Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11l12
(446 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011765-1|AAH11765.1| 449|Homo sapiens chromosome 11 open read... 34 0.25
AY358754-1|AAQ89114.1| 449|Homo sapiens C11orf24 protein. 34 0.25
AF264781-1|AAG36936.1| 449|Homo sapiens DM4E3 protein. 34 0.25
AK127255-1|BAC86902.1| 1007|Homo sapiens protein ( Homo sapiens ... 33 0.44
AC002398-4|AAB81198.1| 903|Homo sapiens F25965_3 protein. 33 0.44
BC064401-1|AAH64401.1| 547|Homo sapiens TJAP1 protein protein. 32 1.0
BC046239-1|AAH46239.1| 557|Homo sapiens TJAP1 protein protein. 32 1.0
AL355802-3|CAI42618.1| 557|Homo sapiens RP3-337H4.1 protein. 32 1.0
AL355802-2|CAI42619.1| 547|Homo sapiens RP3-337H4.1 protein. 32 1.0
AK024269-1|BAB14867.1| 547|Homo sapiens protein ( Homo sapiens ... 32 1.0
AB002350-1|BAA20809.2| 721|Homo sapiens KIAA0352 protein. 31 1.4
BC028309-1|AAH28309.1| 453|Homo sapiens MLXIP protein protein. 31 1.8
AF312918-1|AAG34121.1| 919|Homo sapiens MondoA protein. 31 1.8
AF245481-1|AAL55690.1| 379|Homo sapiens Mlx interactor beta pro... 31 1.8
AF245480-1|AAL55689.1| 526|Homo sapiens Mlx interactor alpha pr... 31 1.8
AB020674-1|BAA74890.2| 568|Homo sapiens KIAA0867 protein protein. 31 1.8
U33819-1|AAB04121.1| 537|Homo sapiens MAZ protein. 31 2.4
D85131-1|BAA12728.1| 497|Homo sapiens Myc-associated zinc-finge... 31 2.4
D21090-1|BAA04652.1| 409|Homo sapiens XP-C repair complementing... 31 2.4
BC040485-1|AAH40485.1| 435|Homo sapiens GRSF1 protein protein. 31 2.4
BC020973-1|AAH20973.1| 409|Homo sapiens RAD23B protein protein. 31 2.4
AY313777-1|AAP81008.1| 337|Homo sapiens RAD23-like protein B pr... 31 2.4
AY165178-1|AAN47194.1| 409|Homo sapiens RAD23 homolog B (S. cer... 31 2.4
AL137852-2|CAD13275.1| 409|Homo sapiens RAD23 homolog B (S. cer... 31 2.4
AL137852-1|CAH70394.1| 146|Homo sapiens RAD23 homolog B (S. cer... 31 2.4
AK223479-1|BAD97199.1| 409|Homo sapiens UV excision repair prot... 31 2.4
AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens ... 31 2.4
AF489858-1|AAN03800.1| 493|Homo sapiens serum amyloid A activat... 31 2.4
AB018297-1|BAA34474.2| 1174|Homo sapiens KIAA0754 protein protein. 31 2.4
AB017335-2|BAA33064.1| 477|Homo sapiens Myc-associated zinc fin... 31 2.4
BC041792-1|AAH41792.1| 562|Homo sapiens AT rich interactive dom... 30 3.1
AK127581-1|BAC87042.1| 980|Homo sapiens protein ( Homo sapiens ... 30 3.1
AF116846-1|AAD09133.1| 560|Homo sapiens bright and dead ringer ... 30 3.1
AB208830-1|BAD92067.1| 476|Homo sapiens AT rich interactive dom... 30 3.1
AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein pr... 30 4.1
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 30 4.1
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot... 30 4.1
AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein. 30 4.1
AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein. 30 4.1
AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein. 30 4.1
Y09788-1|CAA70926.1| 845|Homo sapiens mucin protein. 29 5.5
U95031-1|AAB65151.1| 879|Homo sapiens sublingual gland mucin pr... 29 5.5
U78551-1|AAC51343.1| 390|Homo sapiens mucin MUC5B protein. 29 5.5
BC013354-1|AAH13354.1| 621|Homo sapiens acyl-Coenzyme A dehydro... 29 5.5
BC007970-1|AAH07970.1| 621|Homo sapiens acyl-Coenzyme A dehydro... 29 5.5
BC001817-1|AAH01817.2| 343|Homo sapiens ACAD9 protein protein. 29 5.5
AK024012-1|BAB14775.1| 621|Homo sapiens protein ( Homo sapiens ... 29 5.5
AK022568-1|BAB14104.1| 498|Homo sapiens protein ( Homo sapiens ... 29 5.5
AJ011021-1|CAB56834.1| 466|Homo sapiens cardiac potassium chann... 29 5.5
AF327351-1|AAL56011.1| 621|Homo sapiens very-long-chain acyl-Co... 29 5.5
M61951-1|AAA59486.1| 1786|Homo sapiens laminin B1 protein. 29 9.5
M61916-1|AAA59482.1| 1786|Homo sapiens laminin B1 protein. 29 9.5
M55370-1|AAA59485.1| 1786|Homo sapiens laminin B1 protein. 29 9.5
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 29 9.5
BC113455-1|AAI13456.1| 1786|Homo sapiens laminin, beta 1 protein. 29 9.5
BC091514-1|AAH91514.1| 671|Homo sapiens sorbin and SH3 domain c... 29 9.5
BC067260-1|AAH67260.2| 671|Homo sapiens sorbin and SH3 domain c... 29 9.5
BC066647-1|AAH66647.1| 1457|Homo sapiens KIAA0586 protein protein. 29 9.5
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 29 9.5
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 29 9.5
AF451977-1|AAL49758.1| 1431|Homo sapiens cask-interacting protei... 29 9.5
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 29 9.5
AF037261-1|AAC09244.1| 671|Homo sapiens SH3-containing adaptor ... 29 9.5
AB037727-1|BAA92544.1| 1154|Homo sapiens KIAA1306 protein protein. 29 9.5
AB011158-1|BAA25512.2| 1576|Homo sapiens KIAA0586 protein protein. 29 9.5
>BC011765-1|AAH11765.1| 449|Homo sapiens chromosome 11 open reading
frame 24 protein.
Length = 449
Score = 33.9 bits (74), Expect = 0.25
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 70 ARATPETVLAVAVSTPLERARPRPTPPLVSWSATPA-SATNTPSLAT--ARLPHSIATVA 240
A T + + A STP+ A P PT S TP+ +AT PSL+T A++P S A +
Sbjct: 146 APTTAASSMTAASSTPMTLALPAPTS--TSTGRTPSTTATGHPSLSTALAQVPKSSA-LP 202
Query: 241 RTASL 255
RTA+L
Sbjct: 203 RTATL 207
>AY358754-1|AAQ89114.1| 449|Homo sapiens C11orf24 protein.
Length = 449
Score = 33.9 bits (74), Expect = 0.25
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 70 ARATPETVLAVAVSTPLERARPRPTPPLVSWSATPA-SATNTPSLAT--ARLPHSIATVA 240
A T + + A STP+ A P PT S TP+ +AT PSL+T A++P S A +
Sbjct: 146 APTTAASSMTAASSTPMTLALPAPTS--TSTGRTPSTTATGHPSLSTALAQVPKSSA-LP 202
Query: 241 RTASL 255
RTA+L
Sbjct: 203 RTATL 207
>AF264781-1|AAG36936.1| 449|Homo sapiens DM4E3 protein.
Length = 449
Score = 33.9 bits (74), Expect = 0.25
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 70 ARATPETVLAVAVSTPLERARPRPTPPLVSWSATPA-SATNTPSLAT--ARLPHSIATVA 240
A T + + A STP+ A P PT S TP+ +AT PSL+T A++P S A +
Sbjct: 146 APTTAASSMTAASSTPMTLALPAPTS--TSTGRTPSTTATGHPSLSTALAQVPKSSA-LP 202
Query: 241 RTASL 255
RTA+L
Sbjct: 203 RTATL 207
>AK127255-1|BAC86902.1| 1007|Homo sapiens protein ( Homo sapiens
cDNA FLJ45322 fis, clone BRHIP3006294, moderately
similar to Mus musculus Cdc42 GTPase-activating protein
(Cdgap). ).
Length = 1007
Score = 33.1 bits (72), Expect = 0.44
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 79 TPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATAR--LPHSIATVARTA 249
+P + A+ +S PL + P L+ PASAT TP+L+ R PH I + R A
Sbjct: 650 SPASPAALDISEPLAVSVPPAVLELLGAGGAPASATPTPALSPGRSLRPHLIPLLLRGA 708
>AC002398-4|AAB81198.1| 903|Homo sapiens F25965_3 protein.
Length = 903
Score = 33.1 bits (72), Expect = 0.44
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 79 TPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATAR--LPHSIATVARTA 249
+P + A+ +S PL + P L+ PASAT TP+L+ R PH I + R A
Sbjct: 431 SPASPAALDISEPLAVSVPPAVLELLGAGGAPASATPTPALSPGRSLRPHLIPLLLRGA 489
>BC064401-1|AAH64401.1| 547|Homo sapiens TJAP1 protein protein.
Length = 547
Score = 31.9 bits (69), Expect = 1.0
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +1
Query: 46 RNFDCKRSARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHS 225
RN AT + + V ERARP P P +TPASA +P + P +
Sbjct: 333 RNSPLPNCTYATRQAISLSLVEEGSERARPSPVP------STPASAQASPHHQPSPAPLT 386
Query: 226 IATVARTASLE 258
++ A +AS E
Sbjct: 387 LSAPASSASSE 397
>BC046239-1|AAH46239.1| 557|Homo sapiens TJAP1 protein protein.
Length = 557
Score = 31.9 bits (69), Expect = 1.0
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +1
Query: 46 RNFDCKRSARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHS 225
RN AT + + V ERARP P P +TPASA +P + P +
Sbjct: 343 RNSPLPNCTYATRQAISLSLVEEGSERARPSPVP------STPASAQASPHHQPSPAPLT 396
Query: 226 IATVARTASLE 258
++ A +AS E
Sbjct: 397 LSAPASSASSE 407
>AL355802-3|CAI42618.1| 557|Homo sapiens RP3-337H4.1 protein.
Length = 557
Score = 31.9 bits (69), Expect = 1.0
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +1
Query: 46 RNFDCKRSARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHS 225
RN AT + + V ERARP P P +TPASA +P + P +
Sbjct: 343 RNSPLPNCTYATRQAISLSLVEEGSERARPSPVP------STPASAQASPHHQPSPAPLT 396
Query: 226 IATVARTASLE 258
++ A +AS E
Sbjct: 397 LSAPASSASSE 407
>AL355802-2|CAI42619.1| 547|Homo sapiens RP3-337H4.1 protein.
Length = 547
Score = 31.9 bits (69), Expect = 1.0
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +1
Query: 46 RNFDCKRSARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHS 225
RN AT + + V ERARP P P +TPASA +P + P +
Sbjct: 333 RNSPLPNCTYATRQAISLSLVEEGSERARPSPVP------STPASAQASPHHQPSPAPLT 386
Query: 226 IATVARTASLE 258
++ A +AS E
Sbjct: 387 LSAPASSASSE 397
>AK024269-1|BAB14867.1| 547|Homo sapiens protein ( Homo sapiens
cDNA FLJ14207 fis, clone NT2RP3003185, weakly similar to
TROPOMYOSIN 1, FUSION PROTEIN 33. ).
Length = 547
Score = 31.9 bits (69), Expect = 1.0
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +1
Query: 46 RNFDCKRSARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHS 225
RN AT + + V ERARP P P +TPASA +P + P +
Sbjct: 333 RNSPLPNCTYATRQAISLSLVEEGSERARPSPVP------STPASAQASPHHQPSPAPLT 386
Query: 226 IATVARTASLE 258
++ A +AS E
Sbjct: 387 LSAPASSASSE 397
>AB002350-1|BAA20809.2| 721|Homo sapiens KIAA0352 protein.
Length = 721
Score = 31.5 bits (68), Expect = 1.4
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +1
Query: 31 YTGQHRNFDCKRSARAT---PETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSL 201
Y G RN+ A + E +A + L +P P PP TPA T+ PS+
Sbjct: 174 YLGADRNYVLPSDAGGSYKEEEKNVASDANHSLHLPQPPPPPPKTEDHDTPAPFTSIPSM 233
Query: 202 ATARLPHSIATVARTAS 252
T L +++T +T++
Sbjct: 234 MTQPLLGTVSTGIQTST 250
>BC028309-1|AAH28309.1| 453|Homo sapiens MLXIP protein protein.
Length = 453
Score = 31.1 bits (67), Expect = 1.8
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 CQHFSSRTKYTGQHRNFDCKRSARATPETVLAVAVSTPLERARPRPTP--PLVSWSATPA 177
C+H S Q +F + P+ L V + PL P P P P++ PA
Sbjct: 224 CEHTSRTEDPFIQPTDFGPSEPPLSVPQPFLPV-FTMPLLSPSPAPPPISPVLPLVPPPA 282
Query: 178 SATNTPSLATARLPHSIATVARTASL 255
+A N P+ T P A V + S+
Sbjct: 283 TALNPPAPPTFHQPQKFAGVNKAPSV 308
>AF312918-1|AAG34121.1| 919|Homo sapiens MondoA protein.
Length = 919
Score = 31.1 bits (67), Expect = 1.8
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 CQHFSSRTKYTGQHRNFDCKRSARATPETVLAVAVSTPLERARPRPTP--PLVSWSATPA 177
C+H S Q +F + P+ L V + PL P P P P++ PA
Sbjct: 399 CEHTSRTEDPFIQPTDFGPSEPPLSVPQPFLPV-FTMPLLSPSPAPPPISPVLPLVPPPA 457
Query: 178 SATNTPSLATARLPHSIATVARTASL 255
+A N P+ T P A V + S+
Sbjct: 458 TALNPPAPPTFHQPQKFAGVNKAPSV 483
>AF245481-1|AAL55690.1| 379|Homo sapiens Mlx interactor beta
protein.
Length = 379
Score = 31.1 bits (67), Expect = 1.8
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 CQHFSSRTKYTGQHRNFDCKRSARATPETVLAVAVSTPLERARPRPTP--PLVSWSATPA 177
C+H S Q +F + P+ L V + PL P P P P++ PA
Sbjct: 6 CEHTSRTEDPFIQPTDFGPSEPPLSVPQPFLPV-FTMPLLSPSPAPPPISPVLPLVPPPA 64
Query: 178 SATNTPSLATARLPHSIATVARTASL 255
+A N P+ T P A V + S+
Sbjct: 65 TALNPPAPPTFHQPQKFAGVNKAPSV 90
>AF245480-1|AAL55689.1| 526|Homo sapiens Mlx interactor alpha
protein.
Length = 526
Score = 31.1 bits (67), Expect = 1.8
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 CQHFSSRTKYTGQHRNFDCKRSARATPETVLAVAVSTPLERARPRPTP--PLVSWSATPA 177
C+H S Q +F + P+ L V + PL P P P P++ PA
Sbjct: 6 CEHTSRTEDPFIQPTDFGPSEPPLSVPQPFLPV-FTMPLLSPSPAPPPISPVLPLVPPPA 64
Query: 178 SATNTPSLATARLPHSIATVARTASL 255
+A N P+ T P A V + S+
Sbjct: 65 TALNPPAPPTFHQPQKFAGVNKAPSV 90
>AB020674-1|BAA74890.2| 568|Homo sapiens KIAA0867 protein protein.
Length = 568
Score = 31.1 bits (67), Expect = 1.8
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 CQHFSSRTKYTGQHRNFDCKRSARATPETVLAVAVSTPLERARPRPTP--PLVSWSATPA 177
C+H S Q +F + P+ L V + PL P P P P++ PA
Sbjct: 48 CEHTSRTEDPFIQPTDFGPSEPPLSVPQPFLPV-FTMPLLSPSPAPPPISPVLPLVPPPA 106
Query: 178 SATNTPSLATARLPHSIATVARTASL 255
+A N P+ T P A V + S+
Sbjct: 107 TALNPPAPPTFHQPQKFAGVNKAPSV 132
>U33819-1|AAB04121.1| 537|Homo sapiens MAZ protein.
Length = 537
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/62 (33%), Positives = 26/62 (41%)
Frame = +1
Query: 70 ARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVARTA 249
A A P A V T + P P PP SA A A S AT + A VA T+
Sbjct: 170 AAAPPAPAAASTVDTAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTS 229
Query: 250 SL 255
++
Sbjct: 230 TV 231
>D85131-1|BAA12728.1| 497|Homo sapiens Myc-associated zinc-finger
protein of human islet protein.
Length = 497
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/62 (33%), Positives = 26/62 (41%)
Frame = +1
Query: 70 ARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVARTA 249
A A P A V T + P P PP SA A A S AT + A VA T+
Sbjct: 136 AAAPPAPAAASTVDTAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTS 195
Query: 250 SL 255
++
Sbjct: 196 TV 197
>D21090-1|BAA04652.1| 409|Homo sapiens XP-C repair complementing
protein (p58/HHR23B) protein.
Length = 409
Score = 30.7 bits (66), Expect = 2.4
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 82 PETVLAVAVSTPLERARPRPTPPLVSWSATPASA-TNTPSLATARLPHSIATVARTASLE 258
P+ V A +T + A T S + T A A T P+LA P SI + TAS E
Sbjct: 77 PKAVSTPAPATTQQSAPASTTAVTSSTTTTVAQAPTPVPALAPTSTPASITPASATASSE 136
Query: 259 P 261
P
Sbjct: 137 P 137
>BC040485-1|AAH40485.1| 435|Homo sapiens GRSF1 protein protein.
Length = 435
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 145 PPLVSWSATPASATNTPSLATARLPHSIATVA 240
PP V+ SA A+A + P+L + LP S+A A
Sbjct: 79 PPAVATSAAAAAAASYPALRASLLPQSLAAAA 110
>BC020973-1|AAH20973.1| 409|Homo sapiens RAD23B protein protein.
Length = 409
Score = 30.7 bits (66), Expect = 2.4
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 82 PETVLAVAVSTPLERARPRPTPPLVSWSATPASA-TNTPSLATARLPHSIATVARTASLE 258
P+ V A +T + A T S + T A A T P+LA P SI + TAS E
Sbjct: 77 PKAVSTPAPATTQQSAPASTTAVTSSTTTTVAQAPTPVPALAPTSTPASITPASATASSE 136
Query: 259 P 261
P
Sbjct: 137 P 137
>AY313777-1|AAP81008.1| 337|Homo sapiens RAD23-like protein B
protein.
Length = 337
Score = 30.7 bits (66), Expect = 2.4
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 82 PETVLAVAVSTPLERARPRPTPPLVSWSATPASA-TNTPSLATARLPHSIATVARTASLE 258
P+ V A +T + A T S + T A A T P+LA P SI + TAS E
Sbjct: 5 PKAVSTPAPATTQQSAPASTTAVTSSTTTTVAQAPTPVPALAPTSTPASITPASATASSE 64
Query: 259 P 261
P
Sbjct: 65 P 65
>AY165178-1|AAN47194.1| 409|Homo sapiens RAD23 homolog B (S.
cerevisiae) protein.
Length = 409
Score = 30.7 bits (66), Expect = 2.4
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 82 PETVLAVAVSTPLERARPRPTPPLVSWSATPASA-TNTPSLATARLPHSIATVARTASLE 258
P+ V A +T + A T S + T A A T P+LA P SI + TAS E
Sbjct: 77 PKAVSTPAPATTQQSAPASTTAVTSSTTTTVAQAPTPVPALAPTSTPASITPASATASSE 136
Query: 259 P 261
P
Sbjct: 137 P 137
>AL137852-2|CAD13275.1| 409|Homo sapiens RAD23 homolog B (S.
cerevisiae) protein.
Length = 409
Score = 30.7 bits (66), Expect = 2.4
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 82 PETVLAVAVSTPLERARPRPTPPLVSWSATPASA-TNTPSLATARLPHSIATVARTASLE 258
P+ V A +T + A T S + T A A T P+LA P SI + TAS E
Sbjct: 77 PKAVSTPAPATTQQSAPASTTAVTSSTTTTVAQAPTPVPALAPTSTPASITPASATASSE 136
Query: 259 P 261
P
Sbjct: 137 P 137
>AL137852-1|CAH70394.1| 146|Homo sapiens RAD23 homolog B (S.
cerevisiae) protein.
Length = 146
Score = 30.7 bits (66), Expect = 2.4
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 82 PETVLAVAVSTPLERARPRPTPPLVSWSATPASA-TNTPSLATARLPHSIATVARTASLE 258
P+ V A +T + A T S + T A A T P+LA P SI + TAS E
Sbjct: 77 PKAVSTPAPATTQQSAPASTTAVTSSTTTTVAQAPTPVPALAPTSTPASITPASATASSE 136
Query: 259 P 261
P
Sbjct: 137 P 137
>AK223479-1|BAD97199.1| 409|Homo sapiens UV excision repair protein
RAD23 homolog B variant protein.
Length = 409
Score = 30.7 bits (66), Expect = 2.4
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 82 PETVLAVAVSTPLERARPRPTPPLVSWSATPASA-TNTPSLATARLPHSIATVARTASLE 258
P+ V A +T + A T S + T A A T P+LA P SI + TAS E
Sbjct: 77 PKAVSTPAPATTQQSAPASTTAVTSSTTTTVAQAPTPVPALAPTSTPASITPASATASSE 136
Query: 259 P 261
P
Sbjct: 137 P 137
>AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens
cDNA FLJ46366 fis, clone TESTI4051388. ).
Length = 286
Score = 30.7 bits (66), Expect = 2.4
Identities = 29/78 (37%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +1
Query: 19 SRTKYTGQHRNFDCKRSARATPETVLAVAVSTPLERARPRPTPPLVSWSATP--ASATNT 192
+RT T S TP T A TP RA P TPP S TP AS T T
Sbjct: 91 TRTPPTASPARTPPTESPARTPPT--ASPARTP-PRASPTRTPPRASPRRTPSTASPTRT 147
Query: 193 PSLATARLPHSIATVART 246
P A+ R A+ RT
Sbjct: 148 PPRASPRRTPPRASPTRT 165
>AF489858-1|AAN03800.1| 493|Homo sapiens serum amyloid A activating
factor 2 protein.
Length = 493
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/62 (33%), Positives = 26/62 (41%)
Frame = +1
Query: 70 ARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVARTA 249
A A P A V T + P P PP SA A A S AT + A VA T+
Sbjct: 110 AAAPPAPAAASTVDTAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTS 169
Query: 250 SL 255
++
Sbjct: 170 TV 171
>AB018297-1|BAA34474.2| 1174|Homo sapiens KIAA0754 protein protein.
Length = 1174
Score = 30.7 bits (66), Expect = 2.4
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 67 SARATPE--TVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVA 240
+A TPE T A AV TP E A P P A+PA+A TP P ++ T
Sbjct: 843 AAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAP-AVPTPE 901
Query: 241 RTAS 252
+AS
Sbjct: 902 ESAS 905
Score = 30.7 bits (66), Expect = 2.4
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +1
Query: 67 SARATPETVL--AVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVA 240
+A TPE A AV TP E A P P P SA+ A A TP +A ++ T A
Sbjct: 869 AAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPEESASAAVAVPTPE-ESASPAAAVPTPA 927
Query: 241 RTAS 252
+AS
Sbjct: 928 ESAS 931
Score = 30.3 bits (65), Expect = 3.1
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +1
Query: 82 PETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATA 210
P+T AV VSTP E A P P +PA+A TP T+
Sbjct: 734 PDTA-AVRVSTPEEPASPAAAVPTPEEPTSPAAAVPTPEEPTS 775
Score = 28.7 bits (61), Expect = 9.5
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +1
Query: 67 SARATPE--TVLAVAVSTPLERARPRPTPPLVSWSATPASATNTP 195
+A TPE T A AV TP E P P A+PA+A TP
Sbjct: 830 AAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTP 874
>AB017335-2|BAA33064.1| 477|Homo sapiens Myc-associated zinc finger
protein protein.
Length = 477
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/62 (33%), Positives = 26/62 (41%)
Frame = +1
Query: 70 ARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVARTA 249
A A P A V T + P P PP SA A A S AT + A VA T+
Sbjct: 110 AAAPPAPAAASTVDTAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTS 169
Query: 250 SL 255
++
Sbjct: 170 TV 171
>BC041792-1|AAH41792.1| 562|Homo sapiens AT rich interactive domain
3B (BRIGHT-like) protein.
Length = 562
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 13 FSSRTKYTGQHRNFDCKRSARATPETVLAVAVSTPLERARPRPTPPLVSWS---ATPASA 183
F+ RT+Y ++C++ A ++P + A E RP + L +S AT A+A
Sbjct: 290 FTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPSYSSSLFGYSPAAATAAAA 349
Query: 184 TNTPSL 201
P+L
Sbjct: 350 AGAPAL 355
>AK127581-1|BAC87042.1| 980|Homo sapiens protein ( Homo sapiens
cDNA FLJ45676 fis, clone DFNES2011221. ).
Length = 980
Score = 30.3 bits (65), Expect = 3.1
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +1
Query: 82 PETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATA 210
P+T AV VSTP E A P P +PA+A TP T+
Sbjct: 851 PDTA-AVRVSTPEEPASPAAAVPTPEEPTSPAAAVPTPEEPTS 892
Score = 29.1 bits (62), Expect = 7.2
Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +1
Query: 67 SARATPE--TVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHS 225
+A TPE T A AV TP E P P +PA+A TP A HS
Sbjct: 921 AAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEDAPHPTTHS 975
>AF116846-1|AAD09133.1| 560|Homo sapiens bright and dead ringer
gene product homologous protein Bdp protein.
Length = 560
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 13 FSSRTKYTGQHRNFDCKRSARATPETVLAVAVSTPLERARPRPTPPLVSWS---ATPASA 183
F+ RT+Y ++C++ A ++P + A E RP + L +S AT A+A
Sbjct: 289 FTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPSYSSSLFGYSPAAATAAAA 348
Query: 184 TNTPSL 201
P+L
Sbjct: 349 AGAPAL 354
>AB208830-1|BAD92067.1| 476|Homo sapiens AT rich interactive domain
3B (BRIGHT- like) protein variant protein.
Length = 476
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 13 FSSRTKYTGQHRNFDCKRSARATPETVLAVAVSTPLERARPRPTPPLVSWS---ATPASA 183
F+ RT+Y ++C++ A ++P + A E RP + L +S AT A+A
Sbjct: 330 FTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPSYSSSLFGYSPAAATAAAA 389
Query: 184 TNTPSL 201
P+L
Sbjct: 390 AGAPAL 395
>AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein
protein.
Length = 580
Score = 29.9 bits (64), Expect = 4.1
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +1
Query: 43 HRNFDCKRSARATPETVLAVAVSTPL-ERARPRPTPPLVSWSATP--ASATNTPSLATAR 213
HR + RA+P + A T A P TPP S + TP A AT +PS A+
Sbjct: 118 HRASPMRTPPRASPTGTPSTASPTGTPSSASPTGTPPRASPTGTPPRAWATRSPSTASLT 177
Query: 214 LPHSIATVAR 243
S A++ R
Sbjct: 178 RTPSRASLTR 187
Score = 29.5 bits (63), Expect = 5.5
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +1
Query: 70 ARATPETVL--AVAVSTPLERARPRPTPPLVSWSATP--ASATNTPSLAT 207
+RA+P L A + +P RA P TPP S + TP AS T TPS A+
Sbjct: 100 SRASPTRRLPRASPMGSP-HRASPMRTPPRASPTGTPSTASPTGTPSSAS 148
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 29.9 bits (64), Expect = 4.1
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +1
Query: 82 PETVLAVAVSTPLERARPRPTPPLVSWSATPAS-----ATNTPSLATARLPHSIATVART 246
PE ++ STP R T +WS+T AS T +L AR P +I+T+ T
Sbjct: 3558 PEVGMSTMDSTPATERRTTSTEHPSTWSSTAASDSWTVTDMTSNLKVARSPGTISTMHTT 3617
Query: 247 ASL 255
+ L
Sbjct: 3618 SFL 3620
>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
protein.
Length = 1217
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 139 PTPPLVSWSATPASATNTPSLATARLPHSIATVARTAS 252
P+PP S TP + T TP+ T+R I + T S
Sbjct: 806 PSPPTTRTSETPVATTQTPTTLTSRRTTRITSQMTTQS 843
>AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein.
Length = 957
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 139 PTPPLVSWSATPASATNTPSLATARLPHSIATVARTAS 252
P+PP S TP + T TP+ T+R I + T S
Sbjct: 806 PSPPTTRTSETPVATTQTPTTLTSRRTTRITSQMTTQS 843
>AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein.
Length = 877
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 139 PTPPLVSWSATPASATNTPSLATARLPHSIATVARTAS 252
P+PP S TP + T TP+ T+R I + T S
Sbjct: 466 PSPPTTRTSETPVATTQTPTTLTSRRTTRITSQMTTQS 503
>AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 139 PTPPLVSWSATPASATNTPSLATARLPHSIATVARTAS 252
P+PP S TP + T TP+ T+R I + T S
Sbjct: 466 PSPPTTRTSETPVATTQTPTTLTSRRTTRITSQMTTQS 503
>Y09788-1|CAA70926.1| 845|Homo sapiens mucin protein.
Length = 845
Score = 29.5 bits (63), Expect = 5.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 165 CDSCFCNEHSFSCDSTPASLDSDGRP 242
C SC C+E S S P D+ G+P
Sbjct: 515 CQSCVCDEGSVSVQCKPLPCDAQGQP 540
>U95031-1|AAB65151.1| 879|Homo sapiens sublingual gland mucin
protein.
Length = 879
Score = 29.5 bits (63), Expect = 5.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 165 CDSCFCNEHSFSCDSTPASLDSDGRP 242
C SC C+E S S P D+ G+P
Sbjct: 565 CQSCVCDEGSVSVQCKPLPCDAQGQP 590
>U78551-1|AAC51343.1| 390|Homo sapiens mucin MUC5B protein.
Length = 390
Score = 29.5 bits (63), Expect = 5.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 165 CDSCFCNEHSFSCDSTPASLDSDGRP 242
C SC C+E S S P D+ G+P
Sbjct: 60 CQSCVCDEGSVSVQCKPLPCDAQGQP 85
>BC013354-1|AAH13354.1| 621|Homo sapiens acyl-Coenzyme A
dehydrogenase family, member 9 protein.
Length = 621
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -2
Query: 397 ILTNLFCYDAYLRSCFIL*QIYRVYNGKMSTETQNVQNALSQPKR*VQAMPFGR 236
+L N FC +AYL++ F L Q+ + + + + V + + + + A P R
Sbjct: 566 LLANTFCVEAYLQNLFSLSQLDKYAPENLDEQIKKVSQQILEKRAYICAHPLDR 619
>BC007970-1|AAH07970.1| 621|Homo sapiens acyl-Coenzyme A
dehydrogenase family, member 9 protein.
Length = 621
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -2
Query: 397 ILTNLFCYDAYLRSCFIL*QIYRVYNGKMSTETQNVQNALSQPKR*VQAMPFGR 236
+L N FC +AYL++ F L Q+ + + + + V + + + + A P R
Sbjct: 566 LLANTFCVEAYLQNLFSLSQLDKYAPENLDEQIKKVSQQILEKRAYICAHPLDR 619
>BC001817-1|AAH01817.2| 343|Homo sapiens ACAD9 protein protein.
Length = 343
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -2
Query: 397 ILTNLFCYDAYLRSCFIL*QIYRVYNGKMSTETQNVQNALSQPKR*VQAMPFGR 236
+L N FC +AYL++ F L Q+ + + + + V + + + + A P R
Sbjct: 288 LLANTFCVEAYLQNLFSLSQLDKYAPENLDEQIKKVSQQILEKRAYICAHPLDR 341
>AK024012-1|BAB14775.1| 621|Homo sapiens protein ( Homo sapiens
cDNA FLJ13950 fis, clone Y79AA1001048, weakly similar to
ACYL-COA DEHYDROGENASE, VERY-LONG-CHAIN SPECIFIC
PRECURSOR (EC ).
Length = 621
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -2
Query: 397 ILTNLFCYDAYLRSCFIL*QIYRVYNGKMSTETQNVQNALSQPKR*VQAMPFGR 236
+L N FC +AYL++ F L Q+ + + + + V + + + + A P R
Sbjct: 566 LLANTFCVEAYLQNLFSLSQLDKYAPENLDEQIKKVSQQILEKRAYICAHPLDR 619
>AK022568-1|BAB14104.1| 498|Homo sapiens protein ( Homo sapiens
cDNA FLJ12506 fis, clone NT2RM2001700, weakly similar to
ACYL-COA DEHYDROGENASE, VERY-LONG-CHAIN SPECIFIC (EC
1.3.99.-). ).
Length = 498
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -2
Query: 397 ILTNLFCYDAYLRSCFIL*QIYRVYNGKMSTETQNVQNALSQPKR*VQAMPFGR 236
+L N FC +AYL++ F L Q+ + + + + V + + + + A P R
Sbjct: 443 LLANTFCVEAYLQNLFSLSQLDKYAPENLDEQIKKVSQQILEKRAYICAHPLDR 496
>AJ011021-1|CAB56834.1| 466|Homo sapiens cardiac potassium channel
subunit (Kv6.2) protein.
Length = 466
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 242 ERHRLNLPLRLRQRVLHILRLRRHFAIVNSVNLLQNKTASQISIIAK*IC 391
ER L L L RVL+++RL RH + S+ L + A + ++ +C
Sbjct: 281 ERAGLVLRLLRALRVLYVMRLARHSLGLRSLGLTMRRCAREFGLLLLFLC 330
>AF327351-1|AAL56011.1| 621|Homo sapiens very-long-chain acyl-CoA
dehydrogenase VLCAD protein.
Length = 621
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -2
Query: 397 ILTNLFCYDAYLRSCFIL*QIYRVYNGKMSTETQNVQNALSQPKR*VQAMPFGR 236
+L N FC +AYL++ F L Q+ + + + + V + + + + A P R
Sbjct: 566 LLANTFCVEAYLQNLFSLSQLDKYAPENLDEQIKKVSQQILEKRAYICAHPLDR 619
>M61951-1|AAA59486.1| 1786|Homo sapiens laminin B1 protein.
Length = 1786
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 165 CDSCFCNEHSFSCDSTPASLDSDGRPNG 248
C C CNEHS SC A + G +G
Sbjct: 332 CKKCNCNEHSISCHFDMAVYLATGNVSG 359
>M61916-1|AAA59482.1| 1786|Homo sapiens laminin B1 protein.
Length = 1786
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 165 CDSCFCNEHSFSCDSTPASLDSDGRPNG 248
C C CNEHS SC A + G +G
Sbjct: 332 CKKCNCNEHSISCHFDMAVYLATGNVSG 359
>M55370-1|AAA59485.1| 1786|Homo sapiens laminin B1 protein.
Length = 1786
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 165 CDSCFCNEHSFSCDSTPASLDSDGRPNG 248
C C CNEHS SC A + G +G
Sbjct: 332 CKKCNCNEHSISCHFDMAVYLATGNVSG 359
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 28.7 bits (61), Expect = 9.5
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = +1
Query: 76 ATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVARTAS 252
A P+T A P + AR RP+P + A P N PS P + R AS
Sbjct: 406 AVPQTQNHAAYYPPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFSTMRPAS 464
>BC113455-1|AAI13456.1| 1786|Homo sapiens laminin, beta 1 protein.
Length = 1786
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 165 CDSCFCNEHSFSCDSTPASLDSDGRPNG 248
C C CNEHS SC A + G +G
Sbjct: 332 CKKCNCNEHSISCHFDMAVYLATGNVSG 359
>BC091514-1|AAH91514.1| 671|Homo sapiens sorbin and SH3 domain
containing 3 protein.
Length = 671
Score = 28.7 bits (61), Expect = 9.5
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 85 ETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATAR--LPHSIA 231
ET L S+P R P PP SA +S + P L +AR PH +A
Sbjct: 294 ETRLPSPKSSPAPRRAPEQRPPAGPASAWSSSYPHAPYLGSARSLSPHKMA 344
>BC067260-1|AAH67260.2| 671|Homo sapiens sorbin and SH3 domain
containing 3 protein.
Length = 671
Score = 28.7 bits (61), Expect = 9.5
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 85 ETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATAR--LPHSIA 231
ET L S+P R P PP SA +S + P L +AR PH +A
Sbjct: 294 ETRLPSPKSSPAPRRAPEQRPPAGPASAWSSSYPHAPYLGSARSLSPHKMA 344
>BC066647-1|AAH66647.1| 1457|Homo sapiens KIAA0586 protein protein.
Length = 1457
Score = 28.7 bits (61), Expect = 9.5
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 76 ATPETVLAVAVSTPLERARPRPTPPL-VSWSATPASATNTPSLATARLPHSIA 231
+T ET L V TPL A P+PTPP S A TP + H +A
Sbjct: 950 STNETYLPARVCTPL--ATPQPTPPCSPSSPAKECVLVKTPDSSPCDSDHDMA 1000
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 28.7 bits (61), Expect = 9.5
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = +1
Query: 76 ATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVARTAS 252
A P+T A P + AR RP+P + A P N PS P + R AS
Sbjct: 406 AVPQTQNHAAYYPPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFSTMRPAS 464
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 28.7 bits (61), Expect = 9.5
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = +1
Query: 76 ATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVARTAS 252
A P+T A P + AR RP+P + A P N PS P + R AS
Sbjct: 406 AVPQTQNHAAYYPPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFSTMRPAS 464
>AF451977-1|AAL49758.1| 1431|Homo sapiens cask-interacting protein 1
protein.
Length = 1431
Score = 28.7 bits (61), Expect = 9.5
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +1
Query: 67 SARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSL-ATARLPHSIATVAR 243
S A P + A P A+P TPP + S + P+L A+ P + A A
Sbjct: 1292 SGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAA 1351
Query: 244 TASLEP 261
A+ P
Sbjct: 1352 AAAAPP 1357
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 28.7 bits (61), Expect = 9.5
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = +1
Query: 76 ATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATARLPHSIATVARTAS 252
A P+T A P + AR RP+P + A P N PS P + R AS
Sbjct: 406 AVPQTQNHAAYYPPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFSTMRPAS 464
>AF037261-1|AAC09244.1| 671|Homo sapiens SH3-containing adaptor
molecule-1 protein.
Length = 671
Score = 28.7 bits (61), Expect = 9.5
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 85 ETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSLATAR--LPHSIA 231
ET L S+P R P PP SA +S + P L +AR PH +A
Sbjct: 294 ETRLPSPKSSPAPRRAPEQRPPAGPASAWSSSYPHAPYLGSARSLSPHKMA 344
>AB037727-1|BAA92544.1| 1154|Homo sapiens KIAA1306 protein protein.
Length = 1154
Score = 28.7 bits (61), Expect = 9.5
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +1
Query: 67 SARATPETVLAVAVSTPLERARPRPTPPLVSWSATPASATNTPSL-ATARLPHSIATVAR 243
S A P + A P A+P TPP + S + P+L A+ P + A A
Sbjct: 1015 SGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAA 1074
Query: 244 TASLEP 261
A+ P
Sbjct: 1075 AAAAPP 1080
>AB011158-1|BAA25512.2| 1576|Homo sapiens KIAA0586 protein protein.
Length = 1576
Score = 28.7 bits (61), Expect = 9.5
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 76 ATPETVLAVAVSTPLERARPRPTPPL-VSWSATPASATNTPSLATARLPHSIA 231
+T ET L V TPL A P+PTPP S A TP + H +A
Sbjct: 1069 STNETYLPARVCTPL--ATPQPTPPCSPSSPAKECVLVKTPDSSPCDSDHDMA 1119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,576,512
Number of Sequences: 237096
Number of extensions: 934553
Number of successful extensions: 5088
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 4532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5070
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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