Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11m13
(765 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 26 0.33
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 25 0.58
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 3.1
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 23 4.1
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 5.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 9.5
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 9.5
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 9.5
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 9.5
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 9.5
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 9.5
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 9.5
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 9.5
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 26.2 bits (55), Expect = 0.33
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -3
Query: 592 SPRKNLRNAVGTRNKWHFLTREYHNSRRITSA 497
S KNL N + +KW +L ++ N R +A
Sbjct: 27 SSGKNLTNTLNVIHKWKYLDYDFDNDERRQAA 58
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 25.4 bits (53), Expect = 0.58
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 233 EREELKNRLHWQMKRLTENFEQAQLRILG 147
E ++ N L + +L+E FEQ +++ILG
Sbjct: 293 ELVKILNELFARFDQLSERFEQLRIKILG 321
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.0 bits (47), Expect = 3.1
Identities = 16/56 (28%), Positives = 21/56 (37%)
Frame = +2
Query: 251 LVPWRPPAVVPALLPWFGGTSAQFPFARGLSAAPARPRPWCGPTLPQAGHIRASSL 418
LV W+ PA F PF P +P PW AG++ S+L
Sbjct: 201 LVGWKDKRSHPAYNMTFAQNG---PFNTTTIFVPVKPCPWICELTNDAGYVVYSAL 253
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 22.6 bits (46), Expect = 4.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 431 EKRLQEKMHECAQLGGELDRTRDEASRALQRAH 333
EK EK+ LG ++ RT EAS AH
Sbjct: 130 EKMSDEKISTLYALGAKIIRTPTEASWHSPEAH 162
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 5.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -2
Query: 626 EKVHVLLHNSLKPPEKPP 573
+K HVL HN L P P
Sbjct: 642 DKEHVLAHNDLMSPLDEP 659
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 488 EIERLKASVIRTEESALANEKRLQEK 411
E ERLK +I E A EK+L ++
Sbjct: 51 EHERLKKKMILEYELRRAREKKLSKR 76
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 488 EIERLKASVIRTEESALANEKRLQEK 411
E ERLK +I E A EK+L ++
Sbjct: 51 EHERLKKKMILEYELRRAREKKLSKR 76
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 488 EIERLKASVIRTEESALANEKRLQEK 411
E ERLK +I E A EK+L ++
Sbjct: 51 EHERLKKKMILEYELRRAREKKLSKR 76
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 488 EIERLKASVIRTEESALANEKRLQEK 411
E ERLK +I E A EK+L ++
Sbjct: 51 EHERLKKKMILEYELRRAREKKLSKR 76
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 488 EIERLKASVIRTEESALANEKRLQEK 411
E ERLK +I E A EK+L ++
Sbjct: 51 EHERLKKKMILEYELRRAREKKLSKR 76
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 488 EIERLKASVIRTEESALANEKRLQEK 411
E ERLK +I E A EK+L ++
Sbjct: 51 EHERLKKKMILEYELRRAREKKLSKR 76
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 488 EIERLKASVIRTEESALANEKRLQEK 411
E ERLK +I E A EK+L ++
Sbjct: 51 EHERLKKKMILEYELRRAREKKLSKR 76
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 488 EIERLKASVIRTEESALANEKRLQEK 411
E ERLK +I E A EK+L ++
Sbjct: 51 EHERLKKKMILEYELRRAREKKLSKR 76
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,998
Number of Sequences: 438
Number of extensions: 4108
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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