Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11k18
(795 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0359 + 22508900-22509439 233 9e-62
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 219 2e-57
02_01_0160 + 1116160-1116678 217 1e-56
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 204 5e-53
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 188 4e-48
10_01_0309 + 3417602-3418147 183 2e-46
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 179 2e-45
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 167 7e-42
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 164 6e-41
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 132 1e-37
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 142 2e-34
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 132 2e-31
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 129 3e-30
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 124 8e-29
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 121 8e-28
06_01_0214 + 1634171-1634173,1634263-1634742 120 1e-27
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 95 4e-20
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 85 8e-17
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 70 2e-12
02_01_0086 + 613113-613532 66 4e-11
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 64 9e-11
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 53 5e-10
03_05_0235 - 22214700-22214914,22218782-22219045,22219258-22219294 56 3e-08
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 46 5e-05
08_02_0053 + 11721658-11721689,11721960-11722710 44 1e-04
01_01_0077 - 585670-585787,585921-586687 41 0.001
10_01_0310 + 3425099-3425218 32 0.46
01_01_0510 - 3723983-3724416,3724895-3725766,3725797-3726791,372... 30 2.4
05_07_0290 + 29016410-29018920 29 4.3
01_03_0010 - 11608537-11608786,11608816-11608940,11609152-116092... 28 7.4
02_05_0593 - 30217432-30218232 28 9.8
>09_06_0359 + 22508900-22509439
Length = 179
Score = 233 bits (571), Expect = 9e-62
Identities = 106/162 (65%), Positives = 127/162 (78%), Gaps = 7/162 (4%)
Frame = -3
Query: 466 RNPQVYFDISVNKQEIGRIIMMLRADIVPKTAENFRSLCTHEKGFG-------YQGSSFH 308
+NP+V+FDI + K GR++M L AD VPKTAENFR LCT EKG G Y+GS+FH
Sbjct: 4 KNPKVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFH 63
Query: 307 RIIPEFMCQGGDFTNHNGTGGKSIYGRKFEDENFALKHTGPGVLSMANSGPNSNGSQFFL 128
RIIP FMCQGGDFT NGTGG+SIYG +F DENF L+HTGPGVLSMAN+GPN+NGSQFF+
Sbjct: 64 RIIPNFMCQGGDFTRGNGTGGESIYGDRFADENFKLRHTGPGVLSMANAGPNTNGSQFFI 123
Query: 127 CTAKTEWLDGKHVVFGHVISGLDVMKKMERYGSKSGTVSAKV 2
CT +T WLDGKHVVFG V+ G V++KME+ GS SG + +V
Sbjct: 124 CTTRTTWLDGKHVVFGKVVDGYTVVEKMEQVGSGSGGTAERV 165
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 219 bits (536), Expect = 2e-57
Identities = 97/149 (65%), Positives = 120/149 (80%), Gaps = 3/149 (2%)
Frame = -3
Query: 457 QVYFDISVNK---QEIGRIIMMLRADIVPKTAENFRSLCTHEKGFGYQGSSFHRIIPEFM 287
+VYFDIS+ + +GR+++ L D VP+TAENFR+LCT EKGFGY+GSSFHR+I +FM
Sbjct: 84 KVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCTGEKGFGYKGSSFHRVIKDFM 143
Query: 286 CQGGDFTNHNGTGGKSIYGRKFEDENFALKHTGPGVLSMANSGPNSNGSQFFLCTAKTEW 107
QGGDF NGTGGKSIYGR F+DENF L HTGPGV+SMAN+GPN+NGSQFF+CT KT W
Sbjct: 144 IQGGDFDKGNGTGGKSIYGRTFKDENFKLVHTGPGVVSMANAGPNTNGSQFFICTVKTPW 203
Query: 106 LDGKHVVFGHVISGLDVMKKMERYGSKSG 20
LDG+HVVFG VI G+D++K +E + G
Sbjct: 204 LDGRHVVFGQVIEGMDIVKMIESQETDRG 232
>02_01_0160 + 1116160-1116678
Length = 172
Score = 217 bits (529), Expect = 1e-56
Identities = 98/161 (60%), Positives = 121/161 (75%), Gaps = 7/161 (4%)
Frame = -3
Query: 463 NPQVYFDISVNKQEIGRIIMMLRADIVPKTAENFRSLCTHEKGFG-------YQGSSFHR 305
N +V+FD++V GRI+M L A VP+TAENFR+LCT EKG G Y+GS+FHR
Sbjct: 3 NTRVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHR 62
Query: 304 IIPEFMCQGGDFTNHNGTGGKSIYGRKFEDENFALKHTGPGVLSMANSGPNSNGSQFFLC 125
+IPEFMCQGGDFT NGTGG+SIYG KF DE F KH PG+LSMAN+GPN+NGSQFF+C
Sbjct: 63 VIPEFMCQGGDFTRGNGTGGESIYGEKFADEVFKFKHDSPGILSMANAGPNTNGSQFFIC 122
Query: 124 TAKTEWLDGKHVVFGHVISGLDVMKKMERYGSKSGTVSAKV 2
T WLDGKHVVFG V+ G+DV+K +E+ GS+ G+ + V
Sbjct: 123 TVPCSWLDGKHVVFGRVVEGMDVVKAIEKVGSRGGSTAKPV 163
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 204 bits (499), Expect = 5e-53
Identities = 95/159 (59%), Positives = 121/159 (76%), Gaps = 7/159 (4%)
Frame = -3
Query: 457 QVYFDISVNKQEIGRIIMMLRADIVPKTAENFRSLCTHEKGFG-------YQGSSFHRII 299
+VYFD+ ++ + GR++M L VPKTAENFR+LCT EKG G ++GS+FHRII
Sbjct: 52 KVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGTGKSGKALHFKGSAFHRII 111
Query: 298 PEFMCQGGDFTNHNGTGGKSIYGRKFEDENFALKHTGPGVLSMANSGPNSNGSQFFLCTA 119
P FM QGGDFT +G GG+SIYG KF DENF +KHTGPG+LSMAN+G ++NGSQFF+ T
Sbjct: 112 PSFMIQGGDFTLGDGRGGESIYGTKFADENFKIKHTGPGLLSMANAGRDTNGSQFFITTV 171
Query: 118 KTEWLDGKHVVFGHVISGLDVMKKMERYGSKSGTVSAKV 2
T WLDGKHVVFG V+SG+DV+ K+E G +SG+ +KV
Sbjct: 172 TTSWLDGKHVVFGKVLSGMDVVYKIEAEGQQSGSPKSKV 210
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 188 bits (458), Expect = 4e-48
Identities = 93/172 (54%), Positives = 119/172 (69%), Gaps = 7/172 (4%)
Frame = -3
Query: 496 SVTPSKPIEKRNPQVYFDISVNKQEIGRIIMMLRADIVPKTAENFRSLCTHEKGFG---- 329
+V + K +V+FDI++N + GRI+M L + VPKTAENFR++CT EKG G
Sbjct: 28 AVESEAELTKVTTKVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGK 87
Query: 328 ---YQGSSFHRIIPEFMCQGGDFTNHNGTGGKSIYGRKFEDENFALKHTGPGVLSMANSG 158
Y+G+ FHRIIP FM QGGD + NGTG SIYG F DENF + H+ PG+LSMAN
Sbjct: 88 PLSYKGTPFHRIIPGFMIQGGDTVSGNGTGCDSIYGGMFPDENFKINHSAPGLLSMANYA 147
Query: 157 PNSNGSQFFLCTAKTEWLDGKHVVFGHVISGLDVMKKMERYGSKSGTVSAKV 2
++NGSQFF+ T K LDGKHVVFG V+SG+DV+ K+E GS+SGT +KV
Sbjct: 148 KDTNGSQFFITTVKLTRLDGKHVVFGKVLSGMDVVYKIEAEGSQSGTPRSKV 199
>10_01_0309 + 3417602-3418147
Length = 181
Score = 183 bits (445), Expect = 2e-46
Identities = 84/160 (52%), Positives = 113/160 (70%), Gaps = 10/160 (6%)
Frame = -3
Query: 469 KRNPQVYFDISVNKQEIGRIIMMLRADIVPKTAENFRSLCTHEKG-------FGYQGSSF 311
K NP+V+ DI++ + +GR+++ L AD VP TAENFR LCT E+ Y+GS+F
Sbjct: 8 KSNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAF 67
Query: 310 HRIIPEFMCQGGDFTNHNGTGGKSIY---GRKFEDENFALKHTGPGVLSMANSGPNSNGS 140
HR++P FMCQGGD T NGTGG+S R F DE FA+KH GPGV+SMAN+GPN+NGS
Sbjct: 68 HRVVPGFMCQGGDITAGNGTGGESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNTNGS 127
Query: 139 QFFLCTAKTEWLDGKHVVFGHVISGLDVMKKMERYGSKSG 20
QFF+ K WLDG+HV FG V++G+ ++ ++R G+ SG
Sbjct: 128 QFFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSG 167
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 179 bits (436), Expect = 2e-45
Identities = 76/118 (64%), Positives = 97/118 (82%)
Frame = -3
Query: 469 KRNPQVYFDISVNKQEIGRIIMMLRADIVPKTAENFRSLCTHEKGFGYQGSSFHRIIPEF 290
K N + +FD+ V + GRI++ L ++VPKT +NFR+LCT +KG+GY+G SFHRII +F
Sbjct: 63 KVNSKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRIIKDF 122
Query: 289 MCQGGDFTNHNGTGGKSIYGRKFEDENFALKHTGPGVLSMANSGPNSNGSQFFLCTAK 116
M QGGDF N+NGTGG+SIYG F+DENF LKHTGPGVLSMAN+GP++NGSQFF+CT K
Sbjct: 123 MIQGGDFQNNNGTGGRSIYGECFDDENFTLKHTGPGVLSMANAGPDTNGSQFFICTVK 180
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 167 bits (407), Expect = 7e-42
Identities = 80/152 (52%), Positives = 106/152 (69%), Gaps = 8/152 (5%)
Frame = -3
Query: 472 EKRNPQVYFDISVNKQEIGRIIMMLRADIVPKTAENFRSLCTHEKGFG--------YQGS 317
+K+NP V+ D+S+ + R++ L AD+ P+TAENFR+LCT E G G Y+GS
Sbjct: 3 KKKNPIVFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGS 62
Query: 316 SFHRIIPEFMCQGGDFTNHNGTGGKSIYGRKFEDENFALKHTGPGVLSMANSGPNSNGSQ 137
FHR+I FM QGGDF+N +G+GG+SIYG FEDENF L+H G+LSMAN+GPN+NGSQ
Sbjct: 63 LFHRVIKGFMAQGGDFSNGDGSGGESIYGGTFEDENFVLRHDERGLLSMANAGPNTNGSQ 122
Query: 136 FFLCTAKTEWLDGKHVVFGHVISGLDVMKKME 41
FF+ LD K VFG +I G DV+K++E
Sbjct: 123 FFITFKHNSRLDRKSTVFGKLILGNDVLKRIE 154
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 164 bits (399), Expect = 6e-41
Identities = 84/164 (51%), Positives = 105/164 (64%), Gaps = 22/164 (13%)
Frame = -3
Query: 466 RNPQVYFDISVNKQEIGRIIMMLRADIVPKTAENFRSLCTHEKGFGY------------- 326
RNP+ Y D+S+ GRI++ L A + P+TAENFR+LCT EKG
Sbjct: 31 RNPRCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKISLK 90
Query: 325 ---------QGSSFHRIIPEFMCQGGDFTNHNGTGGKSIYGRKFEDENFALKHTGPGVLS 173
+GS HRI+ FM QGGD T +GTGG+SIYG FEDENF LKH G+LS
Sbjct: 91 AASVCTRWTKGSCIHRIVKGFMVQGGDITAGDGTGGESIYGLNFEDENFVLKHERKGMLS 150
Query: 172 MANSGPNSNGSQFFLCTAKTEWLDGKHVVFGHVISGLDVMKKME 41
MAN+GP++NGSQFF+ T +T LDGKHVVFG VI G+ V++ ME
Sbjct: 151 MANAGPDTNGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSME 194
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 132 bits (318), Expect(2) = 1e-37
Identities = 73/141 (51%), Positives = 86/141 (60%), Gaps = 24/141 (17%)
Frame = -3
Query: 481 KPIEKRNPQVYFDISVNKQEIGRIIMMLRADIVPKTAENFRSLCT--HEKGF---GYQGS 317
+P +NP V+FD+++ GRI M L ADIVPKTAENFR CT H K GY+G
Sbjct: 30 RPPNPKNPVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGC 89
Query: 316 SFHRIIPEFMCQGGDFTNHNGTGGKSIYGRKFEDENFALKHTGPGVLSM----------- 170
FHR+I +FM QGGD+ +GTG SIYG KF+DENF KHTGPG+LSM
Sbjct: 90 QFHRVIKDFMIQGGDYMKGDGTGCTSIYGTKFDDENFIAKHTGPGLLSMVRSYYIYIKLE 149
Query: 169 --------ANSGPNSNGSQFF 131
ANSG NSNGSQ F
Sbjct: 150 QDIEASSKANSGVNSNGSQIF 170
Score = 43.2 bits (97), Expect(2) = 1e-37
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = -3
Query: 139 QFFLCTAKTEWLDGKHVVFGHVI-SGLDVMKKME 41
QFF+ AK EWLD KHVVFG V+ G+ ++K+E
Sbjct: 200 QFFITCAKCEWLDNKHVVFGRVLGDGMLAVRKIE 233
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 142 bits (345), Expect = 2e-34
Identities = 66/100 (66%), Positives = 77/100 (77%)
Frame = -3
Query: 340 KGFGYQGSSFHRIIPEFMCQGGDFTNHNGTGGKSIYGRKFEDENFALKHTGPGVLSMANS 161
K F QGS FHR+I FM QGGD T +GTGG+SIYG KFEDENF LKH G+LSMANS
Sbjct: 113 KIFHVQGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKGMLSMANS 172
Query: 160 GPNSNGSQFFLCTAKTEWLDGKHVVFGHVISGLDVMKKME 41
GPN+NGSQFF+ T +T LDGKHVVFG VI G+ V++ +E
Sbjct: 173 GPNTNGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSVE 212
Score = 61.7 bits (143), Expect = 7e-10
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = -3
Query: 475 IEKRNPQVYFDISVNKQEIGRIIMMLRADIVPKTAENFRSLCTHEKGFG-YQGSSFHRII 299
+E +NP+ + D+S+ + GRI++ L A +VP+TAENFR+LCT EKG G G H
Sbjct: 21 VEVKNPRCFMDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGVGAVTGKHLH--Y 78
Query: 298 PEFMCQGGDFTN-HNGTGGKSI 236
+F DF N H+ T G+ +
Sbjct: 79 KDF---DADFINMHSETFGRLV 97
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 132 bits (320), Expect = 2e-31
Identities = 74/160 (46%), Positives = 96/160 (60%), Gaps = 8/160 (5%)
Frame = -3
Query: 457 QVYFDISVNKQEIGRIIMMLRADIVPKTAENFRSLCTHEKGFG-------YQGSSFHRII 299
+VY D+ ++ Q IGRI++ L D+VPKT NFR+LCT E+G G Y+GS FHRII
Sbjct: 39 RVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRII 98
Query: 298 PEFMCQGGDFTNHNGTGGKSIYGRKFEDENFALKHTGPGVLSMANSGPNSNGSQFFLCTA 119
P FM QGGD +G G V++MANSGP+SNGSQF++ T
Sbjct: 99 PGFMIQGGDIVRGDGKG---------------------SVIAMANSGPDSNGSQFYITTI 137
Query: 118 KTEWLDGKHVVFGHVISGLDVMKKME-RYGSKSGTVSAKV 2
KT WLDG+HVVFG VI G+D + +E G+ +G KV
Sbjct: 138 KTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKKV 177
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 129 bits (311), Expect = 3e-30
Identities = 67/137 (48%), Positives = 91/137 (66%), Gaps = 1/137 (0%)
Frame = -3
Query: 445 DISVNKQEIGRIIMMLRADIVPKTAENFRSLCTHEKGFGYQGSSFHRIIPEFMCQGGDFT 266
D V +G I + L + PKT ENF + C + G+ Y FHR+I FM Q GD
Sbjct: 496 DNLVMHTSMGDIHLRLYPEECPKTVENFTTHCRN--GY-YDNLIFHRVIKGFMIQTGDPL 552
Query: 265 NHNGTGGKSIYGRKFEDE-NFALKHTGPGVLSMANSGPNSNGSQFFLCTAKTEWLDGKHV 89
+GTGG+SI+GR+FEDE + +L+H P LSMAN+GPN+NGSQFF+ T T WLD KH
Sbjct: 553 G-DGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHT 611
Query: 88 VFGHVISGLDVMKKMER 38
VFG V+ G+DV++++E+
Sbjct: 612 VFGRVVKGMDVVQQIEK 628
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 124 bits (299), Expect = 8e-29
Identities = 62/114 (54%), Positives = 79/114 (69%), Gaps = 1/114 (0%)
Frame = -3
Query: 382 PKTAENFRSLCTHEKGFGYQGSSFHRIIPEFMCQGGDFTNHNGTGGKSIYGRKFEDE-NF 206
PKT NF L +G+ Y FHRII +F+ QGGD T G GG+SIYG KFEDE
Sbjct: 31 PKTCRNFLELS--RRGY-YDNVIFHRIIKDFIVQGGDPTG-TGRGGESIYGAKFEDEIRP 86
Query: 205 ALKHTGPGVLSMANSGPNSNGSQFFLCTAKTEWLDGKHVVFGHVISGLDVMKKM 44
LKHTG G+LSMAN+GPN+NGSQFF+ A + LDGKH +FG V G++++K++
Sbjct: 87 ELKHTGAGILSMANAGPNTNGSQFFITLAPCQSLDGKHTIFGRVSKGMEIVKRL 140
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 121 bits (291), Expect = 8e-28
Identities = 64/128 (50%), Positives = 83/128 (64%), Gaps = 1/128 (0%)
Frame = -3
Query: 418 GRIIMMLRADIVPKTAENFRSLCTHEKGFGYQGSSFHRIIPEFMCQGGDFTNHNGTGGKS 239
G + + L DI P+T ENF + C E G+ Y G FHR I FM QGGD T G+GG+S
Sbjct: 354 GDLNLELHCDITPRTCENFLTHC--ENGY-YNGLIFHRSIKNFMIQGGDPTG-TGSGGES 409
Query: 238 IYGRKFEDE-NFALKHTGPGVLSMANSGPNSNGSQFFLCTAKTEWLDGKHVVFGHVISGL 62
I+G+ F+DE N L H+G GV+SMANSGP++NGSQFF+ L+ KH VFG V+ GL
Sbjct: 410 IWGKPFKDELNSKLIHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFGMVVGGL 469
Query: 61 DVMKKMER 38
+ ME+
Sbjct: 470 TTLSAMEK 477
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 120 bits (289), Expect = 1e-27
Identities = 66/129 (51%), Positives = 83/129 (64%), Gaps = 1/129 (0%)
Frame = -3
Query: 421 IGRIIMMLRADIVPKTAENFRSLCTHEKGFGYQGSSFHRIIPEFMCQGGDFTNHNGTGGK 242
+G I + D P+TAENF +LC G+ Y G+ FHR I FM QGGD T G GG
Sbjct: 9 LGDIKCEVFCDQAPRTAENFLALCA--SGY-YDGTIFHRNIKGFMIQGGDPTG-TGKGGT 64
Query: 241 SIYGRKFEDE-NFALKHTGPGVLSMANSGPNSNGSQFFLCTAKTEWLDGKHVVFGHVISG 65
SI+G+KF DE +LKH GV+SMANSGPN+NGSQFF+ AK L+G + VF VI G
Sbjct: 65 SIWGKKFADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAKQPHLNGHYTVFAKVIHG 124
Query: 64 LDVMKKMER 38
+V+ ME+
Sbjct: 125 FEVLDLMEK 133
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 95.5 bits (227), Expect = 4e-20
Identities = 50/105 (47%), Positives = 69/105 (65%), Gaps = 2/105 (1%)
Frame = -3
Query: 382 PKTAENFRSLCTHEKGFGYQGSSFHRIIPEFMCQGGDFTNHNGTGGKSIYGRKFEDE-NF 206
PK NF LC +G+ Y G+ FHR+I F+ QGGD T +GTGG+SIYG F DE +
Sbjct: 34 PKAVRNFVQLCL--EGY-YDGTLFHRVIKSFLVQGGDPTG-SGTGGESIYGAPFADEFHT 89
Query: 205 ALKHTGPGVLSMANSG-PNSNGSQFFLCTAKTEWLDGKHVVFGHV 74
L+ G+++ AN+G P+SNGSQFF+ + +WLD K+ +FG V
Sbjct: 90 RLRFNHRGLVACANAGTPHSNGSQFFISLDRCDWLDKKNTIFGKV 134
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 84.6 bits (200), Expect = 8e-17
Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Frame = -3
Query: 421 IGRIIMMLRADIVPKTAENFRSLCTHEKGFGYQGSSFHRIIPEFMCQGGDFTNHNGTGGK 242
+G I + L D+ P T +NF LC + Y G FH++ +F+ Q GD T G GG
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLCKMKY---YNGCLFHKVEKDFLAQTGDPTG-TGAGGD 64
Query: 241 SIY-------GRKFEDE-NFALKHTGPGVLSMANSGPNSNGSQFFLCTA-KTEWLDGKHV 89
S+Y R F+DE L+H+ G ++MA++G N N SQF++ ++LD KH
Sbjct: 65 SVYKFLYGDQARFFDDEIRPDLRHSKKGTIAMASAGENCNASQFYITLRDDVDYLDDKHT 124
Query: 88 VFGHVISGLDVMKKM-ERYGSKSG 20
VFG V G D + K+ E Y G
Sbjct: 125 VFGMVAEGFDTLTKISETYVDDKG 148
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 8/74 (10%)
Frame = -3
Query: 478 PIEKRNPQVYFDISVNKQEIGRIIMMLRADIVPKTAENFRSLCTHEKGFG--------YQ 323
P K+NP V+FDI++ + RI L AD+VPKT ENFR+LCT E+G G ++
Sbjct: 2 PKAKKNPHVFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLGVSTQKPLYFK 61
Query: 322 GSSFHRIIPEFMCQ 281
G++ HRI+ FM Q
Sbjct: 62 GTNMHRILKGFMAQ 75
Score = 37.9 bits (84), Expect = 0.009
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = -3
Query: 97 KHVVFGHVISGLDVMKKMERYGSKSGTVSAKV 2
KHVVFG V++G+ ++KK+E GS +G + +V
Sbjct: 94 KHVVFGKVVTGMPLLKKLEAVGSDTGKPTCEV 125
>02_01_0086 + 613113-613532
Length = 139
Score = 65.7 bits (153), Expect = 4e-11
Identities = 44/122 (36%), Positives = 59/122 (48%)
Frame = -3
Query: 406 MMLRADIVPKTAENFRSLCTHEKGFGYQGSSFHRIIPEFMCQGGDFTNHNGTGGKSIYGR 227
M L AD+VP TAENFR+L T +K Y+G + P +G + R
Sbjct: 1 MELYADLVPLTAENFRALYT-KKPLHYKGLCLSQHYPRIHVEGRRLRQGPWHRRRVHLRR 59
Query: 226 KFEDENFALKHTGPGVLSMANSGPNSNGSQFFLCTAKTEWLDGKHVVFGHVISGLDVMKK 47
+ENF L H P + N +N SQFF + W DG +VVFG +ISG +K
Sbjct: 60 HLPNENFLLPHDRPW---LPNGSAENNISQFF---TRVPWFDGNYVVFGCIISGFHNLKA 113
Query: 46 ME 41
+E
Sbjct: 114 IE 115
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 64.5 bits (150), Expect = 9e-11
Identities = 42/126 (33%), Positives = 61/126 (48%)
Frame = -3
Query: 418 GRIIMMLRADIVPKTAENFRSLCTHEKGFGYQGSSFHRIIPEFMCQGGDFTNHNGTGGKS 239
G I + + D + F SLC K ++G F +I F+ QGGDF + NG +
Sbjct: 103 GSITIEIYKDASADVVDRFVSLC---KSNHFKGMPFRHVIKNFVIQGGDF-DFNGAAQEW 158
Query: 238 IYGRKFEDENFALKHTGPGVLSMANSGPNSNGSQFFLCTAKTEWLDGKHVVFGHVISGLD 59
I K EN AL + PN+ G F+ TA L+ K VVFG VI+G D
Sbjct: 159 ILKAKASGEN-ALSPKHEAFMIGTTKNPNNKGFDLFITTAPIPDLNDKLVVFGQVINGQD 217
Query: 58 VMKKME 41
+++++E
Sbjct: 218 IVQEIE 223
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 52.8 bits (121), Expect(2) = 5e-10
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Frame = -3
Query: 229 RKFEDE-NFALKHTGPGVLSMANSGPNSNGSQFFLCTAK-TEWLDGKHVVFGHVISGLDV 56
R F+DE + L+H+ G ++MA++G N N SQF++ ++LD KH VFG V G D
Sbjct: 106 RFFDDEIHPELRHSKMGTIAMASAGENCNASQFYITLRDGVDYLDDKHTVFGMVAEGFDT 165
Query: 55 MKKM-ERYGSKSG 20
+ K+ E Y G
Sbjct: 166 ITKINETYVDDKG 178
Score = 29.1 bits (62), Expect(2) = 5e-10
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = -3
Query: 421 IGRIIMMLRADIVPKTAENFRSLCTHEKGFGYQGSSFHRIIPE--FMCQGGDFTNHNGTG 248
+G I + L D+ P T +NF LC +G G +F + + + C+ G +
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLCKGNEGLVAGGLAFRKQLSGQFWRCRAGATGSGFDVK 68
Query: 247 GKSIYGRKF 221
G S G F
Sbjct: 69 GMSFPGYSF 77
>03_05_0235 - 22214700-22214914,22218782-22219045,22219258-22219294
Length = 171
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Frame = -3
Query: 793 GDLVDVQIPLDYETEKHRGXXXXXXXXXXXXXXXXXXXXDSELFGRTIRVNIAAPQRIKE 614
G++ DV+ PLD T+KHR +ELFGR + VN A P+RIK
Sbjct: 32 GEIKDVKTPLDQATQKHRSFGFVTFLEREDAAAAMDNMDGAELFGRVLTVNYAFPERIKG 91
Query: 613 G----STRPVWSD-DSWLQKHAGE 557
G + +P+W+D D+W ++ E
Sbjct: 92 GEQGWAAQPIWADADTWFERQQQE 115
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 45.6 bits (103), Expect = 5e-05
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = -3
Query: 202 LKHTGPGVLSMA-NSGPNSNGSQFFLCTAKTEWLDGKHVVFGHVISGLDVMKKMER 38
+KH G+LSM +S PNS GS F + LDG++ VFG + G D ++K+E+
Sbjct: 157 VKHVR-GILSMGRHSDPNSGGSSFSILLGDAPHLDGQYAVFGRLTKGDDTLRKLEQ 211
>08_02_0053 + 11721658-11721689,11721960-11722710
Length = 260
Score = 44.0 bits (99), Expect = 1e-04
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 18/141 (12%)
Frame = -3
Query: 433 NKQEIGRIIMMLRADIVPKTAENFRSLCTHEKGFGYQGSSFHRIIP-EFMCQG-----GD 272
+ + +GR+I L ++P T NF++ CT Y+G+ H+++ +F G D
Sbjct: 123 DSEPLGRVIFGLYGRLLPLTTANFKAACT---SAAYRGTLVHKLLQGQFFVAGRQGPRRD 179
Query: 271 FTNHNGTGGKSIYGRKFEDENFALKHTGPGVLSMA----------NSGPNSNGSQFFLCT 122
G + + F LKH PG LS+ PN + +F + T
Sbjct: 180 RGEVQPPTGLVRNAETIDPKAFELKHARPGTLSLCLGQNDDDDDIKLNPNYHNVEFLVTT 239
Query: 121 --AKTEWLDGKHVVFGHVISG 65
LDG+++VFG V+ G
Sbjct: 240 GPGPCPELDGQNIVFGTVLEG 260
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = -3
Query: 457 QVYFDISVNKQEIGRIIMMLRADIVPKTAENFRSLCTHEKGFGYQGSSFHRIIPEFMCQG 278
+ + D+S+ + GRI + L D P A F SL T G GY+ F +I+P ++ G
Sbjct: 76 KAFLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVT---GVGYRRKEFVKIVPGYVQHG 132
Query: 277 G 275
G
Sbjct: 133 G 133
Score = 32.3 bits (70), Expect = 0.46
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 148 NGSQFFLCTAKTEWLDGKHVVFGHVISGLDVMKKM 44
NG++F + T LD +V G V+ G+DV+ K+
Sbjct: 206 NGTEFVITTGDAPELDASALVVGRVVDGMDVLGKI 240
>10_01_0310 + 3425099-3425218
Length = 39
Score = 32.3 bits (70), Expect = 0.46
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 418 GRIIMMLRADIVPKTAENFRSLCT 347
G +++ AD VPKT ENFR +CT
Sbjct: 8 GSVVIEQFADKVPKTTENFRPMCT 31
>01_01_0510 -
3723983-3724416,3724895-3725766,3725797-3726791,
3727332-3727439
Length = 802
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 475 IEKRNPQVYFDISVNKQEIGRIIMMLRADIVPKTAENFRSLCTH 344
+ K +VY I + K +GR M+ I P+ E+F C H
Sbjct: 47 VGKGATKVYSTIDLEKARVGRTRMITNEPINPRWYESFHIYCAH 90
>05_07_0290 + 29016410-29018920
Length = 836
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/49 (24%), Positives = 20/49 (40%)
Frame = +2
Query: 266 REVSSLTHEFWNDSMKATALVTETFLVCTQRSKVLRCFWDYVGSKHHNY 412
RE L H+ WN +K ++ L + ++ W+Y S Y
Sbjct: 546 REAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKY 594
>01_03_0010 -
11608537-11608786,11608816-11608940,11609152-11609217,
11609741-11609872,11610507-11610608,11610743-11610940,
11611015-11611161,11611321-11611431,11613241-11613780,
11613847-11614003,11614148-11614297,11614375-11614514,
11615346-11615468,11615561-11615677,11617184-11617357,
11617768-11617909,11618076-11618194,11619773-11619955
Length = 991
Score = 28.3 bits (60), Expect = 7.4
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 344 VCTQRSKVLRCFWDYVGSKHHNYTAYF 424
+C + +L+ +D VGSK H+Y +++
Sbjct: 723 ICRGPNSILKNLYDVVGSKAHDYISFY 749
>02_05_0593 - 30217432-30218232
Length = 266
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 428 TRNRPYNYDASSRHSPKNSG 369
T ++P + DASS+H P N+G
Sbjct: 184 TESKPNSTDASSKHGPPNAG 203
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,976,302
Number of Sequences: 37544
Number of extensions: 453714
Number of successful extensions: 1097
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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