Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11k14
(287 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118357-1|AAM48386.1| 920|Drosophila melanogaster RE03056p pro... 24 1.2
AE013599-1937|AAM68547.1| 920|Drosophila melanogaster CG30480-P... 24 1.2
BT022206-1|AAY51600.2| 762|Drosophila melanogaster IP01025p pro... 28 2.2
AY052069-1|AAK93493.1| 502|Drosophila melanogaster SD02279p pro... 28 2.2
AF125986-1|AAD22080.1| 704|Drosophila melanogaster putative tra... 28 2.2
AE014298-1028|AAF46251.3| 704|Drosophila melanogaster CG9653-PA... 28 2.2
AE014134-3005|AAF53730.2| 716|Drosophila melanogaster CG10431-P... 28 2.2
AB023583-1|BAA76710.1| 704|Drosophila melanogaster Brk protein. 28 2.2
AE014297-1208|AAG22141.1| 503|Drosophila melanogaster CG4655-PA... 27 2.9
BT021210-1|AAX33358.1| 1557|Drosophila melanogaster SD09985p pro... 27 3.9
AY052145-1|AAK93569.1| 966|Drosophila melanogaster SD10481p pro... 27 3.9
AF100152-1|AAC80557.1| 1557|Drosophila melanogaster connector en... 27 3.9
AE013599-2549|AAF57801.1| 966|Drosophila melanogaster CG4996-PA... 27 3.9
AE013599-2454|AAF57874.1| 1557|Drosophila melanogaster CG6556-PA... 27 3.9
AE014297-152|AAF52092.2| 2228|Drosophila melanogaster CG17735-PA... 27 5.1
AY060249-1|AAL25288.1| 239|Drosophila melanogaster GH07389p pro... 26 6.8
AE014296-1866|ABC66154.1| 195|Drosophila melanogaster CG34050-P... 26 6.8
AE013599-772|AAF58998.1| 474|Drosophila melanogaster CG8084-PA ... 26 6.8
AY118543-1|AAM49912.1| 705|Drosophila melanogaster LD28410p pro... 24 7.8
AF241270-1|AAF81195.1| 705|Drosophila melanogaster frizzled 4 p... 24 7.8
AE014298-1020|AAF46245.2| 705|Drosophila melanogaster CG4626-PB... 24 7.8
AE014298-1019|AAN09202.1| 705|Drosophila melanogaster CG4626-PA... 24 7.8
BT001903-1|AAN71692.1| 913|Drosophila melanogaster SD22693p pro... 26 9.0
AY070517-1|AAL47988.1| 593|Drosophila melanogaster GH21463p pro... 26 9.0
AE014296-1326|AAF50515.1| 593|Drosophila melanogaster CG32369-P... 26 9.0
AE014296-1325|AAF50514.2| 1066|Drosophila melanogaster CG32369-P... 26 9.0
AE013599-2254|AAF58012.1| 442|Drosophila melanogaster CG8048-PC... 26 9.0
>AY118357-1|AAM48386.1| 920|Drosophila melanogaster RE03056p
protein.
Length = 920
Score = 23.8 bits (49), Expect(2) = 1.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 203 HHHHRRSQHFVDLVAS 156
HHHH Q V++VA+
Sbjct: 51 HHHHHERQENVEVVAT 66
Score = 23.4 bits (48), Expect(2) = 1.2
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = -1
Query: 215 RQNYHHHHRRSQH 177
+ +HHHH R H
Sbjct: 41 KHRHHHHHHRHHH 53
>AE013599-1937|AAM68547.1| 920|Drosophila melanogaster CG30480-PA
protein.
Length = 920
Score = 23.8 bits (49), Expect(2) = 1.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 203 HHHHRRSQHFVDLVAS 156
HHHH Q V++VA+
Sbjct: 51 HHHHHERQENVEVVAT 66
Score = 23.4 bits (48), Expect(2) = 1.2
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = -1
Query: 215 RQNYHHHHRRSQH 177
+ +HHHH R H
Sbjct: 41 KHRHHHHHHRHHH 53
>BT022206-1|AAY51600.2| 762|Drosophila melanogaster IP01025p
protein.
Length = 762
Score = 27.9 bits (59), Expect = 2.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 212 QNYHHHHRRSQHFVDLV 162
+N HHH R+ HFV L+
Sbjct: 569 KNLHHHRRQKAHFVKLI 585
>AY052069-1|AAK93493.1| 502|Drosophila melanogaster SD02279p
protein.
Length = 502
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -1
Query: 239 YLIITES*RQNYHHHHRRSQHFVDLVASIKRQD 141
YL+ + + ++HHHH Q +D A+ + QD
Sbjct: 262 YLLDDDEEQDHHHHHHHHRQEDLDEGAAEEEQD 294
>AF125986-1|AAD22080.1| 704|Drosophila melanogaster putative
transcription factor protein.
Length = 704
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -1
Query: 239 YLIITES*RQNYHHHHRRSQHFVDLVASIKRQD 141
YL+ + + ++HHHH Q +D A+ + QD
Sbjct: 464 YLLDDDEEQDHHHHHHHHRQEDLDEGAAEEEQD 496
>AE014298-1028|AAF46251.3| 704|Drosophila melanogaster CG9653-PA
protein.
Length = 704
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -1
Query: 239 YLIITES*RQNYHHHHRRSQHFVDLVASIKRQD 141
YL+ + + ++HHHH Q +D A+ + QD
Sbjct: 464 YLLDDDEEQDHHHHHHHHRQEDLDEGAAEEEQD 496
>AE014134-3005|AAF53730.2| 716|Drosophila melanogaster CG10431-PA
protein.
Length = 716
Score = 27.9 bits (59), Expect = 2.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 212 QNYHHHHRRSQHFVDLV 162
+N HHH R+ HFV L+
Sbjct: 523 KNLHHHRRQKAHFVKLI 539
>AB023583-1|BAA76710.1| 704|Drosophila melanogaster Brk protein.
Length = 704
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -1
Query: 239 YLIITES*RQNYHHHHRRSQHFVDLVASIKRQD 141
YL+ + + ++HHHH Q +D A+ + QD
Sbjct: 464 YLLDDDEEQDHHHHHHHHRQEDLDEGAAEEEQD 496
>AE014297-1208|AAG22141.1| 503|Drosophila melanogaster CG4655-PA,
isoform A protein.
Length = 503
Score = 27.5 bits (58), Expect = 2.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 254 KRDLWYLIITES*RQNYHHHHRRSQH 177
+R+ +Y S Q++HHHH+ H
Sbjct: 54 QRECYYYAPATSPHQHHHHHHQHHHH 79
>BT021210-1|AAX33358.1| 1557|Drosophila melanogaster SD09985p protein.
Length = 1557
Score = 27.1 bits (57), Expect = 3.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 215 RQNYHHHHRRSQHFVDLV 162
RQ +HHHH QH + V
Sbjct: 1178 RQEHHHHHHHHQHHLQHV 1195
>AY052145-1|AAK93569.1| 966|Drosophila melanogaster SD10481p
protein.
Length = 966
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 66 NLWLIISTKKFTSFSRTILKHNLLKILAFY-GRDQIYEVLAPAVVM 200
+LW + + +F+RT L L+ILA Y R+ + EVL V +
Sbjct: 153 SLWTCQKARSYLNFARTNLTTTSLEILASYRKREVLKEVLDTLVAI 198
>AF100152-1|AAC80557.1| 1557|Drosophila melanogaster connector
enhancer of KSR proteinCNK protein.
Length = 1557
Score = 27.1 bits (57), Expect = 3.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 215 RQNYHHHHRRSQHFVDLV 162
RQ +HHHH QH + V
Sbjct: 1178 RQEHHHHHHHHQHHLQHV 1195
>AE013599-2549|AAF57801.1| 966|Drosophila melanogaster CG4996-PA
protein.
Length = 966
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 66 NLWLIISTKKFTSFSRTILKHNLLKILAFY-GRDQIYEVLAPAVVM 200
+LW + + +F+RT L L+ILA Y R+ + EVL V +
Sbjct: 153 SLWTCQKARSYLNFARTNLTTTSLEILASYRKREVLKEVLDTLVAI 198
>AE013599-2454|AAF57874.1| 1557|Drosophila melanogaster CG6556-PA
protein.
Length = 1557
Score = 27.1 bits (57), Expect = 3.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 215 RQNYHHHHRRSQHFVDLV 162
RQ +HHHH QH + V
Sbjct: 1178 RQEHHHHHHHHQHHLQHV 1195
>AE014297-152|AAF52092.2| 2228|Drosophila melanogaster CG17735-PA
protein.
Length = 2228
Score = 26.6 bits (56), Expect = 5.1
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = -1
Query: 212 QNYHHHHRRSQ 180
QN+HHHH++SQ
Sbjct: 1058 QNHHHHHQQSQ 1068
>AY060249-1|AAL25288.1| 239|Drosophila melanogaster GH07389p
protein.
Length = 239
Score = 26.2 bits (55), Expect = 6.8
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -1
Query: 212 QNYHHHHRRSQH 177
Q++HHHHR ++H
Sbjct: 219 QHHHHHHRHTKH 230
>AE014296-1866|ABC66154.1| 195|Drosophila melanogaster CG34050-PA
protein.
Length = 195
Score = 26.2 bits (55), Expect = 6.8
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 215 RQNYHHHHRRSQHFVDLVASIKRQD 141
+Q++HHHH H+ + K+ D
Sbjct: 6 QQHHHHHHHHHNHYHQPQLTAKKMD 30
>AE013599-772|AAF58998.1| 474|Drosophila melanogaster CG8084-PA
protein.
Length = 474
Score = 26.2 bits (55), Expect = 6.8
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -1
Query: 212 QNYHHHHRRSQH 177
Q++HHHHR ++H
Sbjct: 454 QHHHHHHRHTKH 465
>AY118543-1|AAM49912.1| 705|Drosophila melanogaster LD28410p
protein.
Length = 705
Score = 23.8 bits (49), Expect(2) = 7.8
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -1
Query: 206 YHHHHRRSQH 177
+HHHH++ QH
Sbjct: 646 HHHHHQQQQH 655
Score = 20.6 bits (41), Expect(2) = 7.8
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -1
Query: 215 RQNYHHHHRRSQ 180
R + HHHH + Q
Sbjct: 642 RHSPHHHHHQQQ 653
>AF241270-1|AAF81195.1| 705|Drosophila melanogaster frizzled 4
protein.
Length = 705
Score = 23.8 bits (49), Expect(2) = 7.8
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -1
Query: 206 YHHHHRRSQH 177
+HHHH++ QH
Sbjct: 646 HHHHHQQQQH 655
Score = 20.6 bits (41), Expect(2) = 7.8
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -1
Query: 215 RQNYHHHHRRSQ 180
R + HHHH + Q
Sbjct: 642 RHSPHHHHHQQQ 653
>AE014298-1020|AAF46245.2| 705|Drosophila melanogaster CG4626-PB,
isoform B protein.
Length = 705
Score = 23.8 bits (49), Expect(2) = 7.8
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -1
Query: 206 YHHHHRRSQH 177
+HHHH++ QH
Sbjct: 646 HHHHHQQQQH 655
Score = 20.6 bits (41), Expect(2) = 7.8
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -1
Query: 215 RQNYHHHHRRSQ 180
R + HHHH + Q
Sbjct: 642 RHSPHHHHHQQQ 653
>AE014298-1019|AAN09202.1| 705|Drosophila melanogaster CG4626-PA,
isoform A protein.
Length = 705
Score = 23.8 bits (49), Expect(2) = 7.8
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -1
Query: 206 YHHHHRRSQH 177
+HHHH++ QH
Sbjct: 646 HHHHHQQQQH 655
Score = 20.6 bits (41), Expect(2) = 7.8
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -1
Query: 215 RQNYHHHHRRSQ 180
R + HHHH + Q
Sbjct: 642 RHSPHHHHHQQQ 653
>BT001903-1|AAN71692.1| 913|Drosophila melanogaster SD22693p
protein.
Length = 913
Score = 25.8 bits (54), Expect = 9.0
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 215 RQNYHHHHRRSQHFVDL 165
+Q +HHHH H V L
Sbjct: 362 KQQHHHHHHHHHHHVHL 378
>AY070517-1|AAL47988.1| 593|Drosophila melanogaster GH21463p
protein.
Length = 593
Score = 25.8 bits (54), Expect = 9.0
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 215 RQNYHHHHRRSQHFVDL 165
+Q +HHHH H V L
Sbjct: 42 KQQHHHHHHHHHHHVHL 58
>AE014296-1326|AAF50515.1| 593|Drosophila melanogaster CG32369-PB,
isoform B protein.
Length = 593
Score = 25.8 bits (54), Expect = 9.0
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 215 RQNYHHHHRRSQHFVDL 165
+Q +HHHH H V L
Sbjct: 42 KQQHHHHHHHHHHHVHL 58
>AE014296-1325|AAF50514.2| 1066|Drosophila melanogaster CG32369-PA,
isoform A protein.
Length = 1066
Score = 25.8 bits (54), Expect = 9.0
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 215 RQNYHHHHRRSQHFVDL 165
+Q +HHHH H V L
Sbjct: 515 KQQHHHHHHHHHHHVHL 531
>AE013599-2254|AAF58012.1| 442|Drosophila melanogaster CG8048-PC,
isoform C protein.
Length = 442
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 212 QNYHHHHRRSQHFVDLVASI 153
Q+YHHHH Q DL A +
Sbjct: 134 QHYHHHHHHHQLPQDLKAEL 153
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,139,895
Number of Sequences: 53049
Number of extensions: 149187
Number of successful extensions: 1436
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1336
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 486883320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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