Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte11m16
         (453 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094886-1|AAM11239.1|  562|Drosophila melanogaster RE53130p pro...    28   6.8  
AL132792-1|CAB65848.1| 2224|Drosophila melanogaster EG:BACR19J1....    28   6.8  
AF522076-1|AAM90976.1|  562|Drosophila melanogaster LOBE protein.      28   6.8  
AE014298-97|AAN09029.4| 2224|Drosophila melanogaster CG5227-PD, ...    28   6.8  
AE014298-96|AAF45541.5| 2224|Drosophila melanogaster CG5227-PB, ...    28   6.8  
AE014298-95|AAN09027.4| 2224|Drosophila melanogaster CG5227-PA, ...    28   6.8  
AE014298-94|AAN09028.5| 2232|Drosophila melanogaster CG5227-PC, ...    28   6.8  
AE013599-1899|AAF58241.1|  562|Drosophila melanogaster CG10109-P...    28   6.8  
AE014297-4158|AAF56734.3| 3298|Drosophila melanogaster CG18437-P...    27   8.9  

>AY094886-1|AAM11239.1|  562|Drosophila melanogaster RE53130p
           protein.
          Length = 562

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +2

Query: 113 RIPHIPRAILEIYRSPRLSKKPSCALLFKVSSAFPTKA 226
           RI    R   ++  S R      CALLFKV  A P +A
Sbjct: 221 RIERYTRTQFQLLNSFREKSDQDCALLFKVIRALPEQA 258


>AL132792-1|CAB65848.1| 2224|Drosophila melanogaster
           EG:BACR19J1.1,FBgn0021764;sdk protein.
          Length = 2224

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +1

Query: 103 RRSAHPAYTTGYFRNIPLSAFVQEAKLCTPLQSFLG 210
           +RS + ++T G+  N P+S F+ + +  + L+ F+G
Sbjct: 657 QRSINVSWTPGFDGNSPISKFIIQRREVSELEKFVG 692


>AF522076-1|AAM90976.1|  562|Drosophila melanogaster LOBE protein.
          Length = 562

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +2

Query: 113 RIPHIPRAILEIYRSPRLSKKPSCALLFKVSSAFPTKA 226
           RI    R   ++  S R      CALLFKV  A P +A
Sbjct: 221 RIERYTRTQFQLLNSFREKSDQDCALLFKVIRALPEQA 258


>AE014298-97|AAN09029.4| 2224|Drosophila melanogaster CG5227-PD,
           isoform D protein.
          Length = 2224

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +1

Query: 103 RRSAHPAYTTGYFRNIPLSAFVQEAKLCTPLQSFLG 210
           +RS + ++T G+  N P+S F+ + +  + L+ F+G
Sbjct: 657 QRSINVSWTPGFDGNSPISKFIIQRREVSELEKFVG 692


>AE014298-96|AAF45541.5| 2224|Drosophila melanogaster CG5227-PB,
           isoform B protein.
          Length = 2224

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +1

Query: 103 RRSAHPAYTTGYFRNIPLSAFVQEAKLCTPLQSFLG 210
           +RS + ++T G+  N P+S F+ + +  + L+ F+G
Sbjct: 657 QRSINVSWTPGFDGNSPISKFIIQRREVSELEKFVG 692


>AE014298-95|AAN09027.4| 2224|Drosophila melanogaster CG5227-PA,
           isoform A protein.
          Length = 2224

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +1

Query: 103 RRSAHPAYTTGYFRNIPLSAFVQEAKLCTPLQSFLG 210
           +RS + ++T G+  N P+S F+ + +  + L+ F+G
Sbjct: 657 QRSINVSWTPGFDGNSPISKFIIQRREVSELEKFVG 692


>AE014298-94|AAN09028.5| 2232|Drosophila melanogaster CG5227-PC,
           isoform C protein.
          Length = 2232

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +1

Query: 103 RRSAHPAYTTGYFRNIPLSAFVQEAKLCTPLQSFLG 210
           +RS + ++T G+  N P+S F+ + +  + L+ F+G
Sbjct: 657 QRSINVSWTPGFDGNSPISKFIIQRREVSELEKFVG 692


>AE013599-1899|AAF58241.1|  562|Drosophila melanogaster CG10109-PA
           protein.
          Length = 562

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +2

Query: 113 RIPHIPRAILEIYRSPRLSKKPSCALLFKVSSAFPTKA 226
           RI    R   ++  S R      CALLFKV  A P +A
Sbjct: 221 RIERYTRTQFQLLNSFREKSDQDCALLFKVIRALPEQA 258


>AE014297-4158|AAF56734.3| 3298|Drosophila melanogaster CG18437-PA
            protein.
          Length = 3298

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 71   LTIXRVVFAYTDALRIPHIPRAILEI 148
            + + RVVF + + +++P  PR  LE+
Sbjct: 2237 MVVQRVVFLHEELMKLPSFPRKALEV 2262


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,199,471
Number of Sequences: 53049
Number of extensions: 401307
Number of successful extensions: 908
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1476622287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)