Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11m13
(765 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 43 6e-05
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 41 2e-04
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 40 3e-04
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 39 7e-04
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 39 9e-04
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 38 0.001
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 34 0.026
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 34 0.026
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 34 0.026
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 33 0.045
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 32 0.078
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 31 0.24
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 31 0.24
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 0.24
SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces pomb... 30 0.31
SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr 3|||... 30 0.31
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 30 0.31
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 30 0.31
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 30 0.42
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 30 0.42
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 29 0.96
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 29 0.96
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 28 1.7
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 28 1.7
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 28 1.7
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 27 2.2
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 27 2.2
SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual 27 2.2
SPCC553.09c |spb70|pol12|DNA polymerase alpha B-subunit|Schizosa... 27 2.9
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 27 2.9
SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomy... 27 2.9
SPAC664.03 |||RNA polymerase II associated Paf1 complex |Schizos... 26 5.1
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.1
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 26 5.1
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 5.1
SPCC1620.10 |cwf26||complexed with Cdc5 protein Cwf26 |Schizosac... 26 5.1
SPAC1071.02 |||TFIIH regulator |Schizosaccharomyces pombe|chr 1|... 26 6.8
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 26 6.8
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 26 6.8
SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces pomb... 26 6.8
SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyce... 25 9.0
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 25 9.0
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 25 9.0
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 42.7 bits (96), Expect = 6e-05
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 11/206 (5%)
Frame = -2
Query: 659 EQLARELNCAREKVHVLLHNSLKPPEKPPERGGDEKQMALLNQRISQLAENNISLKSEIE 480
+ L + N + + L S + E + D+ Q+ LN+RIS A+ S++S I
Sbjct: 792 DNLGNKENIISDLKNKLSEESTRLQELQSQLNQDKNQIETLNERISAAADELSSMES-IN 850
Query: 479 RLKASVIRTEESALANEKRLQEKMHECAQLGGELDRTRDEASRALQRAHEQTETVRKCLQ 300
+ +A+ ++ + +N LQEK++ +L E + L+ A + T+ K L+
Sbjct: 851 KNQANELKLAKQKCSN---LQEKINFGNKLAKEHTEKISSLEKDLEAATKTASTLSKELK 907
Query: 299 TTVAELERQLAAS----RAQVSTAEKEREELKNRLHWQMKRLT---ENFEQAQLRILGLQ 141
T +E + + S + S ++ +E+ L ++L E E+ ++ I+GLQ
Sbjct: 908 TVKSENDSLKSVSNDDQNKEKSVNNEKFKEVSQALAEANEKLNARDEEIERLKVDIIGLQ 967
Query: 140 T---QVQSLRRTASST-GDGDGENQE 75
+QSL+ + + T D + +N+E
Sbjct: 968 NASLNMQSLKDSDNRTISDLESKNKE 993
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 41.1 bits (92), Expect = 2e-04
Identities = 46/221 (20%), Positives = 91/221 (41%)
Frame = -2
Query: 752 QELAPIPDLLKAXQMRLKDAQQAQAIAEHNAEQLARELNCAREKVHVLLHNSLKPPEKPP 573
+ LA I D + + ++ Q+ A + +L EL KV LL + EK
Sbjct: 887 ERLANIEDSFSETKQQNENLQRESASLKQINNELESELLEKTSKVETLLSEQNELKEK-- 944
Query: 572 ERGGDEKQMALLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQ 393
+EK + + L ENN ++ SE +E+ + + L + +
Sbjct: 945 -LSLEEKDLLDTKGELESLRENNATVLSEKAEFNEQCKSLQETIVTKDAELDKLTKYISD 1003
Query: 392 LGGELDRTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRAQVSTAEKEREELKN 213
E+ R + +++ +Q ++ + L+ V +LER+ + + VS ++++EEL +
Sbjct: 1004 YKTEIQEMRLTNQKMNEKSIQQEGSLSESLK-RVKKLERENSTLISDVSILKQQKEEL-S 1061
Query: 212 RLHWQMKRLTENFEQAQLRILGLQTQVQSLRRTASSTGDGD 90
L + N E+ + Q+ L++ S D D
Sbjct: 1062 VLKGVQELTINNLEEKVNYLEADVKQLPKLKKELESLNDKD 1102
Score = 30.7 bits (66), Expect = 0.24
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Frame = -2
Query: 494 KSEIERLKASVIRTEESALANEKRLQEKMHECAQLGGELDRTRDEASR---ALQRAHEQT 324
KSE+ER ++ T S A E L + L RT++ + + +Q
Sbjct: 847 KSEVER---DLVETNNSLTAVENLLTTERAIALDKEEILRRTQERLANIEDSFSETKQQN 903
Query: 323 ETVRK---CLQTTVAELERQLAASRAQVSTAEKEREELKNRLHWQMKRLTE 180
E +++ L+ ELE +L ++V T E+ ELK +L + K L +
Sbjct: 904 ENLQRESASLKQINNELESELLEKTSKVETLLSEQNELKEKLSLEEKDLLD 954
Score = 30.7 bits (66), Expect = 0.24
Identities = 31/151 (20%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Frame = -2
Query: 554 KQMALLNQRISQLAENNISLKSEIERLKASV--IRTEESALAN-EKRLQEKMHECAQLGG 384
+Q A +++S + N L +++ L V + + S + E+++ MHE +QLG
Sbjct: 1210 RQSASYKEKLSLASSENKDLSNKVSSLTKQVNELSPKASKVPELERKITNLMHEYSQLGK 1269
Query: 383 ELDRTRDEASRAL--QRAHEQTETVRKCLQTTVAELERQLAASRAQVSTAEKEREE---L 219
+ DE +AL R +E+ +++ L++ +LE + +V T R E L
Sbjct: 1270 TFE---DEKRKALIASRDNEELRSLKSELESK-RKLEVEYQKVLEEVKTTRSLRSEVTLL 1325
Query: 218 KNRLHWQMKRLTENFEQAQLRILGLQTQVQS 126
+N++ + + + +++++ + ++ S
Sbjct: 1326 RNKVA-DHESIRSKLSEVEMKLVDTRKELNS 1355
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 40.3 bits (90), Expect = 3e-04
Identities = 29/118 (24%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Frame = -2
Query: 557 EKQMALLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLGGEL 378
++++ N+ ++ N +++ EIE LK S + +ESA ++ +++ ++ E QL E
Sbjct: 1436 KQELTNKNKELTSKNAENEAMQKEIESLKDSNHQLQESASSDAEQITKEQFE--QLKSEK 1493
Query: 377 DRTRDE-ASRALQRAHEQTETVRKCLQTTVAELERQLAASRAQVSTAEKEREELKNRL 207
+RT E A + H Q+E V +T ++ LE+++ R+ ++ + L L
Sbjct: 1494 ERTEKELADSKNELEHLQSEAVDADGKTEISNLEKEIHELRSDKEGLVQQVQNLSAEL 1551
Score = 39.9 bits (89), Expect = 4e-04
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Frame = -2
Query: 572 ERGGDEKQMALLNQRISQLAENNISL--KSEIERLKASV--IRTEESALANEKRLQEKMH 405
E+ EK++A + L + K+EI L+ + +R+++ L + +Q
Sbjct: 1492 EKERTEKELADSKNELEHLQSEAVDADGKTEISNLEKEIHELRSDKEGLVQQ--VQNLSA 1549
Query: 404 ECAQLGGELDRTRDEASRA--LQRAHEQTETVRKCLQTTVAELERQLAASRAQ-VSTAEK 234
E A L E T+ A + R Q E+ ++ + E E ++ A+R++ V+ EK
Sbjct: 1550 ELAALR-EHSPTQGSLENADEIARLRSQLESTKQYYEK---EKETEILAARSELVAEKEK 1605
Query: 233 EREELKNRLHWQMKRLTENFEQAQ 162
+EEL+N+L+ + +R+ E EQAQ
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQ 1629
Score = 35.9 bits (79), Expect = 0.006
Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 16/185 (8%)
Frame = -2
Query: 713 QMRLKDAQQAQAIAEHNAEQLARELNCAREKVHVLLHN--SLKPPEKPPERGGDEKQMAL 540
+ L+ Q +I E+N L+REL +K+ + LH SL+ + + +
Sbjct: 189 EFELQKLTQKNSILENNNTWLSRELQGVNDKL-LSLHQEASLEKSQLSSQLSDAVLEKDA 247
Query: 539 LNQRIS----QLAENNISLKSEIERLKASVIRTEESALANEKRL----------QEKMHE 402
L +++S Q E+N+ ++ + L + E S ++ EK + EK +
Sbjct: 248 LQRKVSSLSQQFTESNLRYQNIVAELSEMRKQYEFSQVSFEKEISSQKQISELWMEKCED 307
Query: 401 CAQLGGELDRTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRAQVSTAEKEREE 222
C+ EL + E + L+ A E + + A L+ Q+ +VS+ E + +
Sbjct: 308 CSLRLKELQNSNGELEKLLEAAQSSFEEQLESHKEAEASLKSQINFLEKEVSSLESQLKL 367
Query: 221 LKNRL 207
RL
Sbjct: 368 ANERL 372
Score = 31.1 bits (67), Expect = 0.18
Identities = 38/203 (18%), Positives = 80/203 (39%)
Frame = -2
Query: 749 ELAPIPDLLKAXQMRLKDAQQAQAIAEHNAEQLARELNCAREKVHVLLHNSLKPPEKPPE 570
EL + L+ ++ + QQ +E E + N E+ L+ + + E+ +
Sbjct: 951 ELERTKEKLRMAELEKSNIQQKYLASEKTLEMM----NETHEQFKHLVESEISTREE--K 1004
Query: 569 RGGDEKQMALLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQL 390
++ LN+R+ L E S E+ + +R ++SAL+ +K
Sbjct: 1005 ITSLRSELLDLNKRVEVLKEEKESSSKELAKQLEDAVREKDSALSFKK------------ 1052
Query: 389 GGELDRTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRAQVSTAEKEREELKNR 210
+ ++ R +A R + E E R ++ + E ++ + R E +
Sbjct: 1053 --DYEKIRSDADRVITSLKEDIEKERSLMKECHSNYESEIVSHGRTTQKLRDLRTEF-DE 1109
Query: 209 LHWQMKRLTENFEQAQLRILGLQ 141
++ + +L NFEQ + G +
Sbjct: 1110 VNTKYLKLKANFEQQHSGLSGAE 1132
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 39.1 bits (87), Expect = 7e-04
Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Frame = -2
Query: 560 DEKQMALLNQRISQLAENNISLKSEIERLKASVIRT-------EESALANEKRLQEKMHE 402
++K ++I+ L E LK EIERL+A R E+ A E+ +E +E
Sbjct: 137 EQKIQEEFERQITDLLEEQQQLKLEIERLEAETERANSETEQYEKQKEALEEEYEELRNE 196
Query: 401 C----AQLGGE---LDRTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRAQVST 243
C QL E L T +E R L + + K L+ ++ + +
Sbjct: 197 CLKHDPQLDAEIRTLQDTFEEVERTLTKQVSDAKIADKPLKDSMFNSNSEKEKIMHALEK 256
Query: 242 AEKEREELKNRLHWQMKRLTENFEQAQLRILGLQTQVQSLRRTASSTGDGDGEN 81
AEK+ + + M++L + E++ I Q ++ + + + D D ++
Sbjct: 257 AEKDADIYSEFIQQYMEQLESSLEKSSTAIENAQNRLAEMTAHLAESSDYDNDD 310
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 38.7 bits (86), Expect = 9e-04
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Frame = -2
Query: 488 EIERLKASVIRTEESALANEKRLQEKMHECAQLGGEL-DRTR--DEASRALQRAHEQTET 318
EIE+ + ++ EES ++ +++ E QL D+ DE + LQ E+
Sbjct: 579 EIEKFEKTIRENEESISLFKEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEENNK 638
Query: 317 VRKCLQTTVAELERQLAASRAQVSTAEKEREELKNRLHWQMKRLTENFEQAQLRILGLQT 138
++ + + L QL + A+V + KE EE K + + L ++ + L L
Sbjct: 639 AKEDSTSKTSNLLEQLKMTEAEVDSLRKENEENKQVIALKESELVKSNDNKLL----LNE 694
Query: 137 QVQSL 123
Q++SL
Sbjct: 695 QIESL 699
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 38.3 bits (85), Expect = 0.001
Identities = 35/144 (24%), Positives = 57/144 (39%), Gaps = 10/144 (6%)
Frame = -2
Query: 524 SQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQL---GGELDRTRDEAS 354
SQL + SLK + +A R SA + +++E +++ L E DR E
Sbjct: 449 SQLKDEITSLKQTVSESEAERKRLFSSAQEKQLQMKETVNKLTSLQEQNNEFDRQLKEQE 508
Query: 353 RALQRAHEQTETVRKCLQTTVAE------LERQLAASRAQVSTA-EKEREELKNRLHWQM 195
LQ E+ +RK L+ + L QL R + A E L + Q+
Sbjct: 509 EDLQNKEEELTELRKLLREQTQDSQKLRLLVEQLELERQDLKQAGENHYSNLSSDYETQI 568
Query: 194 KRLTENFEQAQLRILGLQTQVQSL 123
K L + +Q + Q ++ L
Sbjct: 569 KSLESSLTNSQAECVSFQEKINEL 592
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 33.9 bits (74), Expect = 0.026
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Frame = -2
Query: 467 SVIRTEESALAN-EKRLQEKMHECAQLGGELDRTRDEASRALQRAHEQTETVRKCLQTTV 291
S T+ LA+ E +L+ ++ + E +R + E R L HEQ + LQ +
Sbjct: 48 SANETKNPKLASLEFQLENLKNDLKRKELEFEREQIELQRKLAEEHEQ----KNSLQLRL 103
Query: 290 AELERQLAASRAQVSTAEKEREELKNRLHWQMKRLTENFEQAQLRILGLQTQVQ 129
+E+QL Q ++ +KE EE++N ++ E + I L+TQ++
Sbjct: 104 TLVEKQL---EEQSTSYQKEIEEVRNEKEATQVKIHELLDAKWKEIAELKTQIE 154
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 33.9 bits (74), Expect = 0.026
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 6/172 (3%)
Frame = -2
Query: 707 RLKDAQQAQA-----IAEHNAEQLARELNCAREKVHVLLHNSLKPPEKPPERGGDEKQMA 543
R K AQQ QA I E N + REL REK + +K + +E++
Sbjct: 561 REKVAQQRQAKLLEEIEEENKRKQERELKKIREK------EKKRDKKKQLKLAKEEERQ- 613
Query: 542 LLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLGGELDRTRD 363
+ +LAE E +R + + + EE L E+ ++K E + E + +
Sbjct: 614 --RREAERLAEQAAQKALEAKRQEEARKKREEQRLKREQ--EKKQQELERQKREEKQKQK 669
Query: 362 EASRALQRAHEQTETVRKCLQTTV-AELERQLAASRAQVSTAEKEREELKNR 210
E + L++ ++ + + + + E E+++ R + +KE EE + R
Sbjct: 670 EREKKLKKQQQEADREKMAREQRLREEEEKRILEERKRREKLDKEEEERRRR 721
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 33.9 bits (74), Expect = 0.026
Identities = 38/185 (20%), Positives = 76/185 (41%), Gaps = 3/185 (1%)
Frame = -2
Query: 665 NAEQLARELNCAREKVHVLLHNSLKPPEKPPERGGDEKQMALLNQRISQLAENNISLKSE 486
NAE+ A A EKV + HN L D++ + N + + + N SL
Sbjct: 634 NAEKNAALCEAALEKVPLAKHNKLSDGTFSTP---DKENVQSTND--AHIMQENFSLHKA 688
Query: 485 IERLKASVIRTEESALANEKRLQEKMHECAQLGGELDRTRDEASRALQRAHEQTETVRKC 306
+E ++ + ++ +E + + + EL R E A+ + ++ E++ +
Sbjct: 689 LEVMRETSSDLDKQLKDATASQKELIVQTSSFQKELVEER-ERHNAISKRLQEIESLYRD 747
Query: 305 LQTTVAELERQLAASRAQVSTAEKEREELKNR---LHWQMKRLTENFEQAQLRILGLQTQ 135
+ V LE QL ++ ER++ + R +K LT E + + L
Sbjct: 748 RELLVTNLEDQLVDQTVTINKFAFERDQFRERSMGFENTIKDLTRKMEATDMLNVSLHES 807
Query: 134 VQSLR 120
++S++
Sbjct: 808 LRSVQ 812
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 33.1 bits (72), Expect = 0.045
Identities = 25/107 (23%), Positives = 46/107 (42%)
Frame = -2
Query: 533 QRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLGGELDRTRDEAS 354
Q+I+ + K EI+R+ A + + A R+Q K H L + D+ +
Sbjct: 497 QKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNH-LESYAYSLRNSLDDPN 555
Query: 353 RALQRAHEQTETVRKCLQTTVAELERQLAASRAQVSTAEKEREELKN 213
+ ETV K ++ T+ L+ A++ + +KE E + N
Sbjct: 556 LKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVAN 602
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 32.3 bits (70), Expect = 0.078
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 266 PPAVVPALLPWFGGTSAQFPFAR-GLSAAPARPRPWCGPTLPQA 394
PP A TS+ P+A+ SAAP+ P PW P PQ+
Sbjct: 406 PPPWAAASTSVSSSTSSPAPWAKPASSAAPSNPAPWQQPAAPQS 449
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 30.7 bits (66), Expect = 0.24
Identities = 27/140 (19%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Frame = -2
Query: 551 QMALLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLGGELDR 372
++ LNQR ++++E S + EI +L+ V + E+R+ + + + +R
Sbjct: 831 ELESLNQRFTEISERIPSAELEISKLQLDVSACDRLVAGEERRILQLKSDLKSIRNNNER 890
Query: 371 TR---------DEASRALQRAHEQTETVRKCLQTTVAELER-QLAASRAQVSTAEKEREE 222
R D+ A+ +E T K LQ + E+ + +++V ++ +
Sbjct: 891 KRNLQNKISNMDKEVEAININNEGLVTEIKTLQDKIMEIGGIRYRIQKSKVDDLHEQLKF 950
Query: 221 LKNRLHWQMKRLTENFEQAQ 162
+K++L+ + +N +++Q
Sbjct: 951 VKDKLNKMSFKKKKNEQRSQ 970
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 30.7 bits (66), Expect = 0.24
Identities = 26/128 (20%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Frame = -2
Query: 533 QRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLGGELDRTRDEAS 354
QR+SQL ++ +E++ LK + ++E L +L K+ + + EL+ + + S
Sbjct: 457 QRLSQLLISSQPALTEVKHLKLCLSDSQEELL----QLNAKLEKANIVIDELNSAKLKLS 512
Query: 353 RALQRAHEQTETVRKCLQTTVAELERQLAASRAQV-STAEKEREELKNRLHWQMKRLTEN 177
+ ++ + + + Q ++E +++ S KE E LK + + L E
Sbjct: 513 KQVEEESSMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQ 572
Query: 176 FEQAQLRI 153
+ A++++
Sbjct: 573 LKTARMKL 580
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 30.7 bits (66), Expect = 0.24
Identities = 30/148 (20%), Positives = 66/148 (44%), Gaps = 3/148 (2%)
Frame = -2
Query: 551 QMALLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLGG---E 381
Q+ ++S + N SLK I+ + ++ ++ +L+E A G E
Sbjct: 386 QLTDAESKLSSFEQENKSLKGSIDEYQNNLSSKDKMVKQVSSQLEEARSSLAHATGKLAE 445
Query: 380 LDRTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRAQVSTAEKEREELKNRLHW 201
++ RD ++ ++ + + +R CL ++ EL+ + A + RE++K
Sbjct: 446 INSERDFQNKKIKDFEKIEQDLRACLNSSSNELKEKSALIDKKDQELNNLREQIK----- 500
Query: 200 QMKRLTENFEQAQLRILGLQTQVQSLRR 117
+ K+++E+ Q+ +QSL+R
Sbjct: 501 EQKKVSES----------TQSSLQSLQR 518
Score = 29.5 bits (63), Expect = 0.55
Identities = 34/174 (19%), Positives = 70/174 (40%), Gaps = 19/174 (10%)
Frame = -2
Query: 560 DEKQMALLN--QRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLG 387
D+K L + +++ L + + S +E +K+ + +E +E +QE HE
Sbjct: 1470 DDKSFELASAVEKLGALQKLHSESLSLMENIKSQLQEAKEKIQVDESTIQELDHEITASK 1529
Query: 386 GELD---RTRDEASRALQRAHEQTETV----RKCLQTTVAELERQLAASRAQVSTAEKER 228
+ +D R L EQ + + ++ E E ++ ++++ E +
Sbjct: 1530 NNYEGKLNDKDSIIRDLSENIEQLNNLLAEEKSAVKRLSTEKESEILQFNSRLADLEYHK 1589
Query: 227 EELKNRLHWQMKRLTENFEQAQL----------RILGLQTQVQSLRRTASSTGD 96
++++ L +L E+ QL R+L LQ QV+ L S +
Sbjct: 1590 SQVESELGRSKLKLASTTEELQLAENERLSLTTRMLDLQNQVKDLSNIKDSLSE 1643
Score = 27.5 bits (58), Expect = 2.2
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Frame = -2
Query: 713 QMRLKDAQQAQAIAEHNAEQLARELNCAREKVHVLLHNSLKPPEKPPERGGDEKQMALLN 534
Q +L + + + + A L+R+L EK L EK E+ ++ ++ +
Sbjct: 186 QKKLTNMESNFSAKQSEAYDLSRQLLTVTEK--------LDKKEKDYEK--IKEDVSSIK 235
Query: 533 QRISQLAENNISLKSEIERLKASVI----------RTEESALANEKRLQEKMHECA 396
+++ +N SL+ E ERL+ ++ +TE S A K LQEK+ +CA
Sbjct: 236 ASLAEEQASNKSLRGEQERLEKLLVSSNKTVSTLRQTENSLRAECKTLQEKLEKCA 291
>SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 323
Score = 30.3 bits (65), Expect = 0.31
Identities = 16/86 (18%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = -2
Query: 557 EKQMALLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLGGEL 378
+ +M + ++++ + +K E RL + E+ A + ++++ + Q +
Sbjct: 141 QNEMTSMKGEMAEMKVEMVEMKRETIRLNTRIDLLEQKTEARFQSIEQRFNSIDQRFNSI 200
Query: 377 DRTRDEASRALQRAHEQTETV--RKC 306
DR D + L ++ ET+ R C
Sbjct: 201 DRRFDSMEQRLDSMDQKMETIDARSC 226
>SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 247
Score = 30.3 bits (65), Expect = 0.31
Identities = 16/86 (18%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = -2
Query: 557 EKQMALLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLGGEL 378
+ +M + ++++ + +K E RL + E+ A + ++++ + Q +
Sbjct: 141 QNEMTSMKGEMAEMKVEMVEMKRETIRLNTRIDLLEQKTEARFQSIEQRFNSIDQRFNSI 200
Query: 377 DRTRDEASRALQRAHEQTETV--RKC 306
DR D + L ++ ET+ R C
Sbjct: 201 DRRFDSMEQRLDSMDQKMETIDARSC 226
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 30.3 bits (65), Expect = 0.31
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = -2
Query: 452 EESALANEKRLQEKMHECAQLGGEL-DRTRDEASRAL---QRAHEQTETVRKCLQTTVAE 285
E L EK+L E++ + +L DR E+ +A Q+A EQ E +RK L+ +A+
Sbjct: 371 ESQLLKREKQLSEELAKLRSTNAQLTDRITQESKKASFLEQKASEQEEVIRK-LEKDLAD 429
Query: 284 LE 279
++
Sbjct: 430 VD 431
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 30.3 bits (65), Expect = 0.31
Identities = 24/111 (21%), Positives = 54/111 (48%)
Frame = -2
Query: 482 ERLKASVIRTEESALANEKRLQEKMHECAQLGGELDRTRDEASRALQRAHEQTETVRKCL 303
E L+ +++ + S R +EK+ + ++ + ++E R +E TV+K L
Sbjct: 300 ESLRRALVLIQGSCTEKILRFKEKILDLLEM-----KQQEENDRISHIEYENDLTVKK-L 353
Query: 302 QTTVAELERQLAASRAQVSTAEKEREELKNRLHWQMKRLTENFEQAQLRIL 150
+ ++ELE + ++ S +EKE EE + L +++ + + ++L
Sbjct: 354 KRRISELEMAVKEYESEKSYSEKEYEEKISSLRIELEDKLAEIDMLRNKLL 404
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 29.9 bits (64), Expect = 0.42
Identities = 26/137 (18%), Positives = 60/137 (43%)
Frame = -2
Query: 560 DEKQMALLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLGGE 381
DEK+ + + +L +NN L++E+ + A+ +++ L + L+ K + ++ E
Sbjct: 425 DEKEEISASSALEKLIKNNSCLEAELPSMYAAFDQSQSRLLKKYEELETKEKKALEMHYE 484
Query: 380 LDRTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRAQVSTAEKEREELKNRLHW 201
R + A+ +A + T +K L+ + + + + K LK L
Sbjct: 485 KARATQKYFAAM-KARDILMTEKKTLKLAENKEHDYIGKLQEREHALTKYESSLKAELE- 542
Query: 200 QMKRLTENFEQAQLRIL 150
K++ E + + + +L
Sbjct: 543 VYKQIKEIYGKHSVEVL 559
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 29.9 bits (64), Expect = 0.42
Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 13/169 (7%)
Frame = -2
Query: 584 EKPPERGGDEKQM-ALLNQRISQLAENNISLKSEIERLKASVIRTEE--SAL-ANEKRLQ 417
++ PE EK++ A NQ+ L +LKS E L + EE SA+ E+R +
Sbjct: 247 DESPEESEPEKELKATFNQQNQDLYNQTEALKSTNEELINQIKSAEELDSAIQVLEERYR 306
Query: 416 EKMHECAQLGGELD------RTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRA 255
+ + + +R + LQ E+ E+ + L+ L+ Q+
Sbjct: 307 TMQRDEVKFQSAMSGMKSKMESRTNLMKQLQVNIEEKESQLQLLKEKRDSLKYQVENQDI 366
Query: 254 QVSTAEK---EREELKNRLHWQMKRLTENFEQAQLRILGLQTQVQSLRR 117
+S EK ERE+L L+ +++E ++ L +Q + SL +
Sbjct: 367 SISEFEKMVSEREQLDRNLNMIGSKISELRKEVFDTDLLIQASIDSLEK 415
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 28.7 bits (61), Expect = 0.96
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Frame = -2
Query: 557 EKQMALLNQRISQL---AENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLG 387
E Q+ L + QL A+N K+E E+L V EE N+K L+E
Sbjct: 54 ESQLEELEEETKQLRLKADNEDIQKTEAEQLSRKVELLEEELETNDKLLRETT------- 106
Query: 386 GELDRTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRAQVSTAEKEREEL 219
E R D + +R + E R ++ + E+ + +A++ + E+L
Sbjct: 107 -EKMRQTDVKAEHFERRVQSLERERDDMEQKLEEMTDKYTKVKAELDEVHQALEDL 161
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 28.7 bits (61), Expect = 0.96
Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Frame = -2
Query: 572 ERGGDEKQMALLNQRISQLAENNISLKSEIERLKA---SVIRTEESALANEKRLQEKMHE 402
E+ ++ LL ++I + + + + E+ L++ SV+ TE+ E+R+ E E
Sbjct: 742 EQAKFKRDEQLLVEKIEGIKKRILLKRREVNSLESQELSVLDTEKIQTL-ERRISETEKE 800
Query: 401 CAQLGGELDRTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRAQVSTA--EKER 228
G+L ++E R E +R + E +R L++ + ++S EK
Sbjct: 801 LESYAGQLQDAKNEEHRIRDNQRPVIEEIRIYREKIQTETQR-LSSLQTELSRLRDEKRN 859
Query: 227 EELKNRLHWQ 198
E+ H Q
Sbjct: 860 SEVDIERHRQ 869
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 231 TGRAEKPIALANEASDGELRAGPAPDPRSADAGAVP 124
T + + P+A N AS G L P P + G+VP
Sbjct: 627 TAKGKNPLAAENHASGGRLPKVPIPPLSNMRRGSVP 662
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.9 bits (59), Expect = 1.7
Identities = 21/87 (24%), Positives = 44/87 (50%)
Frame = -2
Query: 527 ISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLGGELDRTRDEASRA 348
I +L + LKSE+E +K+ E N+ ++++ + +L RT+ E +
Sbjct: 1333 IEELNQEIGHLKSELETVKSKSEDLENERAQNQSKIEQLELKNTKLAAAW-RTKYE--QV 1389
Query: 347 LQRAHEQTETVRKCLQTTVAELERQLA 267
+ ++ E+ +R+ L +ELE ++A
Sbjct: 1390 VNKSLEKHNQIRQQLSQKTSELEAKVA 1416
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 27.9 bits (59), Expect = 1.7
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -1
Query: 363 RGLAGAAESPRANGNCAEVPPNHGSRAGTTAGGLQGTS-QHRREGTGRAEKP 211
R LA A + RAN + P R G +AGG+ S ++ R G R P
Sbjct: 858 RKLAEKAAARRANIGASSPSPGAWRRGGASAGGVSRDSPRYSRGGYSRGSVP 909
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 27.5 bits (58), Expect = 2.2
Identities = 27/128 (21%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Frame = -2
Query: 536 NQRI-SQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQLGGELDRTRDE 360
NQ + Q+ N L+ E+L + +E L +E+ + + E A+ +D R+E
Sbjct: 315 NQELCDQIEINKKKLEFRKEQLLKQLSNAQEK-LEHEQHSRNQKLEAAKQ--RMDNIREE 371
Query: 359 ASRALQRAH---EQTETVRKCLQTTVAELERQLAASRAQVSTAEKEREELKNRLHWQMKR 189
Q + ++TE ++ T ++ +Q+S+ E E+LK+ + +
Sbjct: 372 YKVITQERNKKIQETEKKNAMIEMTEQKIAGMREELESQISSITMEFEKLKSHVELYIAE 431
Query: 188 LTENFEQA 165
L N +
Sbjct: 432 LLRNLRSS 439
Score = 27.1 bits (57), Expect = 2.9
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = -2
Query: 497 LKSEIERLKASVIRTEESALANEKRLQEKMHE---CAQLGGELDRTRDEASRALQRAHEQ 327
L S+ +L++ I +++ NE+ Q + + C+Q+ E DR R EAS R H
Sbjct: 163 LLSQDRKLESEAI-IKQNEERNEEMFQSLIEDKRLCSQVRTEYDRIRMEASELKIRYH-- 219
Query: 326 TETVRKCLQTTVAELER 276
V + +T+ E+E+
Sbjct: 220 --NVDSLMASTLEEIEK 234
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 27.5 bits (58), Expect = 2.2
Identities = 42/215 (19%), Positives = 93/215 (43%), Gaps = 8/215 (3%)
Frame = -2
Query: 725 LKAXQMRLKDAQQA-QAIAEHNAEQ--LARELNCAREKVHVLLHNSLKPPEKP--PERGG 561
++ +M + QQA +AI AEQ +A+E A+++ + L E+ RG
Sbjct: 369 MERQRMAAQQHQQALEAIQMAQAEQQRIAQE-QLAQQQFQMQTQGQLAELEQQLLATRGQ 427
Query: 560 DEKQMALLNQRISQLAENNISLKSEIERLKASVIRTEE--SALANEKRLQEKMHEC-AQL 390
E+ LLNQ +++ L L+ + + ++ +L N+ + +E A+L
Sbjct: 428 LEQSNVLLNQYDARVRTLENELSQAGVNLQEQIHQNDDLIESLKNQILTWKNKYEALAKL 487
Query: 389 GGELDRTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRAQVSTAEKEREELKNR 210
+L + + ++ + + ++ + ++ER++ +++ ER+ ++
Sbjct: 488 YTQLRQEHLDLLSKYKQIQLKASSAQEAIDKK-EKMEREMKNKNLELADMILERDRARHE 546
Query: 209 LHWQMKRLTENFEQAQLRILGLQTQVQSLRRTASS 105
L + + E + + LQ + SL R SS
Sbjct: 547 LETMHRSQRDKQESTERELRLLQEKAASLERNKSS 581
>SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 633 AVELPSELLCVVLSDGLRLLSVLQPH 710
A E P++ L +++ DGLR +LQPH
Sbjct: 38 AGEAPAKRLFLIVGDGLRPDKLLQPH 63
>SPCC553.09c |spb70|pol12|DNA polymerase alpha
B-subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 309 LPHSFRLLVGSLQRPRGLVPGAVQLSPKLGTFVHLLLKPL 428
LP R V +++ L PG LGTF L + PL
Sbjct: 509 LPSDLRYFVKNVENVVSLNPGKATKGINLGTFAKLTIAPL 548
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 27.1 bits (57), Expect = 2.9
Identities = 10/42 (23%), Positives = 24/42 (57%)
Frame = -2
Query: 764 QEKLQELAPIPDLLKAXQMRLKDAQQAQAIAEHNAEQLAREL 639
Q + + + IP+++ +LKD ++++A+ E E++ L
Sbjct: 485 QISVDDTSNIPEIIARLSEKLKDREESEAVTEDLIEEVVNRL 526
>SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 596
Score = 27.1 bits (57), Expect = 2.9
Identities = 27/96 (28%), Positives = 41/96 (42%)
Frame = -2
Query: 569 RGGDEKQMALLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHECAQL 390
+G DE + AL+NQ S A +IS L AS +RT S + K+ + L
Sbjct: 348 KGWDENRSALVNQLYSPNATFSIS-------LNASNVRTNFSQKTDTKKWGAYKMKSRNL 400
Query: 389 GGELDRTRDEASRALQRAHEQTETVRKCLQTTVAEL 282
+++ E+ L HE+ K L T +L
Sbjct: 401 --LYSQSQKESKSRLFNGHEEISNAVKSLPATAHDL 434
>SPAC664.03 |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 5.1
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -2
Query: 620 VHVLLHNSLKPPEKPPER---GGDEKQMALLNQRISQLAENNISLKSEIE 480
+ V HN L PP PP+ KQ AL N + + E I ++++IE
Sbjct: 11 LRVRYHNPLPPPPFPPKLINIPNPVKQYALPNFVSTLVQEKKIPIENDIE 60
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = -2
Query: 479 RLKASVIRTEESALANEKRLQEKMHECAQLGGELDRTRDEASRALQRAHEQTETVRKCL 303
R+ + + +A A ++ L + C +L + + S L H Q TV++CL
Sbjct: 315 RIDGQFLDEQGNAPAGQRILLYLLRRCYAYIYQLLSSSEPVSEELMAVHNQLRTVKRCL 373
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 26.2 bits (55), Expect = 5.1
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -2
Query: 374 RTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRAQVSTAEKEREEL-KNRLHWQ 198
R D A + A R+ + LER+L R ++ E+E++E K RL
Sbjct: 389 RLPDSAIDLVDEAAAAVRVTRESQPEVLDNLERKLRQLRVEIRALEREKDEASKERLKAA 448
Query: 197 MKRLTENFEQAQ 162
K + E+ +
Sbjct: 449 RKEAEQVEEETR 460
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 266 PPAVVPALLPWFGGTSAQFPFARGLSAAPARPRPWCGPTLPQA 394
PP +P + P +SA A+ P+ P+P P +P+A
Sbjct: 484 PPPAMPKVFPERDISSASQKAAQPSVITPSVPQPPAAPVVPEA 526
>SPCC1620.10 |cwf26||complexed with Cdc5 protein Cwf26
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 26.2 bits (55), Expect = 5.1
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = -2
Query: 383 ELDRTRDEASRALQRAHEQTETVRKCLQTT--VAELERQLAASRAQVSTAEKEREELKNR 210
E R E +R EQ + V + Q + ELERQ A+ + +ELK R
Sbjct: 173 EAKRKLKEKEEEARRQKEQQQGVVQVRQQKEYLKELERQKTVPLARYEDDPEYNKELKER 232
Query: 209 LHW 201
W
Sbjct: 233 SRW 235
>SPAC1071.02 |||TFIIH regulator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1018
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -2
Query: 560 DEKQMALLNQRISQLAENNISLKSEIERLKASVIRTEESAL 438
D+ ++AL ++ A + + L + ERLKAS +R + AL
Sbjct: 232 DDLKIALRETLVANDAFSKLLLPALFERLKASTVRIKIDAL 272
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 6.8
Identities = 34/184 (18%), Positives = 77/184 (41%), Gaps = 13/184 (7%)
Frame = -2
Query: 590 PPEKPPERGGDEKQMALLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKR--LQ 417
PP PP + L ++ + + + L +R+K ++ +E A +KR L+
Sbjct: 14 PPTSPPNTTSSDDFAVLKEPKVEAILNSELGLAILNDRIKDYLLTCKELAGFFKKRSILE 73
Query: 416 EK----MHECAQLGGELDRTRDEASRALQRAHEQTETVRKCLQTTVAELERQLAASRAQV 249
E+ + + A+ E +++ + ++ + + + + L L++ L+A QV
Sbjct: 74 EESGKNLQKLAKSYLETFQSKHHSPQSFSASVITSMEIHEQLANHSLTLQKTLSAFSDQV 133
Query: 248 ----STAEKEREELKNRLHWQMKRLTE---NFEQAQLRILGLQTQVQSLRRTASSTGDGD 90
AE++R+ +K Q E ++++ R G +T+ R + GD
Sbjct: 134 IEFHKNAERKRKSIKEYAKKQENAYLEAVMQMDKSKSRFKGAETE---YNRALDNKNTGD 190
Query: 89 GENQ 78
+ +
Sbjct: 191 SQKK 194
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -2
Query: 572 ERGGDEKQMALLNQRISQLAENNISLKSEIERLKASVIRTEESALANEKRLQEKMHE 402
E GD+ A Q + E +L+ + + +I EESA +E+ L+E+ E
Sbjct: 32 EELGDDALAAEEGQSVLDEQEIEEALEEDDTNYEEDIIDDEESAQVDEEELEEEEEE 88
>SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 730
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -2
Query: 317 VRKCLQTTVAELERQLAASRAQVSTAEKEREELKNR 210
+R CL+ + + RQ A++ V E +EE++N+
Sbjct: 187 MRACLREPLNRIARQQEAAQKLVEALEGAQEEIENK 222
>SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 351
Score = 25.4 bits (53), Expect = 9.0
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 473 KASVIRTEESALANEKRLQEKMHECAQLGGELDRTRDE 360
K IR+E L + + E+ E QLG LDR D+
Sbjct: 61 KLMKIRSELEELWEQSMMYEEQKELTQLGEMLDRLWDK 98
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 25.4 bits (53), Expect = 9.0
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = -2
Query: 239 EKEREELKNRLHWQMKRLTENFEQAQLRILG----LQTQVQSLR 120
+K+R+E +NR Q ++ + +A L+I +TQVQS R
Sbjct: 298 DKQRKEFENRQRLQKEKEFQKSREAALKIHASRNTTETQVQSAR 341
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 25.4 bits (53), Expect = 9.0
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = -2
Query: 758 KLQELAPIPDLLKAXQMRLKDAQQAQAIAEHNAEQLARELNCAREKVHVLLHNSLKPPEK 579
K+Q+ A + DL K Q + +DA+Q + I E+ + RE + + + P ++
Sbjct: 91 KMQDQARLRDLQKIRQQKAEDAEQRKKILA-EIERDKKRRAAERENKNSSVKETAAPIKQ 149
Query: 578 P 576
P
Sbjct: 150 P 150
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,863,918
Number of Sequences: 5004
Number of extensions: 55542
Number of successful extensions: 294
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 290
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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