Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11l09
(801 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0503 - 17848739-17849004,17849109-17849268,17849368-178496... 85 6e-17
02_05_1140 + 34386042-34386302,34386738-34386917,34386999-343870... 65 7e-11
03_01_0012 - 101584-101898,102274-102531,102932-103474 62 4e-10
01_06_0737 + 31592562-31592786,31593314-31593541,31593981-315940... 60 2e-09
10_08_0923 + 21597593-21597629,21598089-21598135,21598253-215983... 56 3e-08
04_03_0559 + 17118319-17118396,17119329-17119467,17119569-171196... 51 1e-06
04_03_0629 + 18179065-18179148,18180146-18180287,18180987-181810... 45 8e-05
09_04_0636 + 19150966-19151037,19151150-19151291,19151404-191514... 44 1e-04
09_04_0404 + 17322664-17322718,17323676-17323849,17324695-173248... 43 2e-04
09_04_0641 + 19172370-19172459,19172539-19172680,19172951-191730... 43 3e-04
08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 36 0.038
09_04_0030 + 13940168-13940250,13940703-13941714 34 0.15
06_03_0679 - 23464009-23464381,23464804-23464886,23466537-234667... 33 0.20
02_01_0656 - 4870315-4870975,4872018-4872245,4872874-4872987,487... 33 0.20
09_04_0029 - 13932414-13933416,13933821-13933903 33 0.26
10_08_0101 - 14789994-14790205,14790290-14790957,14791232-147913... 33 0.35
09_04_0028 - 13928542-13929538,13929736-13929818 32 0.61
06_03_0417 + 20576716-20576742,20578110-20578345,20578347-205786... 29 3.3
02_04_0451 + 23021139-23021269,23021366-23021498,23021594-230217... 29 3.3
11_06_0515 - 24483282-24483478,24486451-24486927,24486949-24489580 29 5.7
05_04_0288 + 19839597-19839821,19841882-19842107,19842494-198425... 29 5.7
01_01_0167 + 1422344-1424260,1424338-1424472,1424568-1424990,142... 29 5.7
11_06_0720 - 26617665-26617781,26617851-26617924,26618218-266183... 28 7.5
10_02_0173 + 6191676-6191764,6192147-6192260,6192411-6192638,619... 28 7.5
03_05_1127 + 30587488-30588291 28 7.5
11_06_0764 + 27108979-27110018,27110176-27112270 28 9.9
02_01_0014 - 87215-87280,87358-87495,87593-87721,87801-87869,879... 28 9.9
>08_02_0503 -
17848739-17849004,17849109-17849268,17849368-17849691,
17849787-17850209
Length = 390
Score = 85.0 bits (201), Expect = 6e-17
Identities = 56/143 (39%), Positives = 85/143 (59%), Gaps = 8/143 (5%)
Frame = -3
Query: 796 AGVVVAKGQSXKTFNIGDEVFFTGDHR------RNGSNAQYVALDEVLVGTKPKKLTFEQ 635
AGVVV G+ K GDEV+ + ++GS A+Y A++E L+ KPK L F Q
Sbjct: 149 AGVVVKAGRKVKGLKEGDEVYGNISEKALEGPKQSGSLAEYTAVEEKLLALKPKSLGFAQ 208
Query: 634 AAAMPLTSVTAYECIYDRLLISSKDKGRTLLIINSAGGVGSVASQMAKNL--GLKVIGTA 461
AA +PL TA+E + +R S+ G+++LI+ AGGVGS+A Q+AK++ KV TA
Sbjct: 209 AAGLPLAIETAHEGL-ERAGFSA---GKSILILGGAGGVGSLAIQLAKHVYGASKVAATA 264
Query: 460 SRPETQEFSLQHGTDIVLNHTQD 392
S P+ E G D+ +++T++
Sbjct: 265 STPKL-ELLKSLGADVAIDYTKE 286
>02_05_1140 +
34386042-34386302,34386738-34386917,34386999-34387080,
34387180-34387287,34387442-34387630,34387814-34388010
Length = 338
Score = 64.9 bits (151), Expect = 7e-11
Identities = 67/280 (23%), Positives = 134/280 (47%), Gaps = 15/280 (5%)
Frame = -3
Query: 796 AGVVVAKGQSXKT-FNIGDEVFFTGDHRRNGSNAQYVALDEVLVGTKPKKLTFEQAAAMP 620
+G ++A G + + + +GD+V +G A+ V + + P+ ++ AA +P
Sbjct: 68 SGTILALGPNVPSRWAVGDQVCAL---LSSGGYAEKVVVPAGQLLPVPEGVSLTDAAGLP 124
Query: 619 LTSVTAYECIYDRLLISSKDKGRTLLIINSAGGVGSVASQMAKNLGLKVIGTASRPETQE 440
+ T + ++ + S + LI + G+G+ A Q+AK+LG+KV TA E
Sbjct: 125 EVACTVWSTVF---VTSHLSPSESFLIHGGSSGIGTFAIQIAKHLGIKVFVTAGSEEKLA 181
Query: 439 FSLQHGTDIVLNH-TQDLIPQLVAQGHGN----------GVDFILVNYDPFPYWDTLMKA 293
G D+ +N+ T+D + ++ + +G GVD IL N Y + +
Sbjct: 182 ACKGLGADVCINYKTEDFVARVKEETNGKVTLDMEVYLPGVDVILDNIGGL-YLQRNLNS 240
Query: 292 IKPQGRICLIVDSSGL---VDLRPLKDKSVTLVSEMMFTRIKYDTEDKIRHHQILEQISK 122
+ GR+ +I G V+L+P+ + +T+ + + R D + I ++ + +
Sbjct: 241 LAVDGRLFIIGFQGGAVTEVNLQPMLARRLTIQAAGLRNR-SLDNKALI-VSEVEKNVWP 298
Query: 121 WLDKGELKHTLTNTLSPINAANLREAHRLIEQQGMIGKLV 2
+ +G++K + T P++ A EAH+L+E+ IGK++
Sbjct: 299 AVVQGKVKPVIYKTF-PLSEA--AEAHKLMEESSHIGKIL 335
>03_01_0012 - 101584-101898,102274-102531,102932-103474
Length = 371
Score = 62.5 bits (145), Expect = 4e-10
Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Frame = -3
Query: 793 GVVVAKGQSXKTFNIGDEVFFTGDHRRNGSNAQYVALDEVLVGTKPKKLTFEQAAAMPLT 614
GVV A G +GD V + G+ GS AQ + + P + AAA+ L
Sbjct: 111 GVVTAVGPGLTGRKVGDVVAYAGNPM--GSYAQEQIIPASVAVPLPPSIDHNTAAAIMLK 168
Query: 613 SVTAYECIYDRLLISSKDKGRTLLIINSAGGVGSVASQMAKNLGLKVIGTASRPETQEFS 434
+TA+ + + S D +L+ +AGGVGS+ Q A LG VIGT S E +
Sbjct: 169 GMTAHVLLRRVYKVQSGD---CVLVHAAAGGVGSLLCQWANALGATVIGTVSNEEKAAQA 225
Query: 433 LQHGTDIVLNHT-QDLIPQLVAQGHGNGVDFILVNYDPFPYWDTLMKAIKPQGRICLIVD 257
+ G V+ +T +D++ ++ G GV+ + + Y + ++ + +G +
Sbjct: 226 AEDGCHHVIIYTKEDVVTRVKEFTAGKGVNVVYDSVGKDTYKGS-VECLAWRGMLVSFGQ 284
Query: 256 SSGLVDLRPLKD 221
SSG D PL D
Sbjct: 285 SSGRPDPIPLSD 296
>01_06_0737 +
31592562-31592786,31593314-31593541,31593981-31594054,
31594595-31594754,31595979-31596098,31596185-31596293,
31597447-31597628
Length = 365
Score = 60.5 bits (140), Expect = 2e-09
Identities = 70/272 (25%), Positives = 117/272 (43%), Gaps = 7/272 (2%)
Frame = -3
Query: 796 AGVVVAKGQSXKTFNIGDEVFFTGDHRR-NGSNAQYVALDEVLVGTKPKKLTFEQAAAMP 620
+G V A G S +F IG EVF G+ Y L + + +KP L+ +A+A+P
Sbjct: 98 SGEVAATGTSVSSFTIGQEVFGALHPTAIRGTYTDYAILSQDELTSKPSTLSHVEASAIP 157
Query: 619 LTSVTAYECIYDRLLISSKDKGRTLLIINSAGGVGSVASQMAKNLGLKVIGTASRPETQE 440
++TA+ ++ IS +G+ +L+I G VG A Q+A G V T ++
Sbjct: 158 FAALTAWRALHGTARIS---EGQRVLVIGGGGAVGLAAVQLAVAAGCSVSATCGTKSIEQ 214
Query: 439 FSLQHGTDIVLNHTQDLIPQLVAQGHGNGVDFILVNYDPFPYWDTLMKA---IKPQGRIC 269
L G + +++T + V +D I V + L + + QG
Sbjct: 215 V-LAAGAEKAIDYTAEDTESAVKGKFDAVLDTIGVPETERIGINVLRRGGHYMTLQGEAA 273
Query: 268 LIVDSSGLVDLRPLKDKSVTLVSEMMFT---RIKYDTEDKIRHHQILEQISKWLDKGELK 98
+ D GL P +V L +M + I Y + L +I + G+L+
Sbjct: 274 ALADRYGLAVGLPAA-TAVLLKKQMQYRYSHGIDYWWTYMRADSEGLHEIQRLSGAGKLQ 332
Query: 97 HTLTNTLSPINAANLREAHRLIEQQGMIGKLV 2
+ T PI + +REAH E++ + GK+V
Sbjct: 333 IPVEKTF-PI--SKVREAHEAKEKRLVPGKVV 361
>10_08_0923 +
21597593-21597629,21598089-21598135,21598253-21598391,
21598449-21598562,21599206-21599432,21599578-21599835,
21600014-21600304,21600766-21600830,21601116-21601299,
21601857-21601964
Length = 489
Score = 56.0 bits (129), Expect = 3e-08
Identities = 60/219 (27%), Positives = 93/219 (42%), Gaps = 4/219 (1%)
Frame = -3
Query: 793 GVVVAKGQSXKTFNIGDEVFFTGDHRRNGSNAQYVALDEVLVGTKPKKLTFEQAAAMPLT 614
GVV A G +GD V + G+ + + L P + AA++ L
Sbjct: 118 GVVSAVGPGVTGIEVGDVVGYADTPM--GTYTEEQIIPATLAIPIPPSVDHITAASVLLK 175
Query: 613 SVTAYECIYDRLLISSKDKGRTLLIINSAGGVGSVASQMAKNLGLKVIGTASRPETQEFS 434
+T Y + I + G T+L+ +AGGVGS+ Q A LG VIGT S E +
Sbjct: 176 GMTTYVLVKQAFKIQA---GHTVLVHAAAGGVGSLLCQWANALGATVIGTVSTQEKAIQA 232
Query: 433 LQHGTDIVLNHT-QDLIPQL--VAQGHGNGVDFILVNYDPFPYWDTLMKAIKPQGRICLI 263
+ G V+ +T +D + Q+ + G V + V D F M+ + P+G +
Sbjct: 233 AEDGCHHVIIYTEEDFVAQVAEITSRKGVHVVYDAVGKDTF---KGSMECLMPRGCMISY 289
Query: 262 VDSSGLVDLRPLKD-KSVTLVSEMMFTRIKYDTEDKIRH 149
SG D P+ D S +L+ R T D++ H
Sbjct: 290 GQCSGRPDPVPVSDLASKSLILGRPGMRHYTATRDELLH 328
>04_03_0559 +
17118319-17118396,17119329-17119467,17119569-17119660,
17119974-17120660
Length = 331
Score = 50.8 bits (116), Expect = 1e-06
Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 1/174 (0%)
Frame = -3
Query: 796 AGVVVAKGQSXKTFNIGDEVFFTGDHRRNGSNAQYVALDEVLVGTKPKKLTFEQAAAMPL 617
+G V+ G + F +GD+V + + G A+YVA E ++P ++ AA +P+
Sbjct: 77 SGEVIEVGSAIHEFKVGDKVVSKLNLWKAGGLAEYVAASESDTVSRPAGISAADAAGLPV 136
Query: 616 TSVTAYECIYD-RLLISSKDKGRTLLIINSAGGVGSVASQMAKNLGLKVIGTASRPETQE 440
+TA + + G +LI ++ GVG+ A Q+AK LG + T +
Sbjct: 137 AGLTALQALSSIGTKFDGSGTGADVLITAASSGVGTYAVQLAK-LGNHRVTTTCGARNLD 195
Query: 439 FSLQHGTDIVLNHTQDLIPQLVAQGHGNGVDFILVNYDPFPYWDTLMKAIKPQG 278
G D VL++ L A G D+I +N W + G
Sbjct: 196 LVGSLGADEVLDYATPEGAAL-ASPSGRKYDYI-INLTDRGKWSVFRPQLSSNG 247
>04_03_0629 +
18179065-18179148,18180146-18180287,18180987-18181078,
18181272-18181964
Length = 336
Score = 44.8 bits (101), Expect = 8e-05
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
Frame = -3
Query: 796 AGVVVAKGQSXKTFNIGDEVFFTGDHRRNGSNAQYVALDEVLVGTKPKKLTFEQAAAMPL 617
AGVV G F +GD+V + G A+Y L + ++ + A +P+
Sbjct: 80 AGVVAGVGPGVNDFAVGDQVVAMLNSMNGGGLAEYAVAAANLTVKRTPNVSAAEGAGLPI 139
Query: 616 TSVTAYECIYD-RLLISSKDKGRTLLIINSAGGVGSVASQMAKNLGLKVIGTASRPETQE 440
+ TA + + + +L+ ++GGVG A Q+AK L V T E
Sbjct: 140 AAGTALQALRSIGAKFDGTGEPLNVLVTAASGGVGLYAVQLAKLANLHVTATCG-ARNAE 198
Query: 439 FSLQHGTDIVLNH 401
G D VL++
Sbjct: 199 LVRGLGADEVLDY 211
>09_04_0636 +
19150966-19151037,19151150-19151291,19151404-19151492,
19151589-19152308
Length = 340
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Frame = -3
Query: 796 AGVVVAKGQSXKTFNIGDEVFFTGDHRRNGSNAQYVALDEVLVGTKPKKLTFEQAAAMPL 617
AG VV G+ +F +GD+V + G A+Y +P +++ A +P+
Sbjct: 76 AGEVVELGRGVSSFKVGDKVIAI-NFPGGGGLAEYAVAQASRTAPRPPEVSAAVGACLPI 134
Query: 616 TSVTAYECIYDR-LLISSKDKG-----RTLLIINSAGGVGSVASQMAKNLGLKVIGT 464
+VTA + + + + D G + +L+ ++GGVG A Q+A G +V T
Sbjct: 135 AAVTALVALRTAGVSLDAGDGGGGGAKKNVLVTAASGGVGHFAVQLASAAGHRVTAT 191
>09_04_0404 +
17322664-17322718,17323676-17323849,17324695-17324876,
17325312-17325417,17325708-17325784,17326485-17326572,
17327320-17327509,17328353-17328479,17328584-17328664,
17328815-17328916,17329042-17329137,17329279-17329353,
17329746-17329865,17330319-17330447,17330762-17330839,
17331330-17331416,17333538-17333651,17334294-17334362,
17334741-17334785
Length = 664
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/98 (27%), Positives = 45/98 (45%)
Frame = -3
Query: 556 GRTLLIINSAGGVGSVASQMAKNLGLKVIGTASRPETQEFSLQHGTDIVLNHTQDLIPQL 377
G+ +L+ +AGG G A Q+AK G KV+ T G D V+N+ + I +
Sbjct: 433 GQVVLVTAAAGGTGQFAVQLAKLAGNKVVATCGGKCKAALLSSLGVDRVINYQNEKIKDV 492
Query: 376 VAQGHGNGVDFILVNYDPFPYWDTLMKAIKPQGRICLI 263
+ + G D I + +D + A+ GR+ +I
Sbjct: 493 LKKEFPRGADIIYESVGG-EMFDLCLNALAVHGRLIVI 529
>09_04_0641 +
19172370-19172459,19172539-19172680,19172951-19173039,
19173096-19173806
Length = 343
Score = 42.7 bits (96), Expect = 3e-04
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 12/144 (8%)
Frame = -3
Query: 796 AGVVVAKGQSXKTFNIGDEVF---------FTGD--HRRNGSNAQYVALDEVLVGTKPKK 650
AG V A G + F +GD+V F D + G A+Y L +P +
Sbjct: 82 AGKVAAVGGGVRRFELGDKVIAINFPLSSVFECDLSEQSGGGFAEYAVAQASLTVERPPE 141
Query: 649 LTFEQAAAMPLTSVTAYECIYDR-LLISSKDKGRTLLIINSAGGVGSVASQMAKNLGLKV 473
++ + A +PL +VTA + + + + +L+ ++GGVG A Q+A+ G +V
Sbjct: 142 VSAAEGACLPLAAVTALQALRAAGAGLDDAPPPKNVLVTAASGGVGHFAVQLARLGGHRV 201
Query: 472 IGTASRPETQEFSLQHGTDIVLNH 401
T + + G D L++
Sbjct: 202 TATCGARNLALVAGELGADEALDY 225
>08_01_0065 +
452383-452629,452733-452868,453049-453118,453237-453330,
453426-453639,453756-453897,454076-454246,454586-454780
Length = 422
Score = 35.9 bits (79), Expect = 0.038
Identities = 50/239 (20%), Positives = 94/239 (39%), Gaps = 3/239 (1%)
Frame = -3
Query: 709 GSNAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRTLLIINS 530
G A+Y + + P L + ++A + TAY + + + D + +
Sbjct: 192 GGLAEYCVVPANALAVLPNSLPYTESAILGCAVFTAYGALRHAAEMRAGDS----VAVIG 247
Query: 529 AGGVGSVASQMAKNLGL-KVIGTASRPETQEFSLQHGTDIVLNHT-QDLIPQLVAQGHGN 356
GGVGS Q+AK G +VI E + + G +N +D + ++ G
Sbjct: 248 VGGVGSSCLQIAKAFGASEVIAVDVLDEKLQNARTLGATHTVNAAKEDAVEKIKEITDGR 307
Query: 355 GVDFILVNYDPFPYWDTLMKAIKPQGRICLIVDSSGLVDLRPLKDKSVTLVSEMMFTRIK 176
GVD + + K+++ G+ +I GL + + +T ++ ++K
Sbjct: 308 GVDVAVEALGKALTFSQCAKSVRDGGKAVMI----GLAATNVMGEVDIT---RLVRRQVK 360
Query: 175 YDTEDKIRHHQILEQISKWLDKGELKHTLTNTLS-PINAANLREAHRLIEQQGMIGKLV 2
R Q L QI K + G L NT+S A+ +++ ++G+ V
Sbjct: 361 IIGSYGARARQDLPQIVKLAESGAF--NLKNTISRKCKFEEANSAYEDLDRGKIVGRAV 417
>09_04_0030 + 13940168-13940250,13940703-13941714
Length = 364
Score = 33.9 bits (74), Expect = 0.15
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = -3
Query: 727 GDHRRNGSNAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRT 548
G G + + ++E V P L + AA + VT +Y ++I +
Sbjct: 128 GGAATQGGFSDAIVVNEHYVLRVPAGLPLDSAAPLLCAGVT----VYSPMVIHGLNAPGK 183
Query: 547 LLIINSAGGVGSVASQMAKNLGLKVIGTASRPETQEFSLQH-GTD 416
+ + GG+G VA + AK G++V ++ P ++ +L+H G D
Sbjct: 184 HVGVVGLGGLGHVAVKFAKAFGMRVTVISTSPGKRQEALEHLGAD 228
>06_03_0679 -
23464009-23464381,23464804-23464886,23466537-23466703,
23466821-23467007,23467093-23467311
Length = 342
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = -3
Query: 631 AAMPLTSVTAYECIYDRLLISSKDKGRTLLIINSAGGVGSVASQMAKNLGLKVIGTA 461
+A+ + +TAY +Y+ + + G + + ++G VGS+ Q AK G V+G A
Sbjct: 133 SALGTSGMTAYAGLYE---VGRPEAGEKVFVSAASGSVGSLVGQFAKLAGCYVVGCA 186
>02_01_0656 -
4870315-4870975,4872018-4872245,4872874-4872987,
4873813-4873901
Length = 363
Score = 33.5 bits (73), Expect = 0.20
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 2/159 (1%)
Frame = -3
Query: 733 FTGDHRRNGSNAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSKDKG 554
+T G A + +D+ V P L EQAA + +T Y + L+S +G
Sbjct: 125 YTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGLTVYSPLKHFGLMSPGLRG 184
Query: 553 RTLLIINSAGGVGSVASQMAKNLG--LKVIGTASRPETQEFSLQHGTDIVLNHTQDLIPQ 380
L GGVG + ++AK++G + VI +++R + G D L + D
Sbjct: 185 GVL----GLGGVGHMGVKVAKSMGHHVTVISSSARKRGEAMD-DLGADAYL-VSSDAAAM 238
Query: 379 LVAQGHGNGVDFILVNYDPFPYWDTLMKAIKPQGRICLI 263
A G+ +D+I+ + + +K G++ L+
Sbjct: 239 AAA---GDSLDYIIDTVPVHHPLEPYLALLKLDGKLILM 274
>09_04_0029 - 13932414-13933416,13933821-13933903
Length = 361
Score = 33.1 bits (72), Expect = 0.26
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 1/145 (0%)
Frame = -3
Query: 727 GDHRRNGSNAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRT 548
G G + + ++E V P L + AA + VT +Y ++I +
Sbjct: 125 GGAATQGGFSDAIVVNEHYVLRVPAGLPLDGAAPLLCAGVT----VYSPMVIHGLNAPGK 180
Query: 547 LLIINSAGGVGSVASQMAKNLGLKVIGTASRPETQEFSLQH-GTDIVLNHTQDLIPQLVA 371
+ + GG+G VA + AK G++V ++ P + +L+H G D L ++D A
Sbjct: 181 HVGVVGLGGLGHVAVKFAKAFGMRVTVISTSPGKRREALEHLGADEFL-VSRDAGQMAAA 239
Query: 370 QGHGNGVDFILVNYDPFPYWDTLMK 296
G +G+ + + P LMK
Sbjct: 240 AGTMDGILNTVSAWHPVAPLFALMK 264
>10_08_0101 -
14789994-14790205,14790290-14790957,14791232-14791345,
14794826-14794932
Length = 366
Score = 32.7 bits (71), Expect = 0.35
Identities = 34/151 (22%), Positives = 61/151 (40%), Gaps = 2/151 (1%)
Frame = -3
Query: 709 GSNAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECI-YDRLLISSKDKGRTLLIIN 533
G + V + E V P+ + + A + +T Y + Y L K G +
Sbjct: 139 GGYSSMVVVHERFVVMFPEAMPLDVGAPLLCAGITVYTPMKYHGLNAPGKHVG-----VL 193
Query: 532 SAGGVGSVASQMAKNLGLKVIGTASRPETQEFSLQH-GTDIVLNHTQDLIPQLVAQGHGN 356
GG+G VA + A+ GLKV +S P + +L+ G D + + +
Sbjct: 194 GLGGLGHVAVKFARAFGLKVTVISSSPGKKREALERLGADAFVVSSSAEEMEAARSTMDG 253
Query: 355 GVDFILVNYDPFPYWDTLMKAIKPQGRICLI 263
++ + N PY + +KP G++ L+
Sbjct: 254 VINTVSANTPMAPY----LALLKPNGKMILV 280
>09_04_0028 - 13928542-13929538,13929736-13929818
Length = 359
Score = 31.9 bits (69), Expect = 0.61
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Frame = -3
Query: 706 SNAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRTLLIINSA 527
S+ V D VL P L + AA + VT Y + + L + G+ L ++
Sbjct: 134 SDVMVVRQDYVL--RVPASLPPDGAAPLLCAGVTVYSPMVEYGLNAP---GKHLGVVG-L 187
Query: 526 GGVGSVASQMAKNLGLKVIGTASRPETQEFSLQH-GTDIVLNHTQDLIPQLVAQGHGNG- 353
GG+G + + K G+KV +S P +E +L+ G D L+ ++D A +G
Sbjct: 188 GGLGHLGVKFGKAFGMKVTVISSSPAKREEALERLGADAFLS-SRDGEGMAAAAATMDGI 246
Query: 352 VDFILVNYDPFPYWDTLMKAIKPQGRICLI 263
+D + + P L+ +KP+G++ ++
Sbjct: 247 IDTVSAGHPLVP----LLSLLKPKGQMVVV 272
>06_03_0417 +
20576716-20576742,20578110-20578345,20578347-20578601,
20578731-20579298
Length = 361
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = -3
Query: 649 LTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRTLLIINS 530
+TFEQ VTAY D L+ S +D R LLII+S
Sbjct: 96 ITFEQTRPFTPGHVTAYAIFMDSLVTSPEDM-RLLLIISS 134
>02_04_0451 +
23021139-23021269,23021366-23021498,23021594-23021789,
23023376-23023737,23024049-23024363
Length = 378
Score = 29.5 bits (63), Expect = 3.3
Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 17/208 (8%)
Frame = -3
Query: 688 ALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRTLLIINSAGGVGSV 509
+L + LVG +P+ L A L A EC++ +I K LL+ V V
Sbjct: 109 SLRKYLVGLRPRSLEPRVAVGFALDIARAMECLHAHAIIHRDLKPENLLLTADQRTVKLV 168
Query: 508 ASQMAKNLGLKVIGTAS-------RPE---TQEFSLQHGTDIVLNHTQDLIPQL---VAQ 368
+A+ L + TA PE T Q+ + + + ++ PQL V
Sbjct: 169 DLGLAREETLTEMMTAETGTYRWMAPEVSVTAVHICQYNSFLSIFANPEIYPQLYSTVTL 228
Query: 367 GHGNGVDF---ILVNYDPFPYWDTLMKAIKPQGRICL-IVDSSGLVDLRPLKDKSVTLVS 200
HG + + V W+ L + +G L ++ ++RP D +S
Sbjct: 229 RHGEKKHYNHKVDVYSFAIVLWELLHNRLPFEGMSNLQAAYAAAFKNIRPSADNLPEELS 288
Query: 199 EMMFTRIKYDTEDKIRHHQILEQISKWL 116
E++ T K + ++ QI++ + +L
Sbjct: 289 EILTTCWKEEPNERPNFTQIVQMLLHYL 316
>11_06_0515 - 24483282-24483478,24486451-24486927,24486949-24489580
Length = 1101
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 337 VNYDPFPYWDTLMKAIKPQGRICLIVDSSGLV 242
V +P WD LM A P GRI L + ++
Sbjct: 282 VGQHDWPEWDNLMLAFPPNGRILLTTRTPSII 313
>05_04_0288 +
19839597-19839821,19841882-19842107,19842494-19842582,
19845184-19845387,19845463-19845717,19845796-19846011,
19846611-19846766,19846880-19847039,19847702-19847788,
19847789-19847940,19848006-19848143,19848714-19848788,
19849166-19849444
Length = 753
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -3
Query: 313 WDTLMKAIKPQGRICLIVDSSGLVDLRPLKDKSVTLVSEMMFTRIKYDTEDKIRHHQILE 134
+D + ++ P G + LI+ + L D S L M RI E + +ILE
Sbjct: 513 FDNFLFSVSPYGFLLLIIKFDDICTLSGKADLSDLLTG--MDGRITKAREHALSRKEILE 570
Query: 133 QISKW 119
++ KW
Sbjct: 571 KVEKW 575
>01_01_0167 +
1422344-1424260,1424338-1424472,1424568-1424990,
1425183-1425252,1425356-1425495,1425620-1425679,
1425776-1425931,1426272-1426541
Length = 1056
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = -3
Query: 352 VDFILVNYDPFPYWDTLMKAIKPQGRICLIVDSSGLVDLRPLKDKSVTLVSEMMFTRIK- 176
+D ++V F + D + A P G++ L+ D S +VDL+ + + VS RI+
Sbjct: 125 IDSVVVMDRSFLHGDIVASATDPTGQMGLVADVSLVVDLQGPHGEIIKGVSSKDLRRIRE 184
Query: 175 YDTEDKIRHHQILEQISKWLD 113
++ D + L ++ + LD
Sbjct: 185 FNVGDYVVSGPWLGRVDEVLD 205
>11_06_0720 -
26617665-26617781,26617851-26617924,26618218-26618331,
26619375-26619399,26619564-26619620,26620273-26622888
Length = 1000
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 247 LVDLRPLKDKSVTLVSEMMFTRIKYDTEDKIRHHQILEQISK 122
L++L P D + L+S + T ++ DK+R H I+K
Sbjct: 745 LLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININK 786
>10_02_0173 +
6191676-6191764,6192147-6192260,6192411-6192638,
6192898-6193183,6193350-6193500,6193615-6193811
Length = 354
Score = 28.3 bits (60), Expect = 7.5
Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Frame = -3
Query: 709 GSNAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRTLLIINS 530
G + ++ + E P E+AA + +T Y + + G++L +I
Sbjct: 133 GGYSTHIVVHERYCFKIPDGYPLEKAAPLLCAGITVYSPMMRH---NMNQPGKSLGVIG- 188
Query: 529 AGGVGSVASQMAKNLGLK--VIGTASRPETQEFSLQHGTDIVLNHTQDLIPQL 377
GG+G +A + K GLK VI T+ + L + V++ ++ + L
Sbjct: 189 LGGLGHMAVKFGKAFGLKVTVISTSESKRKEAIDLLGADNFVVSSDENQMETL 241
>03_05_1127 + 30587488-30588291
Length = 267
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 556 GRTLLIINSAGGVGSVASQMAKNLGLKV 473
GR ++ AGG+GS S+ +LG +V
Sbjct: 12 GRVAIVTGGAGGIGSAVSRHLASLGARV 39
>11_06_0764 + 27108979-27110018,27110176-27112270
Length = 1044
Score = 27.9 bits (59), Expect = 9.9
Identities = 27/86 (31%), Positives = 36/86 (41%)
Frame = -3
Query: 664 TKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRTLLIINSAGGVGSVASQMAKNL 485
TKP+ ++ ++ M T E + L DKGR +L I GGVG MA L
Sbjct: 173 TKPQIVSIKEPVGMK----TVMENLEKWLTEPQPDKGRAVLSIVGFGGVGKTTIAMA--L 226
Query: 484 GLKVIGTASRPETQEFSLQHGTDIVL 407
KV G + S + D VL
Sbjct: 227 YRKVSGKFDCQASVAVSQNYDEDEVL 252
>02_01_0014 -
87215-87280,87358-87495,87593-87721,87801-87869,
87962-88042,88133-88237,88338-88568,88665-90197,
90660-90752,91477-92887,93184-93305,93479-93718,
94521-94682,94770-94937,95025-95141,95266-95376,
95919-96506
Length = 1787
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = -3
Query: 553 RTLLIINSAGGVGSVASQMAKNLGLKVIGTASRPETQEFSLQHGTDIVLNHTQDLIPQLV 374
+TLL++ +G + + S G V SRP Q F + D +L H I L
Sbjct: 346 KTLLLLGISGTLKDILSGSGLVAGASVSPALSRPAEQMFEIVSLADDLLPHLPSGIISLP 405
Query: 373 AQGH 362
A H
Sbjct: 406 AYFH 409
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,677,570
Number of Sequences: 37544
Number of extensions: 379883
Number of successful extensions: 921
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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