Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11n03
(812 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0076 + 22558105-22558261,22558356-22558405,22559837-225600... 43 3e-04
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 38 0.007
03_05_1124 + 30559633-30559674,30559781-30559890,30559973-305600... 35 0.067
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 34 0.12
02_03_0314 - 17600970-17600974,17601230-17601357,17601832-176019... 33 0.20
06_01_0449 - 3176135-3176329,3176531-3177289,3177420-3177905,317... 33 0.27
07_03_1154 - 24402550-24405073,24405909-24406330,24407318-24408856 32 0.47
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 32 0.62
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 31 1.1
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 31 1.1
08_02_0290 + 15383473-15383669,15385057-15385267,15386389-153864... 31 1.4
05_01_0170 + 1180168-1180367,1181538-1181598,1181657-1181659,118... 31 1.4
01_06_0116 - 26595570-26596607,26596964-26598353,26599386-265999... 31 1.4
12_02_1286 - 27555143-27555191,27555290-27555511,27555911-275561... 30 2.5
05_03_0443 + 14057080-14057201,14058566-14058698,14058758-140587... 30 2.5
05_03_0442 + 14040280-14040371,14040449-14040517,14041217-140413... 30 2.5
06_02_0083 - 11539955-11540257,11540594-11540742,11540938-115410... 29 3.3
07_01_0165 + 1159821-1161362 29 4.4
07_03_1773 - 29422660-29422806,29423103-29423201,29423811-294239... 29 5.8
05_01_0146 - 953957-956278,956468-956786,957185-957213 28 7.7
02_05_0377 + 28408751-28409113,28409545-28410129,28411212-28411385 28 7.7
>04_04_0076 +
22558105-22558261,22558356-22558405,22559837-22560044,
22560112-22560237,22560469-22560567,22560729-22561405,
22561483-22561731,22561808-22561936,22562021-22562089,
22562183-22562256,22563086-22563098,22563361-22563468,
22563541-22563651,22563725-22563811,22564043-22564068,
22564840-22564906,22565123-22565212,22565295-22565387,
22565515-22565604,22565699-22565761,22566349-22566447
Length = 894
Score = 43.2 bits (97), Expect = 3e-04
Identities = 54/233 (23%), Positives = 102/233 (43%), Gaps = 16/233 (6%)
Frame = -1
Query: 806 YVEMTLNKNXKTLTSFLNSIFDKEHYRIALAENEA-KNKLERRELTKQIRQLRNHIKTVL 630
+ E L KN K F N + ++ AE K E + ++ ++ K L
Sbjct: 145 FFEEILGKNSKAFEEF-NCLLHDSSIKLECAEQMIISGKQEMLRIKQEKEEMDQSYKEQL 203
Query: 629 YDNEVTI---DSLKSQVEDSVLDSECSSRYVDNWQVARTEQHLEVINEA-----ENSCIE 474
Y ++ TI +SL Q+EDS+ ++ YVD+ ++ EQ L++ + EN
Sbjct: 204 YASDTTIREKNSLIKQLEDSIEQNKARLLYVDS-RLECMEQELKLKEDVCICLKENLAST 262
Query: 473 TIEQYKLKIEHEQRIHSEVELLT--NITINETLEKIEKWMSKYDRDMEGIDIDMQRKKNH 300
E+ LK+ +E EV+ L+ N +NE L +++ D++ I + + +
Sbjct: 263 ESEKNDLKLRNE-GYTLEVQKLSKDNKELNELLSGFTVKVTELDKEHTSISSHVTQLISS 321
Query: 299 YQDM-----RDKRINFENTIEKHDLLMKQWINFKEEREKARIYRENMTKSAII 156
++ +K + ++ +K + L Q++N E + E + KS II
Sbjct: 322 FERYDGKVHEEKMLMIKSAKDKFEHLQNQYVNLISENNALQTEIEEL-KSRII 373
Score = 35.1 bits (77), Expect = 0.067
Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 8/183 (4%)
Frame = -1
Query: 683 RELTKQIRQLRNHIKTVLYDNEVTIDSLKSQV---EDSVLDSECSSRYVDNWQVARTEQH 513
++L + R NH K L + ++S ++ SVL+ + + ++A+ +Q
Sbjct: 426 QKLLEDSRSAENH-KQELLQKILKLESDNQELLGRVQSVLNEKSNDTESLQGEIAKRDQQ 484
Query: 512 LEVINEAEN---SCIETIEQ-YKLKIEHEQRIHSEVELLTNITINETLEKIEKWMSKYDR 345
+E + N S I+ EQ + +E E+ + E +L ++ T ++ + +YD
Sbjct: 485 VETLENQVNQLCSIIDEKEQLHTCAVEREKNLE-EQKLQVQASLAATESQLTEAKKQYDI 543
Query: 344 DMEGIDIDMQRKKNHYQDMRDKRINFENTIEKHDLLMKQWINF-KEEREKARIYRENMTK 168
+EG I++ + D+ IN K++L + IN KE+ EK EN
Sbjct: 544 MLEGKKIELSKHLKELSLKNDQAIN--EIRRKYELEKVEIINIEKEKAEKLIKEMENKCN 601
Query: 167 SAI 159
I
Sbjct: 602 EKI 604
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 38.3 bits (85), Expect = 0.007
Identities = 39/187 (20%), Positives = 85/187 (45%), Gaps = 2/187 (1%)
Frame = -1
Query: 713 ENEAKNKLER--RELTKQIRQLRNHIKTVLYDNEVTIDSLKSQVEDSVLDSECSSRYVDN 540
+ E +LER E+ K++++ R+H++ + D + D QVED + + ++
Sbjct: 881 QEEYIKRLERDWAEVKKELQEQRDHVRVLTLDKKNAFDGCLKQVEDMRKELQ------NS 934
Query: 539 WQVARTEQHLEVINEAENSCIETIEQYKLKIEHEQRIHSEVELLTNITINETLEKIEKWM 360
W+ A + + EA+ S +ET + K + E+++ + EL E + + +M
Sbjct: 935 WKAATDAESRAAVAEAKCSDLET--KLKSRKENDELFQLKEEL---EKYKEEAQANKSYM 989
Query: 359 SKYDRDMEGIDIDMQRKKNHYQDMRDKRINFENTIEKHDLLMKQWINFKEEREKARIYRE 180
+Y + +++ ++ QD + + + ++E ++ I+ E EK I +
Sbjct: 990 LQYKEIANSNESALKQMESALQDFKTESETIKKSLEDEITKLRTKIS---ELEKCYIMKC 1046
Query: 179 NMTKSAI 159
SAI
Sbjct: 1047 EEAASAI 1053
>03_05_1124 + 30559633-30559674,30559781-30559890,30559973-30560030,
30560455-30560718,30560803-30560940,30561264-30561315,
30561525-30561604,30561929-30561988,30562084-30562164,
30562299-30562376,30563548-30563676,30563896-30564039,
30564145-30564290,30564402-30564558,30564657-30564715,
30564800-30564959,30565054-30565203,30565309-30565445,
30565531-30565677,30565995-30566052,30566417-30566518,
30566590-30566627,30566846-30566972,30567053-30567223,
30567313-30567444,30567575-30567681,30567815-30567875,
30567970-30568147,30568245-30568450,30568781-30568879,
30569021-30569236,30569333-30569472,30569559-30569660,
30569747-30569861,30570129-30570194,30570323-30570480,
30570594-30570690,30570931-30571137,30571435-30571505,
30571648-30571747,30571836-30571892,30571969-30572025,
30572108-30572188,30572319-30572401,30572504-30572651
Length = 1722
Score = 35.1 bits (77), Expect = 0.067
Identities = 44/194 (22%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Frame = -1
Query: 716 AENEAKNKLERR--ELTKQIRQLRNHIKTVLYDNE-VTIDSLKSQVEDSVLDSECSSRYV 546
A EAK+KLE+R ELT ++ + H++ L + + I +LKS +++ + + S +
Sbjct: 1131 ALKEAKDKLEKRVEELTWRL-DVEKHLRIDLEEAKGQEISNLKSVLQE--MQEKLSEAHA 1187
Query: 545 DNWQVARTEQHLEV-INEAENSCIET--IEQYKLKIEHEQRIHSEVELLTNITINETLEK 375
+ + ++ ++ I +A +E ++ K+++ Q E EL+T T E LEK
Sbjct: 1188 ---AIEKEKEDAKLAIEQAPPKIVEVPVVDNAKVELLTRQNKELEDELVTFRTKAEDLEK 1244
Query: 374 IEKWMSKYDRDMEGIDIDMQRKKNHYQDMRDK-RINFENTIEKHDLLMKQWINFKEEREK 198
+ K ++ ++ K N Q+M ++ N + ++ +L +Q + + +K
Sbjct: 1245 RLLEVQKESDELSREILEKDSKLNQLQEMIERLETNLSSLESENQVLRQQSLLASADDDK 1304
Query: 197 ARIYRENMTKSAII 156
++ +K AI+
Sbjct: 1305 SKQIESLESKIAIL 1318
>03_01_0423 +
3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 34.3 bits (75), Expect = 0.12
Identities = 34/178 (19%), Positives = 85/178 (47%), Gaps = 20/178 (11%)
Frame = -1
Query: 728 RIALAENEAKNKLERRELTKQIRQLRNHIKTVLYDNEVTIDSLKSQVED-SVLDSECSSR 552
R +L E + + +I L++ I ++ + + T+ SVL+ E S
Sbjct: 430 RQSLKEQISSESQRANKAESEIHSLKDTISCLISEKDTTLLQYNESTRRLSVLECEISKA 489
Query: 551 YVDNWQVARTEQHLEVIN----EAENSC----IETIEQYKLKIEHEQRIHSEVELLT-NI 399
+++ +++ + +EV E++NS +ET++Q K++++ ++ S E+ + ++
Sbjct: 490 HMELKKLS-DDMAMEVDKLKCAESQNSAMQSELETLDQ-KVRVQEQELEQSRKEIESFHL 547
Query: 398 TINETLEK----------IEKWMSKYDRDMEGIDIDMQRKKNHYQDMRDKRINFENTI 255
++ + + K +EK ++ +++ + +DM+ + D R+N ENT+
Sbjct: 548 SLQDEMAKRKQAEDALCSLEKQYAQSQKEINRLTLDMEMANDRLNDFNLVRLNLENTV 605
>02_03_0314 -
17600970-17600974,17601230-17601357,17601832-17601924,
17602145-17602257,17602520-17602627,17602724-17602828,
17603185-17603355,17603474-17603652,17603741-17603969,
17604841-17604955,17605137-17605312,17606060-17606143,
17606463-17606630,17607011-17607097,17607201-17607323
Length = 627
Score = 33.5 bits (73), Expect = 0.20
Identities = 28/129 (21%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Frame = -1
Query: 569 SECSSRYVDNWQVARTEQHLEVINEAENSCIETIEQYKLKIEHEQRIHSEV-ELLTNITI 393
S ++ D + R + LEVI + + I+ ++LK+E+ Q + + L NI
Sbjct: 199 STLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFRLKLENLQTLKDQAYRLRDNIAQ 258
Query: 392 N-ETLEKIEKWMSKYDRDMEGIDIDMQRKKNHYQDMR--DKRINFENTIEK--HDLLMKQ 228
+ E + ++ M + +++G++ ++R + D+R + IN + L +Q
Sbjct: 259 DQEKSDALKIQMEELRTNVQGVEDKIRRTEKSLADLRRLQQEINSSTSARTTYFTLQQQQ 318
Query: 227 WINFKEERE 201
+ EE E
Sbjct: 319 YAALSEENE 327
>06_01_0449 -
3176135-3176329,3176531-3177289,3177420-3177905,
3178302-3178421,3178637-3178703,3178784-3179007,
3179149-3179234,3179936-3180509
Length = 836
Score = 33.1 bits (72), Expect = 0.27
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Frame = -1
Query: 497 EAENSCIETIEQYKLKIEHEQRIHSEVELLTNITINETLEKIEKWMSKYDRDMEGIDIDM 318
EA + ++ IE +L E S+V+ E+L ++++ + + + +++
Sbjct: 343 EASDERLKRIESERLARTLEDLYLSQVQQRKET--EESLSRVQQEFEQLKIQQDEVTVEL 400
Query: 317 QR----KKNHYQDMRDKRINFENTIEKHDLLMKQWINFKEEREKARIYRENM 174
QR +N + D R +FE + +HD L+++ N E E+ R R M
Sbjct: 401 QRVNEQNENLLGQLSDSREHFEWLLSEHDQLLRERDNAVREVEELRQKRGQM 452
>07_03_1154 - 24402550-24405073,24405909-24406330,24407318-24408856
Length = 1494
Score = 32.3 bits (70), Expect = 0.47
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 686 RRELTKQIRQLRNHIKTVLYDNEVTIDSLKSQVEDS 579
R E KQ++ + H++ + YD E ID K Q+ DS
Sbjct: 571 RDECGKQVKIWKKHVREIAYDIEDCIDEFKHQLGDS 606
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 31.9 bits (69), Expect = 0.62
Identities = 22/120 (18%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Frame = -1
Query: 527 RTEQHLEVINEAENSCIETIEQYKLKIEHEQRIHSEVELLTNI--TINETLEKIEKWMSK 354
R + L++ NE ++ +++ ++ E+ + S E L+ +NE+ +K+E+W +
Sbjct: 340 RRDFDLQLENEKKSFDAMLVQKEADLVQREKDVRSSEEKLSKKEQVLNESKKKLEEWQND 399
Query: 353 YDRDMEGIDIDMQRKKNHYQDMRDKRINFENTIEKHDLLMKQWINFKEE--REKARIYRE 180
D + + +N + + ++++ EN ++ ++ + + K EK +I +E
Sbjct: 400 LDTKSNALKKWEESLQNDEKQLSEQKLQIENERKQAEMYKLELESLKATVVAEKEKILQE 459
>04_04_1144 +
31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 31.1 bits (67), Expect = 1.1
Identities = 37/186 (19%), Positives = 86/186 (46%), Gaps = 10/186 (5%)
Frame = -1
Query: 719 LAENEAKNKLERRELTKQIRQLRNHIKTV---LYDNEVTIDSLKSQVEDSVLDSECSSRY 549
L E + + L + K+ +L ++T + + E I SL+ +++ D +
Sbjct: 197 LEELKDERSLHAAQEAKRASELDKTLETAQLNMKEMEAQISSLQEEIKGHQ-DKAIDHQQ 255
Query: 548 VDNWQVARTEQHLEVINEA---ENSCIETIEQYKLKIEHEQRIHSEVELLTNITINETLE 378
V+ + T L+++ EA S ++ +EQ KL + H EL + + E+L+
Sbjct: 256 VEE-SLRSTLSELKMVQEALELSKSQVDDLEQ-KLASQDANISHLTEELSLHRSSEESLK 313
Query: 377 ----KIEKWMSKYDRDMEGIDIDMQRKKNHYQDMRDKRINFENTIEKHDLLMKQWINFKE 210
K+E +S +++ +++Q + ++ ++ +E T+EK +Q +N +
Sbjct: 314 EKTLKLENELSSAHEELQAKILNLQEMEIKLEEQAKEKQTWEATLEKQ---QEQILNLQT 370
Query: 209 EREKAR 192
E ++++
Sbjct: 371 ELDESK 376
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 31.1 bits (67), Expect = 1.1
Identities = 33/146 (22%), Positives = 68/146 (46%), Gaps = 5/146 (3%)
Frame = -1
Query: 683 RELTKQIRQLRNHIKTVLYDNEVT---IDSLKSQVEDSVLDSECSSRYVDNWQVARTEQH 513
+ L ++ Q ++ + + NE I SL+ Q+E E S+ D + E+
Sbjct: 848 KNLESELEQKQSQVSALEQANEELREKISSLERQLE------EARSKLQDEIIKLQGEKE 901
Query: 512 LEVIN-EAENSCIETIEQYKLKIEHEQRIHSEVELLTNITINETLEKIEKWMSKYDRDME 336
+ N + N+ I+T E+ ++E +QR H+ + L N +++++ +EK +
Sbjct: 902 RALDNLQQSNTSIKTFEE---ELE-KQREHNSILQLANDDLHKSIANLEKELEDTKVSSH 957
Query: 335 GIDIDMQRKKNH-YQDMRDKRINFEN 261
+ +Q +KN D++ I+ EN
Sbjct: 958 AEILALQEQKNKALSDLQQSEISIEN 983
Score = 28.3 bits (60), Expect = 7.7
Identities = 45/206 (21%), Positives = 84/206 (40%), Gaps = 7/206 (3%)
Frame = -1
Query: 788 NKNXKTLTSFLNSIFDKEHYRIALAENEAKNKLERRELTKQIRQLRNHIKTVLYDNEVTI 609
N+N K L + H I L ENE + +++T+ + R+ +K + D E
Sbjct: 245 NENLKLLVETTEREAGESHKTITLMENEIRTLSVEKQVTE---KERDDLKISIVDLENMN 301
Query: 608 DSLKSQVEDSVLDSECSSRYVDNWQVARTEQH--LEVINEAENSCIETIEQYKLKIEHEQ 435
L +Q++++ S ++ Q+A E L I + +N + + EQ
Sbjct: 302 GDLSNQLQETNEKCTFLSSQLEKAQLAEKEVQTLLSEIEKIKNENLMLSRENDNLKACEQ 361
Query: 434 RIHSEVELLTNITINETLEK-----IEKWMSKYDRDMEGIDIDMQRKKNHYQDMRDKRIN 270
+ +E L TI ET + EK + + + G++ID + + M I
Sbjct: 362 NLGTECSQL-KATIAETKAENSTLTEEKHLLESKLKLLGVEIDDLIAEKE-ELMNSMNIE 419
Query: 269 FENTIEKHDLLMKQWINFKEEREKAR 192
E+ ++L+ + E EKA+
Sbjct: 420 RGAAAEEKEMLVSKHSKCLTELEKAQ 445
>08_02_0290 +
15383473-15383669,15385057-15385267,15386389-15386440,
15386545-15386863,15387022-15387121,15387391-15387657,
15387780-15387857,15387943-15388032,15388119-15388168,
15388267-15388366,15388777-15388875,15389023-15389136,
15389238-15389412,15389726-15390132,15390565-15390639,
15391412-15391438
Length = 786
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = -1
Query: 491 ENSCIET--IEQYKLKIEHEQRIHSEVELLTNITINETLEKIEKWMSKYDRDMEGIDIDM 318
++ +ET +++ IE QR+ +V+ L N LEK + +DR ++ I+ D+
Sbjct: 690 DHPAVETFSVDRISPVIERLQRLEGKVDELGNKPPEIPLEKERSLLESWDR-IKCIESDL 748
Query: 317 QRKKNHYQDMRDKRINFENTIEK 249
+R K Q K++ +IE+
Sbjct: 749 ERTKKVLQATVMKQLEIAESIEE 771
>05_01_0170 +
1180168-1180367,1181538-1181598,1181657-1181659,
1182396-1182443,1182979-1184595
Length = 642
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = -1
Query: 470 IEQYKLKIEHEQRIHSEVELLTNITINETLEKIEKWMSKYDRDMEGIDIDMQRKKNHYQD 291
IEQ + +E + + E + T I E +E S+YDR + ++++++ K + +
Sbjct: 371 IEQLRTALEVAEIRYQEEQTRTTIETKTAYEMLENAKSEYDRRVRDLELELKSKNDELTE 430
Query: 290 MR 285
+
Sbjct: 431 AK 432
>01_06_0116 -
26595570-26596607,26596964-26598353,26599386-26599923,
26600562-26601453
Length = 1285
Score = 30.7 bits (66), Expect = 1.4
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 3/139 (2%)
Frame = -1
Query: 599 KSQVEDSVLDSECSSRYVDNWQVARTEQHLEVINEAENSCIETIEQYKLKIEHEQRIHSE 420
K +VE+ V+D D W E HL V ++ ++ KL + R +
Sbjct: 78 KDRVEEMVVDVVS-----DRWNSGVCEDHL-VEKRSKGEVFGPVDVDKLP--EKSRGSGD 129
Query: 419 VELLTNITINETLEKIEKWMSKYDRDMEGIDIDMQRKKN--HYQDMRDKRINFENTIEKH 246
++ + ++ E+ +SK D D D+ R+++ Y+D RD+ + E+
Sbjct: 130 ESKRSSRRMVSMDDRAEEVVSKSDSGKRRSDKDLGRRESSGQYRDDRDRERERDREKERD 189
Query: 245 DLLMKQWINFKE-EREKAR 192
K+W KE ERE+ R
Sbjct: 190 REKEKEWERQKERERERGR 208
>12_02_1286 - 27555143-27555191,27555290-27555511,27555911-27556162,
27556683-27557062,27557202-27557311,27557864-27558033,
27558236-27558444,27558528-27558617,27559125-27559264,
27559356-27559463,27559626-27559716,27560736-27560852,
27561497-27561767,27561892-27562193,27562400-27562469,
27563464-27563702,27564613-27564846,27564943-27565179,
27565276-27565734
Length = 1249
Score = 29.9 bits (64), Expect = 2.5
Identities = 38/198 (19%), Positives = 82/198 (41%), Gaps = 17/198 (8%)
Frame = -1
Query: 791 LNKNXKTLTSFLNSIFDKEHYRIALAENEAKNKLERRELTK--------QIRQLRNHIKT 636
L + ++ + + K HY + + EN + KL R E K ++ ++ ++T
Sbjct: 731 LQRKELAVSEKITGLEKKLHY-LNVEENNLREKLRRLESEKSNIEEEIDRLEPVKEELET 789
Query: 635 VLYDNEVTIDSLKSQVE---DSVLDSECSSRYVDNWQVARTEQ--HLEVINEAENSCIET 471
+ E + L+ ++ D + S V N + Q + + E + S
Sbjct: 790 RIGKKEREVRVLEKKINEIVDRIYKDFSKSVGVKNIREYEERQLKDAQALQERKLSLSNQ 849
Query: 470 IEQYKLKIEHEQRIHSEVELLTNITINETLEK----IEKWMSKYDRDMEGIDIDMQRKKN 303
+ + K ++E+EQ+ + ++ E+LEK +++ S+ + E I M+ K
Sbjct: 850 MSKLKYQLEYEQKRDMQAPIIKLKETRESLEKELKSLQERESEARAEAEQISNQMEELKA 909
Query: 302 HYQDMRDKRINFENTIEK 249
+D + K E I++
Sbjct: 910 EAEDWKSKSDECETGIDE 927
>05_03_0443 +
14057080-14057201,14058566-14058698,14058758-14058797,
14059175-14059398,14059904-14059976,14060364-14060614,
14060892-14061060,14061307-14061611,14062023-14062209,
14062311-14062464,14063186-14063248,14063337-14063433,
14063530-14063619
Length = 635
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = -1
Query: 503 INEAENSCIETIEQYKLKIEHEQRIHSEVELLTNITINETLEKIEKWMSKYDR 345
+ EN ++ ++QY HE++ H +L+ INET + ++K S+ D+
Sbjct: 230 LGNKENVTVQQVKQYCEMESHEEKAH---KLMMQSKINETRDVMKKKASELDK 279
>05_03_0442 +
14040280-14040371,14040449-14040517,14041217-14041329,
14043110-14043209,14044508-14044682,14044768-14044881,
14045157-14045287,14048401-14048464,14048585-14048624,
14049002-14049225,14049634-14049876,14050145-14050313,
14050569-14050873,14051325-14051511,14051622-14051775,
14052145-14052207,14052300-14052396,14052500-14052589
Length = 809
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = -1
Query: 503 INEAENSCIETIEQYKLKIEHEQRIHSEVELLTNITINETLEKIEKWMSKYDR 345
+ EN ++ ++QY HE++ H +L+ INET + ++K S+ D+
Sbjct: 404 LGNKENVTVQQVKQYCEMESHEEKAH---KLMMQSKINETRDVMKKKASELDK 453
>06_02_0083 -
11539955-11540257,11540594-11540742,11540938-11541025,
11541151-11541462,11541554-11541709,11541941-11542156,
11542251-11542508,11542740-11542943,11543052-11543096
Length = 576
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = -1
Query: 470 IEQYKLKIEHEQRIHSEVELLTNITINETLEKIEKWMSKYDRDMEGIDIDMQRKKNHYQD 291
IE +L + E +I E ++ E L+K+E+WMS + E D R N Y
Sbjct: 349 IEPSELIADMESQISKAKE--EALSRKEILDKVERWMSACEE--ESWLEDYNRDDNRYNS 404
Query: 290 MRDKRINFENTIEKHDLLMKQ 228
R +N + EK +L+ +
Sbjct: 405 SRGAHLNLKRA-EKARILVNK 424
>07_01_0165 + 1159821-1161362
Length = 513
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Frame = -1
Query: 509 EVINEAENSCIETIEQYKLKIEHEQRIHS-----EVELLTNITINETLEKIEKWMSKYDR 345
E +N+ + I+ EQ E +R+ E+ L T+ T E + +W K R
Sbjct: 12 ETVNKIISGMIDNYEQKLSADELMERLEMAQIKLELALETSSKWQITSEPLLRWQKKLKR 71
Query: 344 DMEGIDIDMQRKKNHYQDMRDKRINFENT 258
E D +++ + H Q+ +K N+
Sbjct: 72 ATEECDDTLRKCRQHVQEEEEKEQQVRNS 100
>07_03_1773 -
29422660-29422806,29423103-29423201,29423811-29423915,
29423990-29424136,29424436-29424954
Length = 338
Score = 28.7 bits (61), Expect = 5.8
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Frame = -1
Query: 686 RRELTKQIRQLRNHI--KTVLYDNEVTIDSLKSQVEDSVLDSECSSR--------YVDNW 537
RR +T Q ++R I K YD + I + E + + +C + YV
Sbjct: 194 RRRMTPQPHKIRADIDMKCFQYDGVLHIQEAMRKAE-AAGNKDCPVKIKLVAAPLYVLTT 252
Query: 536 QVARTEQHLEVINEAENSCIETIEQYKLKI 447
+ Q + V+N A +C ETIE++K K+
Sbjct: 253 ETLDKHQGISVLNNAIKACGETIEKHKGKL 282
>05_01_0146 - 953957-956278,956468-956786,957185-957213
Length = 889
Score = 28.3 bits (60), Expect = 7.7
Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 7/166 (4%)
Frame = -1
Query: 791 LNKNXKTLTSFLNSIFDKEHYRIALAENEAKNKLERRELTKQIRQLRNHIKTVLYDNEVT 612
L+ L L+S + E + E KN + K + I+ L + E
Sbjct: 273 LSSEVVRLKGLLDSTAESEESKNRETEELVKNLESEVSVLKGKLEEARIIEERLAETEKL 332
Query: 611 IDSLKSQVEDSVLDSECSSRYVDNW--QVARTEQHLEVIN-----EAENSCIETIEQYKL 453
I+ LKS+V D+ + + + W + E LE + + E+ T E K+
Sbjct: 333 IEELKSEVADAKKAESEARQLFEEWKHKAGLLEMELEAVTLSDKFKGESLASTTEELGKI 392
Query: 452 KIEHEQRIHSEVELLTNITINETLEKIEKWMSKYDRDMEGIDIDMQ 315
+ + R SE+E+L T +E + + ++ + E D Q
Sbjct: 393 QSALQDR-ESEIEVLKGKTTALEIE-VARLLADVNESNEQFDASQQ 436
>02_05_0377 + 28408751-28409113,28409545-28410129,28411212-28411385
Length = 373
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = -1
Query: 680 ELTKQIRQLRNHIKTVLYDNEVTIDSLKSQVEDSVLDSECSSRYVDNWQVARTEQHLEVI 501
+L K I L+ TVL+ N T+DSL ++ CS VD+ +A H+ I
Sbjct: 282 QLLKMIAGLQALRLTVLHLNVTTLDSLVLYTLSVKVEEGCSLTTVDD--IAAAVHHVLCI 339
Query: 500 NEAENSCIE 474
+AE + E
Sbjct: 340 VDAEAAASE 348
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,063,985
Number of Sequences: 37544
Number of extensions: 323502
Number of successful extensions: 973
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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