Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11n16
(830 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001883-1|AAH01883.1| 700|Homo sapiens nucleolar and coiled-bo... 36 0.14
AY820769-1|AAV67777.1| 700|Homo sapiens HCV NS5A trans-regulate... 36 0.14
AL500527-7|CAH72220.1| 699|Homo sapiens nucleolar and coiled-bo... 36 0.14
Z34289-1|CAA84063.1| 699|Homo sapiens nucleolar phosphoprotein ... 34 0.55
CR457060-1|CAG33341.1| 610|Homo sapiens DDX18 protein. 32 2.2
BC024739-1|AAH24739.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 32 2.2
BC003360-1|AAH03360.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 32 2.2
BC001238-1|AAH01238.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 32 2.2
BC117364-1|AAI17365.1| 559|Homo sapiens phosphatase and actin r... 31 3.9
BC117362-1|AAI17363.1| 559|Homo sapiens phosphatase and actin r... 31 3.9
BC108303-1|AAI08304.1| 559|Homo sapiens phosphatase and actin r... 31 3.9
AL357503-5|CAI23229.1| 559|Homo sapiens phosphatase and actin r... 31 3.9
AL357503-3|CAI23228.2| 518|Homo sapiens phosphatase and actin r... 31 3.9
AL357503-1|CAI23227.1| 556|Homo sapiens phosphatase and actin r... 31 3.9
AL121908-3|CAI22518.1| 559|Homo sapiens phosphatase and actin r... 31 3.9
AL121908-1|CAI22517.1| 556|Homo sapiens phosphatase and actin r... 31 3.9
AJ617581-1|CAF04087.1| 518|Homo sapiens scapinin 1C protein. 31 3.9
AJ311122-1|CAC67489.2| 518|Homo sapiens scapinin 1B protein. 31 3.9
AB098521-1|BAC82348.1| 518|Homo sapiens scapinin protein. 31 3.9
X98743-1|CAA67295.1| 610|Homo sapiens RNA helicase protein. 31 5.1
DQ149929-1|ABA06536.1| 916|Homo sapiens serine protease inhibit... 31 5.1
DQ149928-1|ABA06535.1| 1094|Homo sapiens serine protease inhibit... 31 5.1
DQ149927-1|ABA06534.1| 1064|Homo sapiens serine protease inhibit... 31 5.1
BC146781-1|AAI46782.1| 1210|Homo sapiens PER3 protein protein. 31 5.1
AY142115-1|AAN34940.1| 405|Homo sapiens PKNOX1B protein. 31 5.1
AK001467-1|BAA91709.1| 670|Homo sapiens protein ( Homo sapiens ... 31 5.1
AJ391230-1|CAB96877.1| 1064|Homo sapiens serine protease inhibit... 31 5.1
AJ228139-1|CAB40839.1| 1064|Homo sapiens LEKTI precursor protein. 31 5.1
AB047686-1|BAB32925.2| 1233|Homo sapiens period (Drosophila) hom... 31 5.1
AB002348-1|BAA20807.3| 1062|Homo sapiens KIAA0350 protein protein. 31 5.1
BX538107-1|CAD98020.1| 264|Homo sapiens hypothetical protein pr... 31 6.8
BC072455-1|AAH72455.1| 263|Homo sapiens C11orf57 protein protein. 31 6.8
BC048133-1|AAH48133.1| 264|Homo sapiens C11orf57 protein protein. 31 6.8
BC030546-1|AAH30546.2| 264|Homo sapiens chromosome 11 open read... 31 6.8
BC005403-1|AAH05403.2| 264|Homo sapiens chromosome 11 open read... 31 6.8
AK125340-1|BAC86137.1| 292|Homo sapiens protein ( Homo sapiens ... 31 6.8
AK001588-1|BAA91774.1| 148|Homo sapiens protein ( Homo sapiens ... 31 6.8
Z99128-3|CAI20544.1| 654|Homo sapiens SFRS protein kinase 1 pro... 30 8.9
Z99128-2|CAI20545.1| 654|Homo sapiens SFRS protein kinase 1 pro... 30 8.9
U09564-1|AAA20530.1| 655|Homo sapiens serine kinase protein. 30 8.9
BC063688-1|AAH63688.2| 385|Homo sapiens family with sequence si... 30 8.9
BC046124-1|AAH46124.2| 805|Homo sapiens RSF1 protein protein. 30 8.9
BC038292-1|AAH38292.1| 655|Homo sapiens SFRS protein kinase 1 p... 30 8.9
BC011716-1|AAH11716.2| 301|Homo sapiens FAM54A protein protein. 30 8.9
AL138828-1|CAI95284.1| 379|Homo sapiens family with sequence si... 30 8.9
AL121713-2|CAI17908.1| 379|Homo sapiens family with sequence si... 30 8.9
AK125758-1|BAC86277.1| 342|Homo sapiens protein ( Homo sapiens ... 30 8.9
AK001268-1|BAA91591.1| 572|Homo sapiens protein ( Homo sapiens ... 30 8.9
AJ318054-1|CAC39299.1| 826|Homo sapiens SRPK1a protein kinase p... 30 8.9
AF380176-1|AAK57515.1| 1431|Homo sapiens HBV pX associated prote... 30 8.9
AF227948-1|AAF61709.2| 1189|Homo sapiens HBV pX associated prote... 30 8.9
>BC001883-1|AAH01883.1| 700|Homo sapiens nucleolar and coiled-body
phosphoprotein 1 protein.
Length = 700
Score = 36.3 bits (80), Expect = 0.14
Identities = 41/161 (25%), Positives = 64/161 (39%), Gaps = 6/161 (3%)
Frame = -2
Query: 784 STSEESLSNDDSPVRRKKNAKNKTV--QNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQ 611
S+S S S+DDS + KTV + V K+ PT SS+ + E Q
Sbjct: 220 SSSSSSSSSDDSEEEKAAATPKKTVPKKQVVAKAPVKAATTPTRKSSSSEDSSSDEEEEQ 279
Query: 610 ASVYSDYDLPKNTLHVIGSNPGEPKMSY-TDPPKKLSKTMKKFLRNMD-KHKCDQYMKSS 437
+ P +++ + P PK S T PPKK + + + D + D +
Sbjct: 280 KKPMKNKPGPYSSVPPPSAPP--PKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSEEE 337
Query: 436 EKAVSKLTTMRGILK--DGRCGPECTGDSSVQGVEEFNDEA 320
+K +K + K + E + DSS E +DEA
Sbjct: 338 KKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSE-DDEA 377
>AY820769-1|AAV67777.1| 700|Homo sapiens HCV NS5A trans-regulated
protein 13 protein.
Length = 700
Score = 36.3 bits (80), Expect = 0.14
Identities = 41/161 (25%), Positives = 64/161 (39%), Gaps = 6/161 (3%)
Frame = -2
Query: 784 STSEESLSNDDSPVRRKKNAKNKTV--QNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQ 611
S+S S S+DDS + KTV + V K+ PT SS+ + E Q
Sbjct: 220 SSSSSSSSSDDSEEEKAAATPKKTVPKKQVVAKAPVKAATTPTRKSSSSEDSSSDEEEEQ 279
Query: 610 ASVYSDYDLPKNTLHVIGSNPGEPKMSY-TDPPKKLSKTMKKFLRNMD-KHKCDQYMKSS 437
+ P +++ + P PK S T PPKK + + + D + D +
Sbjct: 280 KKPMKNKPGPYSSVPPPSAPP--PKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSEEE 337
Query: 436 EKAVSKLTTMRGILK--DGRCGPECTGDSSVQGVEEFNDEA 320
+K +K + K + E + DSS E +DEA
Sbjct: 338 KKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSE-DDEA 377
>AL500527-7|CAH72220.1| 699|Homo sapiens nucleolar and coiled-body
phosphoprotein 1 protein.
Length = 699
Score = 36.3 bits (80), Expect = 0.14
Identities = 41/161 (25%), Positives = 64/161 (39%), Gaps = 6/161 (3%)
Frame = -2
Query: 784 STSEESLSNDDSPVRRKKNAKNKTV--QNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQ 611
S+S S S+DDS + KTV + V K+ PT SS+ + E Q
Sbjct: 219 SSSSSSSSSDDSEEEKAAATPKKTVPKKQVVAKAPVKAATTPTRKSSSSEDSSSDEEEEQ 278
Query: 610 ASVYSDYDLPKNTLHVIGSNPGEPKMSY-TDPPKKLSKTMKKFLRNMD-KHKCDQYMKSS 437
+ P +++ + P PK S T PPKK + + + D + D +
Sbjct: 279 KKPMKNKPGPYSSVPPPSAPP--PKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSEEE 336
Query: 436 EKAVSKLTTMRGILK--DGRCGPECTGDSSVQGVEEFNDEA 320
+K +K + K + E + DSS E +DEA
Sbjct: 337 KKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSE-DDEA 376
>Z34289-1|CAA84063.1| 699|Homo sapiens nucleolar phosphoprotein
p130 protein.
Length = 699
Score = 34.3 bits (75), Expect = 0.55
Identities = 41/161 (25%), Positives = 62/161 (38%), Gaps = 6/161 (3%)
Frame = -2
Query: 784 STSEESLSNDDSPVRRKKNAKNKTV--QNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQ 611
S+S S S+DDS + KTV + V K+ PT SS+ + E Q
Sbjct: 219 SSSSSSSSSDDSEEEKAAATPKKTVPKKQVVAKAPVKAATTPTRKSSSSEDSSSDEEEEQ 278
Query: 610 ASVYSDYDLPKNTLHVIGSNPGEPKMSY-TDPPKKLSKTMKKFLRNMD-KHKCDQYMKSS 437
+ P + + P PK S T PPKK + + + D + D +
Sbjct: 279 KKPMKNKPGPYSYAPPPSAPP--PKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSEEE 336
Query: 436 EKAVSKLTTMRGILK--DGRCGPECTGDSSVQGVEEFNDEA 320
+K +K + K + E + DSS E +DEA
Sbjct: 337 KKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSE-DDEA 376
>CR457060-1|CAG33341.1| 610|Homo sapiens DDX18 protein.
Length = 610
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = -2
Query: 784 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQAS 605
S E ++ + +S ++KK K K V + +PD T S+ + KET
Sbjct: 34 SNGEAAMQSSNSESKKKKKKKRKMVNDAEPDTKKAKTENKGKSEEESAETTKETENNVEK 93
Query: 604 VYSDYD 587
+D D
Sbjct: 94 PDNDED 99
>BC024739-1|AAH24739.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18 protein.
Length = 670
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = -2
Query: 784 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQAS 605
S E ++ + +S ++KK K K V + +PD T S+ + KET
Sbjct: 94 SNGEAAMQSSNSESKKKKKKKRKMVNDAEPDTKKAKTENKGKSEEESAETTKETENNVEK 153
Query: 604 VYSDYD 587
+D D
Sbjct: 154 PDNDED 159
>BC003360-1|AAH03360.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18 protein.
Length = 670
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = -2
Query: 784 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQAS 605
S E ++ + +S ++KK K K V + +PD T S+ + KET
Sbjct: 94 SNGEAAMQSSNSESKKKKKKKRKMVNDAEPDTKKAKTENKGKSEEESAETTKETENNVEK 153
Query: 604 VYSDYD 587
+D D
Sbjct: 154 PDNDED 159
>BC001238-1|AAH01238.1| 670|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18 protein.
Length = 670
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = -2
Query: 784 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQAS 605
S E ++ + +S ++KK K K V + +PD T S+ + KET
Sbjct: 94 SNGEAAMQSSNSESKKKKKKKRKMVNDAEPDTKKAKTENKGKSEEESAETTKETENNVEK 153
Query: 604 VYSDYD 587
+D D
Sbjct: 154 PDNDED 159
>BC117364-1|AAI17365.1| 559|Homo sapiens phosphatase and actin
regulator 3 protein.
Length = 559
Score = 31.5 bits (68), Expect = 3.9
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = -2
Query: 694 DDAAKSTYVPTNSKSSTGSRPKETPE-RQASVYSD-YDLPKNTLH-VIGSNPGEPKMSYT 524
DDAAK + ++ GS T E QA +D D P L +G P P + T
Sbjct: 178 DDAAKMPSASSGEEADAGSLLPTTNELSQALAGADSLDSPPRPLERSVGQLPSPPLLP-T 236
Query: 523 DPPKKLSKTMKKFLRNMDKHKCDQYMKSSEKAV-SKLTTMRG 401
PPK SKT K + MKS++ ++ +L+T G
Sbjct: 237 PPPKASSKTTKNVTGQATLFQASS-MKSADPSLRGQLSTPTG 277
>BC117362-1|AAI17363.1| 559|Homo sapiens phosphatase and actin
regulator 3 protein.
Length = 559
Score = 31.5 bits (68), Expect = 3.9
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = -2
Query: 694 DDAAKSTYVPTNSKSSTGSRPKETPE-RQASVYSD-YDLPKNTLH-VIGSNPGEPKMSYT 524
DDAAK + ++ GS T E QA +D D P L +G P P + T
Sbjct: 178 DDAAKMPSASSGEEADAGSLLPTTNELSQALAGADSLDSPPRPLERSVGQLPSPPLLP-T 236
Query: 523 DPPKKLSKTMKKFLRNMDKHKCDQYMKSSEKAV-SKLTTMRG 401
PPK SKT K + MKS++ ++ +L+T G
Sbjct: 237 PPPKASSKTTKNVTGQATLFQASS-MKSADPSLRGQLSTPTG 277
>BC108303-1|AAI08304.1| 559|Homo sapiens phosphatase and actin
regulator 3 protein.
Length = 559
Score = 31.5 bits (68), Expect = 3.9
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = -2
Query: 694 DDAAKSTYVPTNSKSSTGSRPKETPE-RQASVYSD-YDLPKNTLH-VIGSNPGEPKMSYT 524
DDAAK + ++ GS T E QA +D D P L +G P P + T
Sbjct: 178 DDAAKMPSASSGEEADAGSLLPTTNELSQALAGADSLDSPPRPLERSVGQLPSPPLLP-T 236
Query: 523 DPPKKLSKTMKKFLRNMDKHKCDQYMKSSEKAV-SKLTTMRG 401
PPK SKT K + MKS++ ++ +L+T G
Sbjct: 237 PPPKASSKTTKNVTGQATLFQASS-MKSADPSLRGQLSTPTG 277
>AL357503-5|CAI23229.1| 559|Homo sapiens phosphatase and actin
regulator 3 protein.
Length = 559
Score = 31.5 bits (68), Expect = 3.9
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = -2
Query: 694 DDAAKSTYVPTNSKSSTGSRPKETPE-RQASVYSD-YDLPKNTLH-VIGSNPGEPKMSYT 524
DDAAK + ++ GS T E QA +D D P L +G P P + T
Sbjct: 178 DDAAKMPSASSGEEADAGSLLPTTNELSQALAGADSLDSPPRPLERSVGQLPSPPLLP-T 236
Query: 523 DPPKKLSKTMKKFLRNMDKHKCDQYMKSSEKAV-SKLTTMRG 401
PPK SKT K + MKS++ ++ +L+T G
Sbjct: 237 PPPKASSKTTKNVTGQATLFQASS-MKSADPSLRGQLSTPTG 277
>AL357503-3|CAI23228.2| 518|Homo sapiens phosphatase and actin
regulator 3 protein.
Length = 518
Score = 31.5 bits (68), Expect = 3.9
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = -2
Query: 694 DDAAKSTYVPTNSKSSTGSRPKETPE-RQASVYSD-YDLPKNTLH-VIGSNPGEPKMSYT 524
DDAAK + ++ GS T E QA +D D P L +G P P + T
Sbjct: 137 DDAAKMPSASSGEEADAGSLLPTTNELSQALAGADSLDSPPRPLERSVGQLPSPPLLP-T 195
Query: 523 DPPKKLSKTMKKFLRNMDKHKCDQYMKSSEKAV-SKLTTMRG 401
PPK SKT K + MKS++ ++ +L+T G
Sbjct: 196 PPPKASSKTTKNVTGQATLFQASS-MKSADPSLRGQLSTPTG 236
>AL357503-1|CAI23227.1| 556|Homo sapiens phosphatase and actin
regulator 3 protein.
Length = 556
Score = 31.5 bits (68), Expect = 3.9
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = -2
Query: 694 DDAAKSTYVPTNSKSSTGSRPKETPE-RQASVYSD-YDLPKNTLH-VIGSNPGEPKMSYT 524
DDAAK + ++ GS T E QA +D D P L +G P P + T
Sbjct: 175 DDAAKMPSASSGEEADAGSLLPTTNELSQALAGADSLDSPPRPLERSVGQLPSPPLLP-T 233
Query: 523 DPPKKLSKTMKKFLRNMDKHKCDQYMKSSEKAV-SKLTTMRG 401
PPK SKT K + MKS++ ++ +L+T G
Sbjct: 234 PPPKASSKTTKNVTGQATLFQASS-MKSADPSLRGQLSTPTG 274
>AL121908-3|CAI22518.1| 559|Homo sapiens phosphatase and actin
regulator 3 protein.
Length = 559
Score = 31.5 bits (68), Expect = 3.9
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = -2
Query: 694 DDAAKSTYVPTNSKSSTGSRPKETPE-RQASVYSD-YDLPKNTLH-VIGSNPGEPKMSYT 524
DDAAK + ++ GS T E QA +D D P L +G P P + T
Sbjct: 178 DDAAKMPSASSGEEADAGSLLPTTNELSQALAGADSLDSPPRPLERSVGQLPSPPLLP-T 236
Query: 523 DPPKKLSKTMKKFLRNMDKHKCDQYMKSSEKAV-SKLTTMRG 401
PPK SKT K + MKS++ ++ +L+T G
Sbjct: 237 PPPKASSKTTKNVTGQATLFQASS-MKSADPSLRGQLSTPTG 277
>AL121908-1|CAI22517.1| 556|Homo sapiens phosphatase and actin
regulator 3 protein.
Length = 556
Score = 31.5 bits (68), Expect = 3.9
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = -2
Query: 694 DDAAKSTYVPTNSKSSTGSRPKETPE-RQASVYSD-YDLPKNTLH-VIGSNPGEPKMSYT 524
DDAAK + ++ GS T E QA +D D P L +G P P + T
Sbjct: 175 DDAAKMPSASSGEEADAGSLLPTTNELSQALAGADSLDSPPRPLERSVGQLPSPPLLP-T 233
Query: 523 DPPKKLSKTMKKFLRNMDKHKCDQYMKSSEKAV-SKLTTMRG 401
PPK SKT K + MKS++ ++ +L+T G
Sbjct: 234 PPPKASSKTTKNVTGQATLFQASS-MKSADPSLRGQLSTPTG 274
>AJ617581-1|CAF04087.1| 518|Homo sapiens scapinin 1C protein.
Length = 518
Score = 31.5 bits (68), Expect = 3.9
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = -2
Query: 694 DDAAKSTYVPTNSKSSTGSRPKETPE-RQASVYSD-YDLPKNTLH-VIGSNPGEPKMSYT 524
DDAAK + ++ GS T E QA +D D P L +G P P + T
Sbjct: 137 DDAAKMPSASSGEEADAGSLLPTTNELSQALAGADSLDSPPRPLERSVGQLPSPPLLP-T 195
Query: 523 DPPKKLSKTMKKFLRNMDKHKCDQYMKSSEKAV-SKLTTMRG 401
PPK SKT K + MKS++ ++ +L+T G
Sbjct: 196 PPPKASSKTTKNVTGQATLFQASS-MKSADPSLRGQLSTPTG 236
>AJ311122-1|CAC67489.2| 518|Homo sapiens scapinin 1B protein.
Length = 518
Score = 31.5 bits (68), Expect = 3.9
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = -2
Query: 694 DDAAKSTYVPTNSKSSTGSRPKETPE-RQASVYSD-YDLPKNTLH-VIGSNPGEPKMSYT 524
DDAAK + ++ GS T E QA +D D P L +G P P + T
Sbjct: 137 DDAAKMPSASSGEEADAGSLLPTTNELSQALAGADSLDSPPRPLERSVGQLPSPPLLP-T 195
Query: 523 DPPKKLSKTMKKFLRNMDKHKCDQYMKSSEKAV-SKLTTMRG 401
PPK SKT K + MKS++ ++ +L+T G
Sbjct: 196 PPPKASSKTTKNVTGQATLFQASS-MKSADPSLRGQLSTPTG 236
>AB098521-1|BAC82348.1| 518|Homo sapiens scapinin protein.
Length = 518
Score = 31.5 bits (68), Expect = 3.9
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = -2
Query: 694 DDAAKSTYVPTNSKSSTGSRPKETPE-RQASVYSD-YDLPKNTLH-VIGSNPGEPKMSYT 524
DDAAK + ++ GS T E QA +D D P L +G P P + T
Sbjct: 137 DDAAKMPSASSGEEADAGSLLPTTNELSQALAGADSLDSPPRPLERSVGQLPSPPLLP-T 195
Query: 523 DPPKKLSKTMKKFLRNMDKHKCDQYMKSSEKAV-SKLTTMRG 401
PPK SKT K + MKS++ ++ +L+T G
Sbjct: 196 PPPKASSKTTKNVTGQATLFQASS-MKSADPSLRGQLSTPTG 236
>X98743-1|CAA67295.1| 610|Homo sapiens RNA helicase protein.
Length = 610
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/66 (24%), Positives = 28/66 (42%)
Frame = -2
Query: 784 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQAS 605
+ E ++ + +S ++KK K K V + +PD T S+ + KET
Sbjct: 34 TNGEAAMQSSNSESKKKKKKKRKMVNDAEPDTKKAKTENKGKSEEESAETTKETENNVEK 93
Query: 604 VYSDYD 587
+D D
Sbjct: 94 PDNDED 99
>DQ149929-1|ABA06536.1| 916|Homo sapiens serine protease inhibitor
Kazal-type 5 short isoform protein.
Length = 916
Score = 31.1 bits (67), Expect = 5.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 738 GKRTPRTKLCKMYSQMTPRNRLTYQQTANPRQDPDQKKHQN 616
GK T +LC Y ++ +L + +P Q PD K H N
Sbjct: 358 GKATSYAELCNEYRKLVRNGKLACTRENDPIQGPDGKVHGN 398
>DQ149928-1|ABA06535.1| 1094|Homo sapiens serine protease inhibitor
Kazal-type 5 long isoform protein.
Length = 1094
Score = 31.1 bits (67), Expect = 5.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 738 GKRTPRTKLCKMYSQMTPRNRLTYQQTANPRQDPDQKKHQN 616
GK T +LC Y ++ +L + +P Q PD K H N
Sbjct: 358 GKATSYAELCNEYRKLVRNGKLACTRENDPIQGPDGKVHGN 398
>DQ149927-1|ABA06534.1| 1064|Homo sapiens serine protease inhibitor
Kazal-type 5 protein.
Length = 1064
Score = 31.1 bits (67), Expect = 5.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 738 GKRTPRTKLCKMYSQMTPRNRLTYQQTANPRQDPDQKKHQN 616
GK T +LC Y ++ +L + +P Q PD K H N
Sbjct: 358 GKATSYAELCNEYRKLVRNGKLACTRENDPIQGPDGKVHGN 398
>BC146781-1|AAI46782.1| 1210|Homo sapiens PER3 protein protein.
Length = 1210
Score = 31.1 bits (67), Expect = 5.1
Identities = 28/98 (28%), Positives = 38/98 (38%), Gaps = 4/98 (4%)
Frame = -2
Query: 775 EESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPER-QASVY 599
EE +SP R ++N +T + + T STGS P+E P AS
Sbjct: 940 EEMPRPSESPDRMRRNTCPQTEYQCVTGNNGSESSPATTGALSTGSPPRENPSHPTASAL 999
Query: 598 SDYDLP-KNTLHVIGS--NPGEPKMSYTDPPKKLSKTM 494
S P KN H S + G P M P + +M
Sbjct: 1000 STGSPPMKNPSHPTASALSTGSPPMKNPSHPTASTLSM 1037
>AY142115-1|AAN34940.1| 405|Homo sapiens PKNOX1B protein.
Length = 405
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -2
Query: 763 SNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSK----SSTGSRPK 629
S ++P +KK A+N+ VQ PD A P S+ TG RP+
Sbjct: 325 SCSETPKTKKKTAQNRPVQRFWPDSIASGVAQPPPSELTMSEGTGGRPR 373
>AK001467-1|BAA91709.1| 670|Homo sapiens protein ( Homo sapiens
cDNA FLJ10605 fis, clone NT2RP2005126, highly similar to
H.sapiens mRNA for RNA helicase. ).
Length = 670
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/66 (24%), Positives = 28/66 (42%)
Frame = -2
Query: 784 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQAS 605
+ E ++ + +S ++KK K K V + +PD T S+ + KET
Sbjct: 94 TNGEAAMQSSNSESKKKKKKKRKMVNDAEPDTKKAKTENKGKSEEESAETTKETENNVEK 153
Query: 604 VYSDYD 587
+D D
Sbjct: 154 PDNDED 159
>AJ391230-1|CAB96877.1| 1064|Homo sapiens serine protease inhibitor
Kazal type 5 protein.
Length = 1064
Score = 31.1 bits (67), Expect = 5.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 738 GKRTPRTKLCKMYSQMTPRNRLTYQQTANPRQDPDQKKHQN 616
GK T +LC Y ++ +L + +P Q PD K H N
Sbjct: 358 GKATSYAELCNEYRKLVRNGKLACTRENDPIQGPDGKVHGN 398
>AJ228139-1|CAB40839.1| 1064|Homo sapiens LEKTI precursor protein.
Length = 1064
Score = 31.1 bits (67), Expect = 5.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 738 GKRTPRTKLCKMYSQMTPRNRLTYQQTANPRQDPDQKKHQN 616
GK T +LC Y ++ +L + +P Q PD K H N
Sbjct: 358 GKATSYAELCNEYRKLVRNGKLACTRENDPIQGPDGKVHGN 398
>AB047686-1|BAB32925.2| 1233|Homo sapiens period (Drosophila) homolog
3 hPER3 protein.
Length = 1233
Score = 31.1 bits (67), Expect = 5.1
Identities = 28/98 (28%), Positives = 38/98 (38%), Gaps = 4/98 (4%)
Frame = -2
Query: 775 EESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPER-QASVY 599
EE +SP R ++N +T + + T STGS P+E P AS
Sbjct: 963 EEMPRPSESPDRMRRNTCPQTEYQCVTGNNGSESSPATTGALSTGSPPRENPSHPTASAL 1022
Query: 598 SDYDLP-KNTLHVIGS--NPGEPKMSYTDPPKKLSKTM 494
S P KN H S + G P M P + +M
Sbjct: 1023 STGSPPMKNPSHPTASALSTGSPPMKNPSHPTASTLSM 1060
>AB002348-1|BAA20807.3| 1062|Homo sapiens KIAA0350 protein protein.
Length = 1062
Score = 31.1 bits (67), Expect = 5.1
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = +3
Query: 291 GSYSTWYCSVASSLNSSTP*TEESPVHS--GPQRPSFKIP--LIVVN 419
GS ST +C + +SSTP T +SP + P+ P +P L++VN
Sbjct: 919 GSGSTSHCDSGGTSSSSTPSTAQSPADAPMSPELPKPHLPDQLVIVN 965
>BX538107-1|CAD98020.1| 264|Homo sapiens hypothetical protein
protein.
Length = 264
Score = 30.7 bits (66), Expect = 6.8
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = -2
Query: 784 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPE 617
S+SEES D +RKK K K +V ++ + T TN K +T R E+ E
Sbjct: 208 SSSEESEERDTKKTKRKKREK-KAHTSVANNEIQERTNKRTNWKVATDERSAESSE 262
>BC072455-1|AAH72455.1| 263|Homo sapiens C11orf57 protein protein.
Length = 263
Score = 30.7 bits (66), Expect = 6.8
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = -2
Query: 784 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPE 617
S+SEES D +RKK K K +V ++ + T TN K +T R E+ E
Sbjct: 207 SSSEESEERDTKKTKRKKREK-KAHTSVANNEIQERTNKRTNWKVATDERSAESSE 261
>BC048133-1|AAH48133.1| 264|Homo sapiens C11orf57 protein protein.
Length = 264
Score = 30.7 bits (66), Expect = 6.8
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = -2
Query: 784 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPE 617
S+SEES D +RKK K K +V ++ + T TN K +T R E+ E
Sbjct: 208 SSSEESEERDTKKTKRKKREK-KAHTSVANNEIQERTNKRTNWKVATDERSAESSE 262
>BC030546-1|AAH30546.2| 264|Homo sapiens chromosome 11 open reading
frame 57 protein.
Length = 264
Score = 30.7 bits (66), Expect = 6.8
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = -2
Query: 784 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPE 617
S+SEES D +RKK K K +V ++ + T TN K +T R E+ E
Sbjct: 208 SSSEESEERDTKKTKRKKREK-KAHTSVANNEIQERTNKRTNWKVATDERSAESSE 262
>BC005403-1|AAH05403.2| 264|Homo sapiens chromosome 11 open reading
frame 57 protein.
Length = 264
Score = 30.7 bits (66), Expect = 6.8
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = -2
Query: 784 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPE 617
S+SEES D +RKK K K +V ++ + T TN K +T R E+ E
Sbjct: 208 SSSEESEERDTKKTKRKKREK-KAHTSVANNEIQERTNKRTNWKVATDERSAESSE 262
>AK125340-1|BAC86137.1| 292|Homo sapiens protein ( Homo sapiens
cDNA FLJ43350 fis, clone NT2RP7004123. ).
Length = 292
Score = 30.7 bits (66), Expect = 6.8
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = -2
Query: 784 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPE 617
S+SEES D +RKK K K +V ++ + T TN K +T R E+ E
Sbjct: 236 SSSEESEERDTKKTKRKKREK-KAHTSVANNEIQERTNKRTNWKVATDERSAESSE 290
>AK001588-1|BAA91774.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ10726 fis, clone NT2RP3001216, weakly similar to
CYLICIN I. ).
Length = 148
Score = 30.7 bits (66), Expect = 6.8
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = -2
Query: 784 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPE 617
S+SEES D +RKK K K +V ++ + T TN K +T R E+ E
Sbjct: 92 SSSEESEERDTKKTKRKKREK-KAHTSVTNNEIQERTNKRTNWKVATDERSAESSE 146
>Z99128-3|CAI20544.1| 654|Homo sapiens SFRS protein kinase 1
protein.
Length = 654
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 664 TNSKSSTGSRPKETPERQASVYSDYDLPKNTLHVIGSNPGE 542
T +K R ET R ++ +S+ DLP+ ++GS+ E
Sbjct: 15 TKAKKDKAQRKSETQHRGSAPHSESDLPEQEEEILGSDDDE 55
>Z99128-2|CAI20545.1| 654|Homo sapiens SFRS protein kinase 1
protein.
Length = 654
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 664 TNSKSSTGSRPKETPERQASVYSDYDLPKNTLHVIGSNPGE 542
T +K R ET R ++ +S+ DLP+ ++GS+ E
Sbjct: 15 TKAKKDKAQRKSETQHRGSAPHSESDLPEQEEEILGSDDDE 55
>U09564-1|AAA20530.1| 655|Homo sapiens serine kinase protein.
Length = 655
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 664 TNSKSSTGSRPKETPERQASVYSDYDLPKNTLHVIGSNPGE 542
T +K R ET R ++ +S+ DLP+ ++GS+ E
Sbjct: 15 TKAKKDKAQRKSETQHRGSAPHSESDLPEQEEEILGSDDDE 55
>BC063688-1|AAH63688.2| 385|Homo sapiens family with sequence
similarity 54, member A protein.
Length = 385
Score = 30.3 bits (65), Expect = 8.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 736 SFERENRRWTNSPLMSMET 792
SFE+ENR W +SP S ET
Sbjct: 328 SFEKENRSWESSPFSSPET 346
>BC046124-1|AAH46124.2| 805|Homo sapiens RSF1 protein protein.
Length = 805
Score = 30.3 bits (65), Expect = 8.9
Identities = 30/160 (18%), Positives = 67/160 (41%), Gaps = 2/160 (1%)
Frame = -2
Query: 808 LSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPK 629
LS ST ++ ++ + KK+ + ++ ++ + +K T++ +++ R
Sbjct: 351 LSSKTALSSTESCTMKGEEKSPKTKKDKRPPILECLEKLEKSKKTFLDKDAQ-----RLS 405
Query: 628 ETPERQASVYSDYDLPKNTLHVIGSNPGEPKMSYTDPPKKLSKTMKKFLRNMDKHKCDQY 449
PE ++PK+TL PG P+ + T PP + +K + +C
Sbjct: 406 PIPE---------EVPKSTLE--SEKPGSPEAAETSPPSNIIDHCEKLASEKEVVECQST 454
Query: 448 MKSSEKAVSK--LTTMRGILKDGRCGPECTGDSSVQGVEE 335
++V K L T++ + + + ++ G+EE
Sbjct: 455 STVGGQSVKKVDLETLKEDSEFTKVEMDNLDNAQTSGIEE 494
>BC038292-1|AAH38292.1| 655|Homo sapiens SFRS protein kinase 1
protein.
Length = 655
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 664 TNSKSSTGSRPKETPERQASVYSDYDLPKNTLHVIGSNPGE 542
T +K R ET R ++ +S+ DLP+ ++GS+ E
Sbjct: 15 TKAKKDKAQRKSETQHRGSAPHSESDLPEQEEEILGSDDDE 55
>BC011716-1|AAH11716.2| 301|Homo sapiens FAM54A protein protein.
Length = 301
Score = 30.3 bits (65), Expect = 8.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 736 SFERENRRWTNSPLMSMET 792
SFE+ENR W +SP S ET
Sbjct: 244 SFEKENRSWESSPFSSPET 262
>AL138828-1|CAI95284.1| 379|Homo sapiens family with sequence
similarity 54, member A protein.
Length = 379
Score = 30.3 bits (65), Expect = 8.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 736 SFERENRRWTNSPLMSMET 792
SFE+ENR W +SP S ET
Sbjct: 322 SFEKENRSWESSPFSSPET 340
>AL121713-2|CAI17908.1| 379|Homo sapiens family with sequence
similarity 54, member A protein.
Length = 379
Score = 30.3 bits (65), Expect = 8.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 736 SFERENRRWTNSPLMSMET 792
SFE+ENR W +SP S ET
Sbjct: 322 SFEKENRSWESSPFSSPET 340
>AK125758-1|BAC86277.1| 342|Homo sapiens protein ( Homo sapiens
cDNA FLJ43770 fis, clone TESTI2049469. ).
Length = 342
Score = 30.3 bits (65), Expect = 8.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 736 SFERENRRWTNSPLMSMET 792
SFE+ENR W +SP S ET
Sbjct: 285 SFEKENRSWESSPFSSPET 303
>AK001268-1|BAA91591.1| 572|Homo sapiens protein ( Homo sapiens
cDNA FLJ10406 fis, clone NT2RM4000515. ).
Length = 572
Score = 30.3 bits (65), Expect = 8.9
Identities = 30/160 (18%), Positives = 67/160 (41%), Gaps = 2/160 (1%)
Frame = -2
Query: 808 LSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPK 629
LS ST ++ ++ + KK+ + ++ ++ + +K T++ +++ R
Sbjct: 54 LSSKTALSSTESCTMKGEEKSPKTKKDKRPPILECLEKLEKSKKTFLDKDAQ-----RLS 108
Query: 628 ETPERQASVYSDYDLPKNTLHVIGSNPGEPKMSYTDPPKKLSKTMKKFLRNMDKHKCDQY 449
PE ++PK+TL PG P+ + T PP + +K + +C
Sbjct: 109 PIPE---------EVPKSTLE--SEKPGSPEAAETSPPSNIIDHCEKLASEKEVVECQST 157
Query: 448 MKSSEKAVSK--LTTMRGILKDGRCGPECTGDSSVQGVEE 335
++V K L T++ + + + ++ G+EE
Sbjct: 158 STVGGQSVKKVDLETLKEDSEFTKVEMDNLDNAQTSGIEE 197
>AJ318054-1|CAC39299.1| 826|Homo sapiens SRPK1a protein kinase
protein.
Length = 826
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 664 TNSKSSTGSRPKETPERQASVYSDYDLPKNTLHVIGSNPGE 542
T +K R ET R ++ +S+ DLP+ ++GS+ E
Sbjct: 186 TKAKKDKAQRKSETQHRGSAPHSESDLPEQEEEILGSDDDE 226
>AF380176-1|AAK57515.1| 1431|Homo sapiens HBV pX associated protein
8 large isoform protein.
Length = 1431
Score = 30.3 bits (65), Expect = 8.9
Identities = 30/160 (18%), Positives = 67/160 (41%), Gaps = 2/160 (1%)
Frame = -2
Query: 808 LSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPK 629
LS ST ++ ++ + KK+ + ++ ++ + +K T++ +++ R
Sbjct: 540 LSSKTALSSTESCTMKGEEKSPKTKKDKRPPILECLEKLEKSKKTFLDKDAQ-----RLS 594
Query: 628 ETPERQASVYSDYDLPKNTLHVIGSNPGEPKMSYTDPPKKLSKTMKKFLRNMDKHKCDQY 449
PE ++PK+TL PG P+ + T PP + +K + +C
Sbjct: 595 PIPE---------EVPKSTLE--SEKPGSPEAAETSPPSNIIDHCEKLASEKEVVECQST 643
Query: 448 MKSSEKAVSK--LTTMRGILKDGRCGPECTGDSSVQGVEE 335
++V K L T++ + + + ++ G+EE
Sbjct: 644 STVGGQSVKKVDLETLKEDSEFTKVEMDNLDNAQTSGIEE 683
>AF227948-1|AAF61709.2| 1189|Homo sapiens HBV pX associated
protein-8 protein.
Length = 1189
Score = 30.3 bits (65), Expect = 8.9
Identities = 30/160 (18%), Positives = 67/160 (41%), Gaps = 2/160 (1%)
Frame = -2
Query: 808 LSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPK 629
LS ST ++ ++ + KK+ + ++ ++ + +K T++ +++ R
Sbjct: 298 LSSKTALSSTESCTMKGEEKSPKTKKDKRPPILECLEKLEKSKKTFLDKDAQ-----RLS 352
Query: 628 ETPERQASVYSDYDLPKNTLHVIGSNPGEPKMSYTDPPKKLSKTMKKFLRNMDKHKCDQY 449
PE ++PK+TL PG P+ + T PP + +K + +C
Sbjct: 353 PIPE---------EVPKSTLE--SEKPGSPEAAETSPPSNIIDHCEKLASEKEVVECQST 401
Query: 448 MKSSEKAVSK--LTTMRGILKDGRCGPECTGDSSVQGVEE 335
++V K L T++ + + + ++ G+EE
Sbjct: 402 STVGGQSVKKVDLETLKEDSEFTKVEMDNLDNAQTSGIEE 441
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,529,655
Number of Sequences: 237096
Number of extensions: 2799872
Number of successful extensions: 7686
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 7108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7678
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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