHRYVPXP 813
P F FW P ++P P
Sbjct: 1157 PFTPFNFWNPPPFMPSP 1173
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,368
Number of Sequences: 438
Number of extensions: 5365
Number of successful extensions: 40
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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