Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte11o08
         (121 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    22   2.2  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    20   9.0  

>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 4   LIKSKQVIFLFNTFVLQSEQD*LDFMRF 87
           ++   Q + L +TF LQS  D +D  RF
Sbjct: 202 IVDYDQTLQLNHTFTLQSLIDGIDLTRF 229


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 19  QVIFLFNTFVLQSEQD*LDFMRFV 90
           QV+ LFN F+  SE     FM+ V
Sbjct: 314 QVLTLFNEFINWSEFHQSPFMQAV 337


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,955
Number of Sequences: 2352
Number of extensions: 1033
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 20
effective length of database: 516,939
effective search space used:  9821841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)