Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11l02
(795 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012116-1|AAH12116.1| 370|Homo sapiens LOC55565 protein protein. 59 2e-08
AF070588-1|AAC28648.1| 370|Homo sapiens unknown protein. 59 2e-08
AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein. 36 0.17
Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein. 34 0.68
U63610-1|AAB05428.1| 4574|Homo sapiens plectin protein. 34 0.68
U53204-1|AAB05427.1| 4574|Homo sapiens plectin protein. 34 0.68
AY480051-1|AAR95684.1| 4547|Homo sapiens plectin 11 protein. 34 0.68
AY480050-1|AAR95683.1| 4551|Homo sapiens plectin 10 protein. 34 0.68
AY480049-1|AAR95682.1| 4547|Homo sapiens plectin 8 protein. 34 0.68
AY480048-1|AAR95681.1| 4515|Homo sapiens plectin 7 protein. 34 0.68
AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein. 34 0.68
AY480046-1|AAR95679.1| 4525|Homo sapiens plectin 3 protein. 34 0.68
AY480045-1|AAR95678.1| 4533|Homo sapiens plectin 2 protein. 34 0.68
AY480044-1|AAR95677.1| 4574|Homo sapiens plectin 1 protein. 34 0.68
L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein. 33 1.2
BC032639-1|AAH32639.1| 1220|Homo sapiens eukaryotic translation ... 33 1.6
AL133563-1|CAB63717.1| 1132|Homo sapiens hypothetical protein pr... 33 1.6
AJ006776-1|CAB44357.1| 1220|Homo sapiens IF2 protein protein. 33 1.6
AF078035-1|AAD16006.1| 1220|Homo sapiens translation initiation ... 33 1.6
AC079447-4|AAX93258.1| 492|Homo sapiens unknown protein. 33 1.6
AB018284-1|BAA34461.2| 1222|Homo sapiens KIAA0741 protein protein. 33 1.6
AL121673-5|CAD37449.1| 225|Homo sapiens BHLHB4 protein. 32 2.1
AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ... 31 4.8
BC098576-1|AAH98576.1| 918|Homo sapiens inner centromere protei... 31 6.3
AY714053-1|AAU04398.1| 918|Homo sapiens inner centromere protei... 31 6.3
AF282265-1|AAF87584.1| 919|Homo sapiens inner centromere protei... 31 6.3
>BC012116-1|AAH12116.1| 370|Homo sapiens LOC55565 protein protein.
Length = 370
Score = 59.3 bits (137), Expect = 2e-08
Identities = 47/117 (40%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Frame = -1
Query: 744 LLEPKARRRRKGS-GPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAK 568
LLE + RK + ++E E R RL + R NE+PE+R R RM + AK
Sbjct: 205 LLEAQTPSVRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVR--RMRDREAK 262
Query: 567 RLS--SETREQRAIRLARMSAYAARRLANETPAQRQARLLR-MSAYAAKRQASKKSL 406
RL ET EQRA RL R + ANETP +RQARL+R A KR+ K +
Sbjct: 263 RLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDM 319
>AF070588-1|AAC28648.1| 370|Homo sapiens unknown protein.
Length = 370
Score = 59.3 bits (137), Expect = 2e-08
Identities = 47/117 (40%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Frame = -1
Query: 744 LLEPKARRRRKGS-GPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAK 568
LLE + RK + ++E E R RL + R NE+PE+R R RM + AK
Sbjct: 205 LLEAQTPSVRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVR--RMRDREAK 262
Query: 567 RLS--SETREQRAIRLARMSAYAARRLANETPAQRQARLLR-MSAYAAKRQASKKSL 406
RL ET EQRA RL R + ANETP +RQARL+R A KR+ K +
Sbjct: 263 RLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDM 319
>AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein.
Length = 1943
Score = 35.9 bits (79), Expect = 0.17
Identities = 30/109 (27%), Positives = 43/109 (39%)
Frame = -1
Query: 738 EPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLS 559
E + + R+ K E E R L + QRL E E+ RLKR E +
Sbjct: 555 EKRLEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLEQRLKR--EEVERLEQ 612
Query: 558 SETREQRAIRLARMSAYAARRLANETPAQRQARLLRMSAYAAKRQASKK 412
E REQR R + L +E +R+ + LR + Q K+
Sbjct: 613 EERREQRLKREEPEEERRQQLLKSEEQEERRQQQLRREQQERREQRLKR 661
Score = 33.1 bits (72), Expect = 1.2
Identities = 31/96 (32%), Positives = 42/96 (43%)
Frame = -1
Query: 738 EPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLS 559
E + RR ++ + +E RL + + Q+L E E+R LKR E KRL
Sbjct: 504 EQQLRREQEERREQRLKRQEEEERL-QQRLRSEQQLRREQEERREQLLKREEE---KRLE 559
Query: 558 SETREQRAIRLARMSAYAARRLANETPAQRQARLLR 451
E REQ RL R +L +RQ RL R
Sbjct: 560 QERREQ---RLKREQEERRDQLLKREEERRQQRLKR 592
Score = 33.1 bits (72), Expect = 1.2
Identities = 28/77 (36%), Positives = 34/77 (44%)
Frame = -1
Query: 639 QRLANESPEQRATRLKRMSEYAAKRLSSETREQRAIRLARMSAYAARRLANETPAQRQAR 460
QRL E E+R LKR E +RL E E+ RL R RL E +R+ R
Sbjct: 565 QRLKREQEERRDQLLKREEERRQQRLKREQEERLEQRLKREE---VERLEQE--ERREQR 619
Query: 459 LLRMSAYAAKRQASKKS 409
L R +RQ KS
Sbjct: 620 LKREEPEEERRQQLLKS 636
>Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein.
Length = 4684
Score = 33.9 bits (74), Expect = 0.68
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Frame = -1
Query: 744 LLEPKARRRRKGSGPKSETSEERAARLAKMSA-----YAAQRLANESPEQRATRLKRMSE 580
LLE + R ++ + ++ +E A LAK+ A A++ A E + + K+ E
Sbjct: 1868 LLEEELARLQREAAAATQKRQELEAELAKVRAEMEVLLASKAKAEEESRSTSEKSKQRLE 1927
Query: 579 YAAKRLSSETREQRAIRLARMSAYAARRLANETPAQRQARLLRMSA 442
A R E +R A R+LA E A+++A R+ A
Sbjct: 1928 AEAGRFRELAEEAARLRALAEEAKRQRQLAEEDAARQRAEAERVLA 1973
>U63610-1|AAB05428.1| 4574|Homo sapiens plectin protein.
Length = 4574
Score = 33.9 bits (74), Expect = 0.68
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Frame = -1
Query: 744 LLEPKARRRRKGSGPKSETSEERAARLAKMSA-----YAAQRLANESPEQRATRLKRMSE 580
LLE + R ++ + ++ +E A LAK+ A A++ A E + + K+ E
Sbjct: 1758 LLEEELARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLE 1817
Query: 579 YAAKRLSSETREQRAIRLARMSAYAARRLANETPAQRQARLLRMSA 442
A R E +R A R+LA E A+++A R+ A
Sbjct: 1818 AEAGRFRELAEEAARLRALAEEAKRQRQLAEEDAARQRAEAERVLA 1863
>U53204-1|AAB05427.1| 4574|Homo sapiens plectin protein.
Length = 4574
Score = 33.9 bits (74), Expect = 0.68
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Frame = -1
Query: 744 LLEPKARRRRKGSGPKSETSEERAARLAKMSA-----YAAQRLANESPEQRATRLKRMSE 580
LLE + R ++ + ++ +E A LAK+ A A++ A E + + K+ E
Sbjct: 1758 LLEEELARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLE 1817
Query: 579 YAAKRLSSETREQRAIRLARMSAYAARRLANETPAQRQARLLRMSA 442
A R E +R A R+LA E A+++A R+ A
Sbjct: 1818 AEAGRFRELAEEAARLRALAEEAKRQRQLAEEDAARQRAEAERVLA 1863
>AY480051-1|AAR95684.1| 4547|Homo sapiens plectin 11 protein.
Length = 4547
Score = 33.9 bits (74), Expect = 0.68
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Frame = -1
Query: 744 LLEPKARRRRKGSGPKSETSEERAARLAKMSA-----YAAQRLANESPEQRATRLKRMSE 580
LLE + R ++ + ++ +E A LAK+ A A++ A E + + K+ E
Sbjct: 1731 LLEEELARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLE 1790
Query: 579 YAAKRLSSETREQRAIRLARMSAYAARRLANETPAQRQARLLRMSA 442
A R E +R A R+LA E A+++A R+ A
Sbjct: 1791 AEAGRFRELAEEAARLRALAEEAKRQRQLAEEDAARQRAEAERVLA 1836
>AY480050-1|AAR95683.1| 4551|Homo sapiens plectin 10 protein.
Length = 4551
Score = 33.9 bits (74), Expect = 0.68
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Frame = -1
Query: 744 LLEPKARRRRKGSGPKSETSEERAARLAKMSA-----YAAQRLANESPEQRATRLKRMSE 580
LLE + R ++ + ++ +E A LAK+ A A++ A E + + K+ E
Sbjct: 1735 LLEEELARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLE 1794
Query: 579 YAAKRLSSETREQRAIRLARMSAYAARRLANETPAQRQARLLRMSA 442
A R E +R A R+LA E A+++A R+ A
Sbjct: 1795 AEAGRFRELAEEAARLRALAEEAKRQRQLAEEDAARQRAEAERVLA 1840
>AY480049-1|AAR95682.1| 4547|Homo sapiens plectin 8 protein.
Length = 4547
Score = 33.9 bits (74), Expect = 0.68
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Frame = -1
Query: 744 LLEPKARRRRKGSGPKSETSEERAARLAKMSA-----YAAQRLANESPEQRATRLKRMSE 580
LLE + R ++ + ++ +E A LAK+ A A++ A E + + K+ E
Sbjct: 1731 LLEEELARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLE 1790
Query: 579 YAAKRLSSETREQRAIRLARMSAYAARRLANETPAQRQARLLRMSA 442
A R E +R A R+LA E A+++A R+ A
Sbjct: 1791 AEAGRFRELAEEAARLRALAEEAKRQRQLAEEDAARQRAEAERVLA 1836
>AY480048-1|AAR95681.1| 4515|Homo sapiens plectin 7 protein.
Length = 4515
Score = 33.9 bits (74), Expect = 0.68
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Frame = -1
Query: 744 LLEPKARRRRKGSGPKSETSEERAARLAKMSA-----YAAQRLANESPEQRATRLKRMSE 580
LLE + R ++ + ++ +E A LAK+ A A++ A E + + K+ E
Sbjct: 1699 LLEEELARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLE 1758
Query: 579 YAAKRLSSETREQRAIRLARMSAYAARRLANETPAQRQARLLRMSA 442
A R E +R A R+LA E A+++A R+ A
Sbjct: 1759 AEAGRFRELAEEAARLRALAEEAKRQRQLAEEDAARQRAEAERVLA 1804
>AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein.
Length = 4684
Score = 33.9 bits (74), Expect = 0.68
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Frame = -1
Query: 744 LLEPKARRRRKGSGPKSETSEERAARLAKMSA-----YAAQRLANESPEQRATRLKRMSE 580
LLE + R ++ + ++ +E A LAK+ A A++ A E + + K+ E
Sbjct: 1868 LLEEELARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLE 1927
Query: 579 YAAKRLSSETREQRAIRLARMSAYAARRLANETPAQRQARLLRMSA 442
A R E +R A R+LA E A+++A R+ A
Sbjct: 1928 AEAGRFRELAEEAARLRALAEEAKRQRQLAEEDAARQRAEAERVLA 1973
>AY480046-1|AAR95679.1| 4525|Homo sapiens plectin 3 protein.
Length = 4525
Score = 33.9 bits (74), Expect = 0.68
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Frame = -1
Query: 744 LLEPKARRRRKGSGPKSETSEERAARLAKMSA-----YAAQRLANESPEQRATRLKRMSE 580
LLE + R ++ + ++ +E A LAK+ A A++ A E + + K+ E
Sbjct: 1709 LLEEELARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLE 1768
Query: 579 YAAKRLSSETREQRAIRLARMSAYAARRLANETPAQRQARLLRMSA 442
A R E +R A R+LA E A+++A R+ A
Sbjct: 1769 AEAGRFRELAEEAARLRALAEEAKRQRQLAEEDAARQRAEAERVLA 1814
>AY480045-1|AAR95678.1| 4533|Homo sapiens plectin 2 protein.
Length = 4533
Score = 33.9 bits (74), Expect = 0.68
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Frame = -1
Query: 744 LLEPKARRRRKGSGPKSETSEERAARLAKMSA-----YAAQRLANESPEQRATRLKRMSE 580
LLE + R ++ + ++ +E A LAK+ A A++ A E + + K+ E
Sbjct: 1717 LLEEELARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLE 1776
Query: 579 YAAKRLSSETREQRAIRLARMSAYAARRLANETPAQRQARLLRMSA 442
A R E +R A R+LA E A+++A R+ A
Sbjct: 1777 AEAGRFRELAEEAARLRALAEEAKRQRQLAEEDAARQRAEAERVLA 1822
>AY480044-1|AAR95677.1| 4574|Homo sapiens plectin 1 protein.
Length = 4574
Score = 33.9 bits (74), Expect = 0.68
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Frame = -1
Query: 744 LLEPKARRRRKGSGPKSETSEERAARLAKMSA-----YAAQRLANESPEQRATRLKRMSE 580
LLE + R ++ + ++ +E A LAK+ A A++ A E + + K+ E
Sbjct: 1758 LLEEELARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLE 1817
Query: 579 YAAKRLSSETREQRAIRLARMSAYAARRLANETPAQRQARLLRMSA 442
A R E +R A R+LA E A+++A R+ A
Sbjct: 1818 AEAGRFRELAEEAARLRALAEEAKRQRQLAEEDAARQRAEAERVLA 1863
>L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein.
Length = 1898
Score = 33.1 bits (72), Expect = 1.2
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 3/112 (2%)
Frame = -1
Query: 738 EPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLS 559
E + + R+ K E E R L + QRL E E+ RLKR +RL
Sbjct: 574 EKRLEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLEQRLKREE---VERLE 630
Query: 558 SETREQRAIRLARMSAYAARR---LANETPAQRQARLLRMSAYAAKRQASKK 412
E E+R RL R RR L +E +R+ LR + Q K+
Sbjct: 631 QE--ERRDERLKREEPEEERRHELLKSEEQEERRHEQLRREQQERREQRLKR 680
Score = 30.3 bits (65), Expect = 8.4
Identities = 27/77 (35%), Positives = 32/77 (41%)
Frame = -1
Query: 639 QRLANESPEQRATRLKRMSEYAAKRLSSETREQRAIRLARMSAYAARRLANETPAQRQAR 460
QRL E E+R LKR E +RL E E+ RL R RL E +R R
Sbjct: 584 QRLKREQEERRDQLLKREEERRQQRLKREQEERLEQRLKREE---VERLEQE--ERRDER 638
Query: 459 LLRMSAYAAKRQASKKS 409
L R +R KS
Sbjct: 639 LKREEPEEERRHELLKS 655
>BC032639-1|AAH32639.1| 1220|Homo sapiens eukaryotic translation
initiation factor 5B protein.
Length = 1220
Score = 32.7 bits (71), Expect = 1.6
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Frame = -1
Query: 732 KARRRRKGSGPKSETSEERAARLAKMSAY--AAQRLANESPEQR---ATRLKRMSEYAAK 568
K ++++KG + E +++ A + A A +L E Q+ R+KR+ E AK
Sbjct: 316 KDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEELEAK 375
Query: 567 RLSSETREQ-RAIRLARMSAYAARRLANE----TPAQRQAR 460
R E EQ + R + RL E T +QR+AR
Sbjct: 376 RKEEERLEQEKRERKKQKEKERKERLKKEGKLLTKSQREAR 416
>AL133563-1|CAB63717.1| 1132|Homo sapiens hypothetical protein
protein.
Length = 1132
Score = 32.7 bits (71), Expect = 1.6
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Frame = -1
Query: 732 KARRRRKGSGPKSETSEERAARLAKMSAY--AAQRLANESPEQR---ATRLKRMSEYAAK 568
K ++++KG + E +++ A + A A +L E Q+ R+KR+ E AK
Sbjct: 228 KDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEELEAK 287
Query: 567 RLSSETREQ-RAIRLARMSAYAARRLANE----TPAQRQAR 460
R E EQ + R + RL E T +QR+AR
Sbjct: 288 RKEEERLEQEKRERKKQKEKERKERLKKEGKLLTKSQREAR 328
>AJ006776-1|CAB44357.1| 1220|Homo sapiens IF2 protein protein.
Length = 1220
Score = 32.7 bits (71), Expect = 1.6
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Frame = -1
Query: 732 KARRRRKGSGPKSETSEERAARLAKMSAY--AAQRLANESPEQR---ATRLKRMSEYAAK 568
K ++++KG + E +++ A + A A +L E Q+ R+KR+ E AK
Sbjct: 316 KDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEELEAK 375
Query: 567 RLSSETREQ-RAIRLARMSAYAARRLANE----TPAQRQAR 460
R E EQ + R + RL E T +QR+AR
Sbjct: 376 RKEEERLEQEKRERKKQKEKERKERLKKEGKLLTKSQREAR 416
>AF078035-1|AAD16006.1| 1220|Homo sapiens translation initiation
factor IF2 protein.
Length = 1220
Score = 32.7 bits (71), Expect = 1.6
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Frame = -1
Query: 732 KARRRRKGSGPKSETSEERAARLAKMSAY--AAQRLANESPEQR---ATRLKRMSEYAAK 568
K ++++KG + E +++ A + A A +L E Q+ R+KR+ E AK
Sbjct: 316 KDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEELEAK 375
Query: 567 RLSSETREQ-RAIRLARMSAYAARRLANE----TPAQRQAR 460
R E EQ + R + RL E T +QR+AR
Sbjct: 376 RKEEERLEQEKRERKKQKEKERKERLKKEGKLLTKSQREAR 416
>AC079447-4|AAX93258.1| 492|Homo sapiens unknown protein.
Length = 492
Score = 32.7 bits (71), Expect = 1.6
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Frame = -1
Query: 732 KARRRRKGSGPKSETSEERAARLAKMSAY--AAQRLANESPEQR---ATRLKRMSEYAAK 568
K ++++KG + E +++ A + A A +L E Q+ R+KR+ E AK
Sbjct: 316 KDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEELEAK 375
Query: 567 RLSSETREQ-RAIRLARMSAYAARRLANE----TPAQRQAR 460
R E EQ + R + RL E T +QR+AR
Sbjct: 376 RKEEERLEQEKRERKKQKEKERKERLKKEGKLLTKSQREAR 416
>AB018284-1|BAA34461.2| 1222|Homo sapiens KIAA0741 protein protein.
Length = 1222
Score = 32.7 bits (71), Expect = 1.6
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Frame = -1
Query: 732 KARRRRKGSGPKSETSEERAARLAKMSAY--AAQRLANESPEQR---ATRLKRMSEYAAK 568
K ++++KG + E +++ A + A A +L E Q+ R+KR+ E AK
Sbjct: 318 KDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEELEAK 377
Query: 567 RLSSETREQ-RAIRLARMSAYAARRLANE----TPAQRQAR 460
R E EQ + R + RL E T +QR+AR
Sbjct: 378 RKEEERLEQEKRERKKQKEKERKERLKKEGKLLTKSQREAR 418
>AL121673-5|CAD37449.1| 225|Homo sapiens BHLHB4 protein.
Length = 225
Score = 32.3 bits (70), Expect = 2.1
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
Frame = -1
Query: 738 EPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLS 559
EP+A R GP + A R +A ++ + + + R +R +A
Sbjct: 33 EPEAARGYGTPGPGGDLPAAPAPRAPAQAAESSGEQSGDEDDAFEQRRRRRGPGSAADGR 92
Query: 558 SETREQRAIRLARMSAYAARRLANETPAQRQARLLRMSAYA-AKRQASKKSLSTVNDSLN 382
REQR++RL+ ++A RR+ + A R + A++ + R+ SK ++T+ + N
Sbjct: 93 RRPREQRSLRLS-INARERRRMHDLNDALDGLRAVIPYAHSPSVRKLSK--IATLLLAKN 149
Query: 381 YSIMPNQSRATNHPFT*ILFLN 316
Y +M Q++A + + FLN
Sbjct: 150 YILM--QAQALDEMRRLVAFLN 169
>AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4
protein.
Length = 1362
Score = 31.1 bits (67), Expect = 4.8
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 13/124 (10%)
Frame = -1
Query: 765 QEMDPLSLLEPKARRRRKGSGP------KSETSEERAARLAKMSAYAAQRLANESPEQRA 604
Q+ +P + + PK + K G K T+ A+ + S +R A E E+R
Sbjct: 1180 QKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSSTAKSSSDSFEQFRRAAREK-EERE 1238
Query: 603 TRLKRMSEYAAK---RLSSETREQR----AIRLARMSAYAARRLANETPAQRQARLLRMS 445
LK +E+A K RL E R A+ AR + ARR + QRQ + +
Sbjct: 1239 KALKAQAEHAEKEKERLRQERMRSREDEDALEQARRAHEEARRRQEQQQQQRQEQQQQQQ 1298
Query: 444 AYAA 433
AA
Sbjct: 1299 QQAA 1302
>BC098576-1|AAH98576.1| 918|Homo sapiens inner centromere protein
antigens 135/155kDa protein.
Length = 918
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/89 (22%), Positives = 38/89 (42%)
Frame = -1
Query: 693 ETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLSSETREQRAIRLARMS 514
E +E A R+ L ++P Q+ R KR Y R + + R +R S
Sbjct: 35 EEIQEEAERMFTREFSKEPELMPKTPSQKNRRKKRRISYVQDENRDPIRRRLSRRKSRSS 94
Query: 513 AYAARRLANETPAQRQARLLRMSAYAAKR 427
++RRL ++ ++ A ++ + +R
Sbjct: 95 QLSSRRLRSKDSVEKLATVVGENGSVLRR 123
Score = 30.7 bits (66), Expect = 6.3
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Frame = -1
Query: 738 EPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLS 559
E + RR ++ K E +ER + A+ A+RLA + ++R + +R E R
Sbjct: 654 EEEERRHQELLQKKKEEEQERLRKAAE-----AKRLAEQREQERREQERREQE----RRE 704
Query: 558 SETREQRAIRLARMSAYAAR-----RLANETPAQRQARLLRMSAYAAKRQASKK 412
E REQ R A R RL E Q + + LR+ +R+ +K
Sbjct: 705 QERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEK 758
>AY714053-1|AAU04398.1| 918|Homo sapiens inner centromere protein
protein.
Length = 918
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/89 (22%), Positives = 38/89 (42%)
Frame = -1
Query: 693 ETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLSSETREQRAIRLARMS 514
E +E A R+ L ++P Q+ R KR Y R + + R +R S
Sbjct: 35 EEIQEEAERMFTREFSKEPELMPKTPSQKNRRKKRRISYVQDENRDPIRRRLSRRKSRSS 94
Query: 513 AYAARRLANETPAQRQARLLRMSAYAAKR 427
++RRL ++ ++ A ++ + +R
Sbjct: 95 QLSSRRLRSKDSVEKLATVVGENGSVLRR 123
Score = 30.7 bits (66), Expect = 6.3
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Frame = -1
Query: 738 EPKARRRRKGSGPKSETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLS 559
E + RR ++ K E +ER + A+ A+RLA + ++R + +R E R
Sbjct: 654 EEEERRHQELLQKKKEEEQERLRKAAE-----AKRLAEQREQERREQERREQE----RRE 704
Query: 558 SETREQRAIRLARMSAYAAR-----RLANETPAQRQARLLRMSAYAAKRQASKK 412
E REQ R A R RL E Q + + LR+ +R+ +K
Sbjct: 705 QERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEK 758
>AF282265-1|AAF87584.1| 919|Homo sapiens inner centromere protein
INCENP protein.
Length = 919
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/89 (22%), Positives = 38/89 (42%)
Frame = -1
Query: 693 ETSEERAARLAKMSAYAAQRLANESPEQRATRLKRMSEYAAKRLSSETREQRAIRLARMS 514
E +E A R+ L ++P Q+ R KR Y R + + R +R S
Sbjct: 35 EEIQEEAERMFTREFSKEPELMPKTPSQKNRRKKRRISYVQDENRDPIRRRLSRRKSRSS 94
Query: 513 AYAARRLANETPAQRQARLLRMSAYAAKR 427
++RRL ++ ++ A ++ + +R
Sbjct: 95 QLSSRRLRSKDSVEKLATVVGENGSVLRR 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,479,441
Number of Sequences: 237096
Number of extensions: 1763528
Number of successful extensions: 3858
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3839
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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