Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11n03
(812 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 34 0.002
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 34 0.002
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 34 0.002
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 34 0.002
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 33 0.002
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 33 0.003
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 33 0.003
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 23 2.5
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 23 4.4
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 33.9 bits (74), Expect = 0.002
Identities = 46/207 (22%), Positives = 79/207 (38%), Gaps = 5/207 (2%)
Frame = -1
Query: 749 IFDKEHYRIALAENEAKNKLERRE-LTKQIRQLRNHIKTVLYDNEVTIDSLKSQVEDSVL 573
IF++E + L N+ E R L I + N KT ++ +SL+S+
Sbjct: 170 IFEREEIKNIL--NKTNEITEHRTVLAVNIEKSENETKTCK-KYAISSNSLRSRSRSFQR 226
Query: 572 DSECSSRYVDNWQVARTEQHLEVINEAENSCI-ETIEQYKLKIEHEQRIHSEVELLTNIT 396
S C SRY D +R E N+ E SC + +YK K ++H N+
Sbjct: 227 TSSCHSRYED----SRHEDRNSYRNDGERSCSRDRSREYKKKDRRYDQLH-------NVE 275
Query: 395 INETLEKIEKWMSKYDRDMEGIDIDMQRKKNHYQDM---RDKRINFENTIEKHDLLMKQW 225
E+ + R+ E +R+ Y++ R + +H ++ +
Sbjct: 276 EKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRERGRSREHRIIPSHY 335
Query: 224 INFKEEREKARIYRENMTKSAIIVQAW 144
I E+ +Y N I+V+ W
Sbjct: 336 I----EQIPVPVYYGNFPPRPIMVRPW 358
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 33.9 bits (74), Expect = 0.002
Identities = 46/207 (22%), Positives = 79/207 (38%), Gaps = 5/207 (2%)
Frame = -1
Query: 749 IFDKEHYRIALAENEAKNKLERRE-LTKQIRQLRNHIKTVLYDNEVTIDSLKSQVEDSVL 573
IF++E + L N+ E R L I + N KT ++ +SL+S+
Sbjct: 170 IFEREEIKNIL--NKTNEITEHRTVLAVNIEKSENETKTCK-KYAISSNSLRSRSRSFQR 226
Query: 572 DSECSSRYVDNWQVARTEQHLEVINEAENSCI-ETIEQYKLKIEHEQRIHSEVELLTNIT 396
S C SRY D +R E N+ E SC + +YK K ++H N+
Sbjct: 227 TSSCHSRYED----SRHEDRNSYRNDGERSCSRDRSREYKKKDRRYDQLH-------NVE 275
Query: 395 INETLEKIEKWMSKYDRDMEGIDIDMQRKKNHYQDM---RDKRINFENTIEKHDLLMKQW 225
E+ + R+ E +R+ Y++ R + +H ++ +
Sbjct: 276 EKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRERGRSREHRIIPSHY 335
Query: 224 INFKEEREKARIYRENMTKSAIIVQAW 144
I E+ +Y N I+V+ W
Sbjct: 336 I----EQIPVPVYYGNFPPRPIMVRPW 358
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 33.9 bits (74), Expect = 0.002
Identities = 46/207 (22%), Positives = 79/207 (38%), Gaps = 5/207 (2%)
Frame = -1
Query: 749 IFDKEHYRIALAENEAKNKLERRE-LTKQIRQLRNHIKTVLYDNEVTIDSLKSQVEDSVL 573
IF++E + L N+ E R L I + N KT ++ +SL+S+
Sbjct: 170 IFEREEIKNIL--NKTNEITEHRTVLAVNIEKSENETKTCK-KYAISSNSLRSRSRSFQR 226
Query: 572 DSECSSRYVDNWQVARTEQHLEVINEAENSCI-ETIEQYKLKIEHEQRIHSEVELLTNIT 396
S C SRY D +R E N+ E SC + +YK K ++H N+
Sbjct: 227 TSSCHSRYED----SRHEDRNSYRNDGERSCSRDRSREYKKKDRRYDQLH-------NVE 275
Query: 395 INETLEKIEKWMSKYDRDMEGIDIDMQRKKNHYQDM---RDKRINFENTIEKHDLLMKQW 225
E+ + R+ E +R+ Y++ R + +H ++ +
Sbjct: 276 EKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRERGRSREHRIIPSHY 335
Query: 224 INFKEEREKARIYRENMTKSAIIVQAW 144
I E+ +Y N I+V+ W
Sbjct: 336 I----EQIPVPVYYGNFPPRPIMVRPW 358
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 33.9 bits (74), Expect = 0.002
Identities = 46/207 (22%), Positives = 79/207 (38%), Gaps = 5/207 (2%)
Frame = -1
Query: 749 IFDKEHYRIALAENEAKNKLERRE-LTKQIRQLRNHIKTVLYDNEVTIDSLKSQVEDSVL 573
IF++E + L N+ E R L I + N KT ++ +SL+S+
Sbjct: 170 IFEREEIKNIL--NKTNEITEHRTVLAVNIEKSENETKTCK-KYAISSNSLRSRSRSFQR 226
Query: 572 DSECSSRYVDNWQVARTEQHLEVINEAENSCI-ETIEQYKLKIEHEQRIHSEVELLTNIT 396
S C SRY D +R E N+ E SC + +YK K ++H N+
Sbjct: 227 TSSCHSRYED----SRHEDRNSYRNDGERSCSRDRSREYKKKDRRYDQLH-------NVE 275
Query: 395 INETLEKIEKWMSKYDRDMEGIDIDMQRKKNHYQDM---RDKRINFENTIEKHDLLMKQW 225
E+ + R+ E +R+ Y++ R + +H ++ +
Sbjct: 276 EKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRERGRSREHRIIPSHY 335
Query: 224 INFKEEREKARIYRENMTKSAIIVQAW 144
I E+ +Y N I+V+ W
Sbjct: 336 I----EQIPVPVYYGNFPPRPIMVRPW 358
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 33.5 bits (73), Expect = 0.002
Identities = 48/205 (23%), Positives = 82/205 (40%), Gaps = 3/205 (1%)
Frame = -1
Query: 749 IFDKEHYRIALAENEAKNKLERRE-LTKQIRQLRNHIKTVLYDNEVTIDSLKSQVEDSVL 573
IF++E + L N+ E R L I + N KT ++ +SL+S+
Sbjct: 170 IFEREEIKNIL--NKTNEITEHRTVLAVNIEKSENETKTCK-KYAISSNSLRSRSRSFQR 226
Query: 572 DSECSSRYVDNWQVARTEQHLEVINEAENSCI-ETIEQYKLKIEHEQRIHSEVELLTNIT 396
S C SRY D +R E N+ E SC + +YK ++Q + E + L T
Sbjct: 227 TSSCHSRYED----SRHEDRNSYRNDGERSCSRDRSREYKKDRRYDQLHNVEEKHLRERT 282
Query: 395 INETLEKI-EKWMSKYDRDMEGIDIDMQRKKNHYQDMRDKRINFENTIEKHDLLMKQWIN 219
+ E+ Y + E + ++ + RD+R +H ++ +I
Sbjct: 283 SRRRYSRSREREQKSYKNERE----YREYRETSRERSRDRR--GRGRSREHRIIPSHYI- 335
Query: 218 FKEEREKARIYRENMTKSAIIVQAW 144
E+ A +Y N I+V+ W
Sbjct: 336 ---EQIPAPVYYGNFPPRPIMVRPW 357
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 33.1 bits (72), Expect = 0.003
Identities = 46/207 (22%), Positives = 78/207 (37%), Gaps = 5/207 (2%)
Frame = -1
Query: 749 IFDKEHYRIALAENEAKNKLERRE-LTKQIRQLRNHIKTVLYDNEVTIDSLKSQVEDSVL 573
IF++E + L N+ E R L I + N KT ++ +SL+S+
Sbjct: 170 IFEREEIKNIL--NKTNEITEHRTVLAVNIEKSENETKTCK-KYAISSNSLRSRSRSFQR 226
Query: 572 DSECSSRYVDNWQVARTEQHLEVINEAENSCI-ETIEQYKLKIEHEQRIHSEVELLTNIT 396
S C SRY D R E N+ E SC + +YK K ++H N+
Sbjct: 227 TSSCHSRYED----LRHEDRNSYRNDGERSCSRDRSREYKKKDRRYDQLH-------NVE 275
Query: 395 INETLEKIEKWMSKYDRDMEGIDIDMQRKKNHYQDM---RDKRINFENTIEKHDLLMKQW 225
E+ + R+ E +R+ Y++ R + +H ++ +
Sbjct: 276 EKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRERGRSREHRIIPSHY 335
Query: 224 INFKEEREKARIYRENMTKSAIIVQAW 144
I E+ +Y N I+V+ W
Sbjct: 336 I----EQIPVPVYYGNFPPRPIMVRPW 358
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 33.1 bits (72), Expect = 0.003
Identities = 46/207 (22%), Positives = 79/207 (38%), Gaps = 5/207 (2%)
Frame = -1
Query: 749 IFDKEHYRIALAENEAKNKLERRE-LTKQIRQLRNHIKTVLYDNEVTIDSLKSQVEDSVL 573
IF++E + L N+ E R L I + N KT ++ +SL+S+
Sbjct: 170 IFEREEIKNIL--NKTNEITEHRTVLAVNIEKSENETKTCK-KYAISSNSLRSRSRSFQR 226
Query: 572 DSECSSRYVDNWQVARTEQHLEVINEAENSCI-ETIEQYKLKIEHEQRIHSEVELLTNIT 396
S C SRY D +R E N+ E SC + +YK K ++H N+
Sbjct: 227 TSSCHSRYED----SRHEDGNSYRNDGERSCSRDRSREYKKKDRRYDQLH-------NVE 275
Query: 395 INETLEKIEKWMSKYDRDMEGIDIDMQRKKNHYQDM---RDKRINFENTIEKHDLLMKQW 225
E+ + R+ E +R+ Y++ R + +H ++ +
Sbjct: 276 EKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRERGRSREHRIIPSHY 335
Query: 224 INFKEEREKARIYRENMTKSAIIVQAW 144
I E+ +Y N I+V+ W
Sbjct: 336 I----EQIPVPVYYGNFPPRPIMVRPW 358
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -1
Query: 623 NEVTIDSLKSQVEDSVLDSECSSRYVDNWQV 531
NE+ + V+D L + Y+DNW++
Sbjct: 288 NEILLSDELDSVDDRTLRLKGQMIYMDNWKM 318
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 22.6 bits (46), Expect = 4.4
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -1
Query: 368 KWMSKYDRDMEGID 327
+W+ +YDR++E D
Sbjct: 293 QWLREYDRELEDFD 306
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,021
Number of Sequences: 438
Number of extensions: 4298
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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