Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte11n14
         (723 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC089426-1|AAH89426.1|  840|Homo sapiens establishment of cohesi...    34   0.45 
AK090579-1|BAC03483.1|  386|Homo sapiens protein ( Homo sapiens ...    34   0.45 
AB067498-1|BAB67804.1|  864|Homo sapiens KIAA1911 protein protein.     34   0.45 
BC067215-1|AAH67215.1| 1160|Homo sapiens EHBP1 protein protein.        30   9.6  
AY531390-1|AAS48537.1| 1196|Homo sapiens EH domain binding prote...    30   9.6  
AY331186-1|AAQ97141.1| 1231|Homo sapiens NPF/calponin-like prote...    30   9.6  
AC007098-1|AAY14789.1|  893|Homo sapiens unknown protein.              30   9.6  
AB020710-1|BAA74926.1|  962|Homo sapiens KIAA0903 protein protein.     30   9.6  

>BC089426-1|AAH89426.1|  840|Homo sapiens establishment of cohesion
           1 homolog 1 (S. cerevisiae) protein.
          Length = 840

 Score = 34.3 bits (75), Expect = 0.45
 Identities = 15/49 (30%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
 Frame = +2

Query: 500 HGVFLSARKHFG--VQRCYPT*ADGKIMLVLPDKSRYKIESMNELQALI 640
           H  F+SA K+ G   +R      DG+I++VLP+  +Y ++ ++E++ ++
Sbjct: 641 HNQFISAVKYVGWKKERILAEYPDGRIIMVLPEDPKYALKKVDEIREMV 689


>AK090579-1|BAC03483.1|  386|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33260 fis, clone ASTRO2005896, weakly similar to
           DNA damage inducible protein. ).
          Length = 386

 Score = 34.3 bits (75), Expect = 0.45
 Identities = 15/49 (30%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
 Frame = +2

Query: 500 HGVFLSARKHFG--VQRCYPT*ADGKIMLVLPDKSRYKIESMNELQALI 640
           H  F+SA K+ G   +R      DG+I++VLP+  +Y ++ ++E++ ++
Sbjct: 187 HNQFISAVKYVGWKKERILAEYPDGRIIMVLPEDPKYALKKVDEIREMV 235


>AB067498-1|BAB67804.1|  864|Homo sapiens KIAA1911 protein protein.
          Length = 864

 Score = 34.3 bits (75), Expect = 0.45
 Identities = 15/49 (30%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
 Frame = +2

Query: 500 HGVFLSARKHFG--VQRCYPT*ADGKIMLVLPDKSRYKIESMNELQALI 640
           H  F+SA K+ G   +R      DG+I++VLP+  +Y ++ ++E++ ++
Sbjct: 665 HNQFISAVKYVGWKKERILAEYPDGRIIMVLPEDPKYALKKVDEIREMV 713


>BC067215-1|AAH67215.1| 1160|Homo sapiens EHBP1 protein protein.
          Length = 1160

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +2

Query: 383 PRPVLVRFMNIESRQAVWDSXTSLKGTGVTISEFLTKIRHGV-FLSARKHF 532
           P PVL R  N      VW    +    GV I+ F T  R+G+ F +   HF
Sbjct: 400 PSPVLGRKPNASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHF 450


>AY531390-1|AAS48537.1| 1196|Homo sapiens EH domain binding protein
           1 protein.
          Length = 1196

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +2

Query: 383 PRPVLVRFMNIESRQAVWDSXTSLKGTGVTISEFLTKIRHGV-FLSARKHF 532
           P PVL R  N      VW    +    GV I+ F T  R+G+ F +   HF
Sbjct: 400 PSPVLGRKPNASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHF 450


>AY331186-1|AAQ97141.1| 1231|Homo sapiens NPF/calponin-like protein
           protein.
          Length = 1231

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +2

Query: 383 PRPVLVRFMNIESRQAVWDSXTSLKGTGVTISEFLTKIRHGV-FLSARKHF 532
           P PVL R  N      VW    +    GV I+ F T  R+G+ F +   HF
Sbjct: 435 PSPVLGRKPNASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHF 485


>AC007098-1|AAY14789.1|  893|Homo sapiens unknown protein.
          Length = 893

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +2

Query: 383 PRPVLVRFMNIESRQAVWDSXTSLKGTGVTISEFLTKIRHGV-FLSARKHF 532
           P PVL R  N      VW    +    GV I+ F T  R+G+ F +   HF
Sbjct: 223 PSPVLGRKPNASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHF 273


>AB020710-1|BAA74926.1|  962|Homo sapiens KIAA0903 protein protein.
          Length = 962

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +2

Query: 383 PRPVLVRFMNIESRQAVWDSXTSLKGTGVTISEFLTKIRHGV-FLSARKHF 532
           P PVL R  N      VW    +    GV I+ F T  R+G+ F +   HF
Sbjct: 166 PSPVLGRKPNASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHF 216


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,692,138
Number of Sequences: 237096
Number of extensions: 1688582
Number of successful extensions: 6349
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6349
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)