Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11n16
(830 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 26 0.37
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 25 1.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.5
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 6.0
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 6.0
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 6.0
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 22 6.0
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 8.0
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 8.0
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 8.0
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 8.0
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 8.0
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 8.0
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 8.0
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 8.0
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 8.0
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 8.0
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 8.0
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 8.0
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 8.0
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 8.0
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 8.0
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 22 8.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 8.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 8.0
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 26.2 bits (55), Expect = 0.37
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = -2
Query: 577 NTLHVIGSNPGEPKMSYTDPPKKLSKTMKKFLRNMDKHKCDQYMKS 440
N + G P P Y PP K K +KF+ + + D Y S
Sbjct: 102 NKMSTRGKRPASP--GYVQPPTKHQKLDQKFIFPQENNYNDNYFYS 145
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = -2
Query: 781 TSEESLSNDDSPVRRKK--NAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQA 608
T ++ D P+R +A T + PD+ + ++P + S SR E +++
Sbjct: 1449 TRAQTFDGKDYPLRLGPCWHAVMTTYPRINPDNHNEKLHIPKDKSVSVLSRENEAGQKEV 1508
Query: 607 SV 602
V
Sbjct: 1509 KV 1510
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 693 SGCTFCTVLFLAFFFLRT 746
S C VLF+ F FLRT
Sbjct: 14 SSCVIFGVLFVLFSFLRT 31
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 693 SGCTFCTVLFLAFFFLRT 746
S C VLF+ F FLRT
Sbjct: 14 SSCVIFGVLFVLFSFLRT 31
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 22.2 bits (45), Expect = 6.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 313 QYQVEYDPRTNYTKQNPDKNV 251
QY++ + P T + N DKNV
Sbjct: 490 QYRLNHKPFTYHIVVNSDKNV 510
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 6.0
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -2
Query: 802 LNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNV 701
L PS + S+ + SP+ K+N T+ V
Sbjct: 1200 LRYAIPSAGDISIESKSSPLVYKRNINTYTLDGV 1233
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.2 bits (45), Expect = 6.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 313 QYQVEYDPRTNYTKQNPDKNV 251
QY++ + P T + N DKNV
Sbjct: 490 QYRLNHKPFTYHIVVNSDKNV 510
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 22.2 bits (45), Expect = 6.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 313 QYQVEYDPRTNYTKQNPDKNV 251
QY++ + P T + N DKNV
Sbjct: 116 QYRLNHKPFTYHIVVNSDKNV 136
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -1
Query: 779 IRGEFVQRRFSRSKEKERQ 723
+R +RR+SRS+E+E++
Sbjct: 30 LRERTSRRRYSRSREREQK 48
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -1
Query: 779 IRGEFVQRRFSRSKEKERQ 723
+R +RR+SRS+E+E++
Sbjct: 30 LRERTSRRRYSRSREREQK 48
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -1
Query: 779 IRGEFVQRRFSRSKEKERQ 723
+R +RR+SRS+E+E++
Sbjct: 30 LRERTSRRRYSRSREREQK 48
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -1
Query: 779 IRGEFVQRRFSRSKEKERQ 723
+R +RR+SRS+E+E++
Sbjct: 30 LRERTSRRRYSRSREREQK 48
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -1
Query: 779 IRGEFVQRRFSRSKEKERQ 723
+R +RR+SRS+E+E++
Sbjct: 30 LRERTSRRRYSRSREREQK 48
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 8.0
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = -2
Query: 775 EESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQASVYS 596
E+S S D S +KK+ + + NV+ + T S+S + ER+ Y
Sbjct: 1 EKSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYR 60
Query: 595 D 593
+
Sbjct: 61 E 61
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -1
Query: 779 IRGEFVQRRFSRSKEKERQ 723
+R +RR+SRS+E+E++
Sbjct: 30 LRERTSRRRYSRSREREQK 48
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -1
Query: 779 IRGEFVQRRFSRSKEKERQ 723
+R +RR+SRS+E+E++
Sbjct: 30 LRERTSRRRYSRSREREQK 48
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.0
Identities = 15/66 (22%), Positives = 27/66 (40%)
Frame = -2
Query: 790 FPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQ 611
+ + E S S D S +KK+ + + NV+ + T S+S + ER+
Sbjct: 245 YRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNERE 304
Query: 610 ASVYSD 593
Y +
Sbjct: 305 YREYRE 310
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.0
Identities = 15/66 (22%), Positives = 27/66 (40%)
Frame = -2
Query: 790 FPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQ 611
+ + E S S D S +KK+ + + NV+ + T S+S + ER+
Sbjct: 245 YRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNERE 304
Query: 610 ASVYSD 593
Y +
Sbjct: 305 YREYRE 310
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.0
Identities = 15/66 (22%), Positives = 27/66 (40%)
Frame = -2
Query: 790 FPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQ 611
+ + E S S D S +KK+ + + NV+ + T S+S + ER+
Sbjct: 245 YRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNERE 304
Query: 610 ASVYSD 593
Y +
Sbjct: 305 YREYRE 310
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.0
Identities = 15/66 (22%), Positives = 27/66 (40%)
Frame = -2
Query: 790 FPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQ 611
+ + E S S D S +KK+ + + NV+ + T S+S + ER+
Sbjct: 245 YRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNERE 304
Query: 610 ASVYSD 593
Y +
Sbjct: 305 YREYRE 310
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.0
Identities = 15/66 (22%), Positives = 27/66 (40%)
Frame = -2
Query: 790 FPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQ 611
+ + E S S D S +KK+ + + NV+ + T S+S + ER+
Sbjct: 245 YRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNERE 304
Query: 610 ASVYSD 593
Y +
Sbjct: 305 YREYRE 310
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.0
Identities = 15/66 (22%), Positives = 27/66 (40%)
Frame = -2
Query: 790 FPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQ 611
+ + E S S D S +KK+ + + NV+ + T S+S + ER+
Sbjct: 245 YRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNERE 304
Query: 610 ASVYSD 593
Y +
Sbjct: 305 YREYRE 310
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -1
Query: 779 IRGEFVQRRFSRSKEKERQ 723
+R +RR+SRS+E+E++
Sbjct: 278 LRERTSRRRYSRSREREQK 296
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.0
Identities = 15/66 (22%), Positives = 27/66 (40%)
Frame = -2
Query: 790 FPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQ 611
+ + E S S D S +KK+ + + NV+ + T S+S + ER+
Sbjct: 245 YRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNERE 304
Query: 610 ASVYSD 593
Y +
Sbjct: 305 YREYRE 310
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 21.8 bits (44), Expect = 8.0
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +2
Query: 248 SDIFVRILFCVVCSWVIFDLVLQCCFIVEFFNTLN 352
+++ I+FC+ V Q IV+FF LN
Sbjct: 238 TNVMGMIVFCITFGLVAGQFGAQGKLIVDFFMILN 272
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 8.0
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 725 GVLFPSNGRIVVGQ 766
G P+NGR ++GQ
Sbjct: 459 GFALPTNGRFMIGQ 472
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 8.0
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 725 GVLFPSNGRIVVGQ 766
G P+NGR ++GQ
Sbjct: 459 GFALPTNGRFMIGQ 472
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,132
Number of Sequences: 438
Number of extensions: 5298
Number of successful extensions: 62
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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