Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11n15
(782 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006389-1|AAH06389.1| 323|Homo sapiens poly (ADP-ribose) polym... 109 8e-24
BC031074-1|AAH31074.1| 322|Homo sapiens poly (ADP-ribose) polym... 109 1e-23
AK000516-1|BAA91222.1| 207|Homo sapiens protein ( Homo sapiens ... 72 3e-12
BC075801-1|AAH75801.1| 812|Homo sapiens PARP8 protein protein. 36 0.008
AK024961-1|BAB15044.1| 501|Homo sapiens protein ( Homo sapiens ... 36 0.008
BC110902-1|AAI10903.1| 630|Homo sapiens poly (ADP-ribose) polym... 35 0.014
BC015314-1|AAH15314.1| 563|Homo sapiens PARP6 protein protein. 35 0.014
BC037386-1|AAH37386.1| 494|Homo sapiens PARP8 protein protein. 36 0.12
BC119689-1|AAI19690.1| 554|Homo sapiens PARP6 protein protein. 35 0.29
BC119688-1|AAI19689.1| 554|Homo sapiens PARP6 protein protein. 35 0.29
D79999-1|BAA11494.2| 1725|Homo sapiens KIAA0177 protein protein. 34 0.50
AL359763-3|CAI12394.1| 1724|Homo sapiens poly (ADP-ribose) polym... 34 0.50
AF158255-1|AAD47250.1| 1724|Homo sapiens vault protein protein. 34 0.50
AF057160-1|AAC62491.1| 1724|Homo sapiens putative poly(ADP-ribos... 34 0.50
BC026158-1|AAH26158.1| 1315|Homo sapiens serine/threonine kinase... 30 8.2
AF200815-1|AAF97028.1| 1315|Homo sapiens FUSED serine/threonine ... 30 8.2
AB033104-1|BAA86592.1| 1311|Homo sapiens KIAA1278 protein protein. 30 8.2
>BC006389-1|AAH06389.1| 323|Homo sapiens poly (ADP-ribose)
polymerase family, member 16 protein.
Length = 323
Score = 109 bits (263), Expect = 8e-24
Identities = 54/142 (38%), Positives = 85/142 (59%)
Frame = -1
Query: 776 ELSKNHNVFYAYHGNRLENFYTILNFGLQQHLNKNTSLGNGVYLSPELSATIPHSHGGFG 597
E ++ YA+HG+RLENF++I++ GL HLNK + G G YL+ +LS + +S G G
Sbjct: 140 ETKGERDLIYAFHGSRLENFHSIIHNGLHCHLNKTSLFGEGTYLTSDLSLALIYSPHGHG 199
Query: 596 WGASCIGGHLSCVALCEVVDAPEGINYQKPVSNEGDGLYKDGKTDHMRVNGETQVTQYIV 417
W S +G LSCVA+CEV+D P+ + Q + + + + H G+ ++V
Sbjct: 200 WQHSLLGPILSCVAVCEVIDHPD-VKCQTKKKDSKEIDRRRARIKHSE-GGDIPPKYFVV 257
Query: 416 TNCDLVRIRYLLVYAKQPASLR 351
TN L+R++YLLVY+++P R
Sbjct: 258 TNNQLLRVKYLLVYSQKPPKSR 279
>BC031074-1|AAH31074.1| 322|Homo sapiens poly (ADP-ribose)
polymerase family, member 16 protein.
Length = 322
Score = 109 bits (261), Expect = 1e-23
Identities = 53/138 (38%), Positives = 84/138 (60%)
Frame = -1
Query: 776 ELSKNHNVFYAYHGNRLENFYTILNFGLQQHLNKNTSLGNGVYLSPELSATIPHSHGGFG 597
E ++ YA+HG+RLENF++I++ GL HLNK + G G YL+ +LS + +S G G
Sbjct: 140 ETKGERDLIYAFHGSRLENFHSIIHNGLHCHLNKTSLFGEGTYLTSDLSLALIYSPHGHG 199
Query: 596 WGASCIGGHLSCVALCEVVDAPEGINYQKPVSNEGDGLYKDGKTDHMRVNGETQVTQYIV 417
W S +G LSCVA+CEV+D P+ + Q + + + + H G+ ++V
Sbjct: 200 WQHSLLGPILSCVAVCEVIDHPD-VKCQTKKKDSKEIDRRRARIKHSE-GGDIPPKYFVV 257
Query: 416 TNCDLVRIRYLLVYAKQP 363
TN L+R++YLLVY+++P
Sbjct: 258 TNNQLLRVKYLLVYSQKP 275
>AK000516-1|BAA91222.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ20509 fis, clone KAT09623. ).
Length = 207
Score = 71.7 bits (168), Expect = 3e-12
Identities = 39/104 (37%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = -1
Query: 671 TSL-GNGVYLSPELSATIPHSHGGFGWGASCIGGHLSCVALCEVVDAPEGINYQKPVSNE 495
TSL G G YL+ +LS + +S G GW S +G LSCVA+CEV+D P+ + Q +
Sbjct: 59 TSLFGEGTYLTSDLSLALIYSPHGHGWQHSLLGPILSCVAVCEVIDHPD-VKCQTKKKDS 117
Query: 494 GDGLYKDGKTDHMRVNGETQVTQYIVTNCDLVRIRYLLVYAKQP 363
+ + + H G+ ++VTN L+R++YLLVY+++P
Sbjct: 118 KEIDRRRARIKHSE-GGDIPPKYFVVTNNQLLRVKYLLVYSQKP 160
>BC075801-1|AAH75801.1| 812|Homo sapiens PARP8 protein protein.
Length = 812
Score = 36.3 bits (80), Expect(2) = 0.008
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Frame = -1
Query: 749 YAYHGNRLENFYTILNFGLQQHLNKNTSL-----GNGVYLSPELSATIPHS 612
+A+HG+ +EN+++IL GL N L G+G+YLSP S + +S
Sbjct: 652 FAFHGSHIENWHSILRNGLVVASNTRLQLHGAMYGSGIYLSPMSSISFGYS 702
Score = 23.0 bits (47), Expect(2) = 0.008
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 572 HLSCVALCEVVDAPE 528
+L C+ALCEV+ + +
Sbjct: 742 NLKCIALCEVITSSD 756
>AK024961-1|BAB15044.1| 501|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21308 fis, clone COL02131. ).
Length = 501
Score = 36.3 bits (80), Expect(2) = 0.008
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Frame = -1
Query: 749 YAYHGNRLENFYTILNFGLQQHLNKNTSL-----GNGVYLSPELSATIPHS 612
+A+HG+ +EN+++IL GL N L G+G+YLSP S + +S
Sbjct: 341 FAFHGSHIENWHSILRNGLVVASNTRLQLHGAMYGSGIYLSPMSSISFGYS 391
Score = 23.0 bits (47), Expect(2) = 0.008
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 572 HLSCVALCEVVDAPE 528
+L C+ALCEV+ + +
Sbjct: 431 NLKCIALCEVITSSD 445
>BC110902-1|AAI10903.1| 630|Homo sapiens poly (ADP-ribose)
polymerase family, member 6 protein.
Length = 630
Score = 35.1 bits (77), Expect(2) = 0.014
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = -1
Query: 782 WKELSKNHNVFYAYHGNRLENFYTILNFGLQQHLNKNTSL-----GNGVYLSPELSATIP 618
++ K + +A+HG+ +EN+++IL GL L G G+YLSP S +
Sbjct: 459 FRTAKKLYGSTFAFHGSHIENWHSILRNGLVNASYTKLQLHGAAYGKGIYLSPISSISFG 518
Query: 617 HSHGGFG 597
+S G G
Sbjct: 519 YSGMGKG 525
Score = 23.4 bits (48), Expect(2) = 0.014
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = -1
Query: 572 HLSCVALCEVVDAPE 528
+L+C+ALCEV+ + +
Sbjct: 560 NLNCIALCEVITSKD 574
>BC015314-1|AAH15314.1| 563|Homo sapiens PARP6 protein protein.
Length = 563
Score = 35.1 bits (77), Expect(2) = 0.014
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = -1
Query: 782 WKELSKNHNVFYAYHGNRLENFYTILNFGLQQHLNKNTSL-----GNGVYLSPELSATIP 618
++ K + +A+HG+ +EN+++IL GL L G G+YLSP S +
Sbjct: 392 FRTAKKLYGSTFAFHGSHIENWHSILRNGLVNASYTKLQLHGAAYGKGIYLSPISSISFG 451
Query: 617 HSHGGFG 597
+S G G
Sbjct: 452 YSGMGKG 458
Score = 23.4 bits (48), Expect(2) = 0.014
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = -1
Query: 572 HLSCVALCEVVDAPE 528
+L+C+ALCEV+ + +
Sbjct: 493 NLNCIALCEVITSKD 507
>BC037386-1|AAH37386.1| 494|Homo sapiens PARP8 protein protein.
Length = 494
Score = 36.3 bits (80), Expect = 0.12
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Frame = -1
Query: 749 YAYHGNRLENFYTILNFGLQQHLNKNTSL-----GNGVYLSPELSATIPHS 612
+A+HG+ +EN+++IL GL N L G+G+YLSP S + +S
Sbjct: 405 FAFHGSHIENWHSILRNGLVVASNTRLQLHGAMYGSGIYLSPMSSISFGYS 455
>BC119689-1|AAI19690.1| 554|Homo sapiens PARP6 protein protein.
Length = 554
Score = 35.1 bits (77), Expect = 0.29
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = -1
Query: 782 WKELSKNHNVFYAYHGNRLENFYTILNFGLQQHLNKNTSL-----GNGVYLSPELSATIP 618
++ K + +A+HG+ +EN+++IL GL L G G+YLSP S +
Sbjct: 460 FRTAKKLYGSTFAFHGSHIENWHSILRNGLVNASYTKLQLHGAAYGKGIYLSPISSISFG 519
Query: 617 HSHGGFG 597
+S G G
Sbjct: 520 YSGMGKG 526
>BC119688-1|AAI19689.1| 554|Homo sapiens PARP6 protein protein.
Length = 554
Score = 35.1 bits (77), Expect = 0.29
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = -1
Query: 782 WKELSKNHNVFYAYHGNRLENFYTILNFGLQQHLNKNTSL-----GNGVYLSPELSATIP 618
++ K + +A+HG+ +EN+++IL GL L G G+YLSP S +
Sbjct: 460 FRTAKKLYGSTFAFHGSHIENWHSILRNGLVNASYTKLQLHGAAYGKGIYLSPISSISFG 519
Query: 617 HSHGGFG 597
+S G G
Sbjct: 520 YSGMGKG 526
>D79999-1|BAA11494.2| 1725|Homo sapiens KIAA0177 protein protein.
Length = 1725
Score = 34.3 bits (75), Expect = 0.50
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Frame = -1
Query: 773 LSKNHNVFYAYHGNRLENFYTILNFGL------QQHLNKNTSLGN---GVYLSPELSATI 621
LSK NV HG+ ++N IL GL + + T +GN G+Y S LS +I
Sbjct: 428 LSKLGNVRPLLHGSPVQNIVGILCRGLLLPKVVEDRGVQRTDVGNLGSGIYFSDSLSTSI 487
Query: 620 PHSHGGFGWGASCIGGHLSC-VALCEVVDAPEGINYQKPVSNEG-DGLYKDGKTDHMRVN 447
+SH G G + L C VAL + +D E ++ + G D ++ G + V
Sbjct: 488 KYSHPGETDGTRLL---LICDVALGKCMDLHEK-DFSLTEAPPGYDSVH--GVSQTASVT 541
Query: 446 GETQVTQYIVTNCDLVRIRYLLVYAKQPASLR-FH 345
+ + +++V + V+++Y++ ++ ++ FH
Sbjct: 542 TDFEDDEFVVYKTNQVKMKYIIKFSMPGDQIKDFH 576
>AL359763-3|CAI12394.1| 1724|Homo sapiens poly (ADP-ribose)
polymerase family, member 4 protein.
Length = 1724
Score = 34.3 bits (75), Expect = 0.50
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Frame = -1
Query: 773 LSKNHNVFYAYHGNRLENFYTILNFGL------QQHLNKNTSLGN---GVYLSPELSATI 621
LSK NV HG+ ++N IL GL + + T +GN G+Y S LS +I
Sbjct: 427 LSKLGNVRPLLHGSPVQNIVGILCRGLLLPKVVEDRGVQRTDVGNLGSGIYFSDSLSTSI 486
Query: 620 PHSHGGFGWGASCIGGHLSC-VALCEVVDAPEGINYQKPVSNEG-DGLYKDGKTDHMRVN 447
+SH G G + L C VAL + +D E ++ + G D ++ G + V
Sbjct: 487 KYSHPGETDGTRLL---LICDVALGKCMDLHEK-DFSLTEAPPGYDSVH--GVSQTASVT 540
Query: 446 GETQVTQYIVTNCDLVRIRYLLVYAKQPASLR-FH 345
+ + +++V + V+++Y++ ++ ++ FH
Sbjct: 541 TDFEDDEFVVYKTNQVKMKYIIKFSMPGDQIKDFH 575
>AF158255-1|AAD47250.1| 1724|Homo sapiens vault protein protein.
Length = 1724
Score = 34.3 bits (75), Expect = 0.50
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Frame = -1
Query: 773 LSKNHNVFYAYHGNRLENFYTILNFGL------QQHLNKNTSLGN---GVYLSPELSATI 621
LSK NV HG+ ++N IL GL + + T +GN G+Y S LS +I
Sbjct: 427 LSKLGNVRPLLHGSPVQNIVGILCRGLLLPKVVEDRGVQRTDVGNLGSGIYFSDSLSTSI 486
Query: 620 PHSHGGFGWGASCIGGHLSC-VALCEVVDAPEGINYQKPVSNEGDGLYK-DGKTDHMRVN 447
+SH G G + L C VAL + +D E P++ G G + V
Sbjct: 487 KYSHPGETDGTRLL---LICDVALGKCMDLHE---KDFPLTEAPPGYDSVHGVSQTASVT 540
Query: 446 GETQVTQYIVTNCDLVRIRYLLVYAKQPASLR-FH 345
+ + +++V + V+++Y++ ++ ++ FH
Sbjct: 541 TDFEDDEFVVYKTNQVKMKYIIKFSMPGDQIKDFH 575
>AF057160-1|AAC62491.1| 1724|Homo sapiens putative poly(ADP-ribosyl)
transferase protein.
Length = 1724
Score = 34.3 bits (75), Expect = 0.50
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Frame = -1
Query: 773 LSKNHNVFYAYHGNRLENFYTILNFGL------QQHLNKNTSLGN---GVYLSPELSATI 621
LSK NV HG+ ++N IL GL + + T +GN G+Y S LS +I
Sbjct: 427 LSKLGNVRPLLHGSPVQNIVGILCRGLLLPKVVEDRGVQRTDVGNLGSGIYFSDSLSTSI 486
Query: 620 PHSHGGFGWGASCIGGHLSC-VALCEVVDAPEGINYQKPVSNEG-DGLYKDGKTDHMRVN 447
+SH G G + L C VAL + +D E ++ + G D ++ G + V
Sbjct: 487 KYSHPGETDGTRLL---LICDVALGKCMDLHEK-DFSLTEAPPGYDSVH--GVSQTASVT 540
Query: 446 GETQVTQYIVTNCDLVRIRYLLVYAKQPASLR-FH 345
+ + +++V + V+++Y++ ++ ++ FH
Sbjct: 541 TDFEDDEFVVYKTNQVKMKYIIKFSMPGDQIKDFH 575
>BC026158-1|AAH26158.1| 1315|Homo sapiens serine/threonine kinase
36, fused homolog (Drosophila) protein.
Length = 1315
Score = 30.3 bits (65), Expect = 8.2
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = -1
Query: 710 ILNFGLQQHLNKNTSL-----GNGVYLSPELSATIPHSHGGFGWGASCI 579
+ +FG + ++ NT + G +Y+SPEL P+ H W CI
Sbjct: 141 LCDFGFARAMSTNTMVLTSIKGTPLYMSPELVEERPYDHTADLWSVGCI 189
>AF200815-1|AAF97028.1| 1315|Homo sapiens FUSED serine/threonine
kinase protein.
Length = 1315
Score = 30.3 bits (65), Expect = 8.2
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = -1
Query: 710 ILNFGLQQHLNKNTSL-----GNGVYLSPELSATIPHSHGGFGWGASCI 579
+ +FG + ++ NT + G +Y+SPEL P+ H W CI
Sbjct: 141 LCDFGFARAMSTNTMVLTSIKGTPLYMSPELVEERPYDHTADLWSVGCI 189
>AB033104-1|BAA86592.1| 1311|Homo sapiens KIAA1278 protein protein.
Length = 1311
Score = 30.3 bits (65), Expect = 8.2
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = -1
Query: 710 ILNFGLQQHLNKNTSL-----GNGVYLSPELSATIPHSHGGFGWGASCI 579
+ +FG + ++ NT + G +Y+SPEL P+ H W CI
Sbjct: 158 LCDFGFARAMSTNTMVLTSIKGTPLYMSPELVEERPYDHTADLWSVGCI 206
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,372,310
Number of Sequences: 237096
Number of extensions: 2703273
Number of successful extensions: 12375
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12361
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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