Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11k10
(803 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC115387-1|AAI15388.1| 1157|Homo sapiens DUSP27 protein protein. 34 0.52
AL158837-4|CAH69958.1| 1158|Homo sapiens novel protein protein. 34 0.52
AF119045-1|AAK02011.1| 661|Homo sapiens unknown protein. 34 0.52
Y09765-1|CAA70904.1| 506|Homo sapiens GABA receptor epsilon sub... 33 1.2
Y09763-1|CAA70903.1| 506|Homo sapiens GABRE protein. 33 1.2
Y07637-1|CAA68914.1| 505|Homo sapiens putative GABA-gated chlor... 33 1.2
X83973-1|CAA58807.1| 886|Homo sapiens transcription factor prot... 33 1.2
U92283-1|AAB94645.1| 506|Homo sapiens GABA-A receptor epsilon s... 33 1.2
U66661-1|AAB49284.1| 506|Homo sapiens GABA-A receptor epsilon s... 33 1.2
AL353701-3|CAI94997.2| 905|Homo sapiens transcription terminati... 33 1.2
AF380176-1|AAK57515.1| 1431|Homo sapiens HBV pX associated prote... 33 1.2
AF227948-1|AAF61709.2| 1189|Homo sapiens HBV pX associated prote... 33 1.2
AY190519-1|AAO38848.1| 1692|Homo sapiens Rab3A-interacting molec... 33 1.6
AL590011-1|CAI16961.1| 1039|Homo sapiens regulating synaptic mem... 33 1.6
AL445256-1|CAI39598.1| 1039|Homo sapiens regulating synaptic mem... 33 1.6
AL390056-1|CAI21554.1| 1039|Homo sapiens regulating synaptic mem... 33 1.6
AL034373-1|CAI20558.1| 1039|Homo sapiens regulating synaptic mem... 33 1.6
AB051866-1|BAB87242.1| 1470|Homo sapiens RIM long form protein. 33 1.6
AB045726-1|BAB87121.1| 1028|Homo sapiens RIM short form protein. 33 1.6
AB002338-1|BAA20798.1| 1053|Homo sapiens KIAA0340 protein. 33 1.6
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 32 2.8
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 32 2.8
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 32 2.8
AB016090-1|BAA83716.1| 802|Homo sapiens RNA binding protein pro... 32 2.8
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 32 2.8
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 32 2.8
U84664-1|AAC51185.1| 1411|Homo sapiens putative nucleolar traffi... 31 3.7
U79659-1|AAB40722.1| 1411|Homo sapiens Treacher Collins syndrome... 31 3.7
U76366-1|AAC51181.1| 1411|Homo sapiens TCOF1 protein. 31 3.7
U40847-1|AAC50903.1| 1411|Homo sapiens TCOF1 protein. 31 3.7
BC033093-1|AAH33093.1| 958|Homo sapiens Treacher Collins-France... 31 3.7
BC027252-1|AAH27252.1| 1126|Homo sapiens TCOF1 protein protein. 31 3.7
BC016144-1|AAH16144.1| 1414|Homo sapiens Unknown (protein for IM... 31 3.7
BC014559-1|AAH14559.1| 958|Homo sapiens Treacher Collins-France... 31 3.7
BC011764-1|AAH11764.1| 958|Homo sapiens Treacher Collins-France... 31 3.7
AY460334-1|AAR87774.1| 1488|Homo sapiens treacle major isoform p... 31 3.7
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 31 3.7
M57609-1|AAA52564.1| 1596|Homo sapiens DNA-binding protein protein. 31 4.9
BX470253-2|CAI16294.1| 1530|Homo sapiens chromosome 1 open readi... 31 4.9
BC117168-1|AAI17169.1| 1580|Homo sapiens GLI-Kruppel family memb... 31 4.9
BC113616-1|AAI13617.1| 1580|Homo sapiens GLI-Kruppel family memb... 31 4.9
BC073884-1|AAH73884.1| 601|Homo sapiens TAF3 protein protein. 31 4.9
BC062352-1|AAH62352.1| 771|Homo sapiens TAF3 protein protein. 31 4.9
BC045106-1|AAH45106.1| 539|Homo sapiens TAF3 protein protein. 31 4.9
BC017320-1|AAH17320.1| 539|Homo sapiens Unknown (protein for IM... 31 4.9
AL834414-1|CAD39076.1| 625|Homo sapiens hypothetical protein pr... 31 4.9
AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,... 31 4.9
AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,... 31 4.9
AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,... 31 4.9
AL117661-1|CAB56032.1| 681|Homo sapiens hypothetical protein pr... 31 4.9
AK127470-1|BAC86994.1| 1184|Homo sapiens ). protein. 31 4.9
AJ292190-1|CAC34475.1| 727|Homo sapiens TAFII140 protein protein. 31 4.9
AJ250408-1|CAB59315.1| 1580|Homo sapiens GLI3 protein protein. 31 4.9
AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein. 31 4.9
BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein. 31 6.4
BC065499-1|AAH65499.1| 1797|Homo sapiens microtubule associated ... 31 6.4
AL645480-1|CAH73244.1| 1798|Homo sapiens microtubule associated ... 31 6.4
AL603888-2|CAI16562.1| 1798|Homo sapiens microtubule associated ... 31 6.4
AL603882-2|CAI16217.1| 1798|Homo sapiens microtubule associated ... 31 6.4
AL358075-5|CAI21705.1| 1798|Homo sapiens microtubule associated ... 31 6.4
AC005026-1|AAP21869.1| 376|Homo sapiens unknown protein. 31 6.4
AB047005-1|BAB40778.1| 1734|Homo sapiens MAST205 protein. 31 6.4
AB018350-1|BAA34527.2| 1329|Homo sapiens KIAA0807 protein protein. 31 6.4
Y12473-1|CAA73077.1| 167|Homo sapiens centrin protein. 30 8.5
CR450346-1|CAG29342.1| 167|Homo sapiens CETN3 protein. 30 8.5
BT006688-1|AAP35334.1| 167|Homo sapiens centrin, EF-hand protei... 30 8.5
BC112040-1|AAI12041.1| 167|Homo sapiens centrin 3 protein. 30 8.5
BC109280-1|AAI09281.2| 970|Homo sapiens DNAJC6 protein protein. 30 8.5
BC109279-1|AAI09280.2| 970|Homo sapiens DNAJC6 protein protein. 30 8.5
BC093793-1|AAH93793.1| 167|Homo sapiens centrin, EF-hand protei... 30 8.5
BC051722-1|AAH51722.1| 442|Homo sapiens DNAJC6 protein protein. 30 8.5
BC005383-1|AAH05383.1| 167|Homo sapiens centrin, EF-hand protei... 30 8.5
AL355487-2|CAI23548.1| 970|Homo sapiens DnaJ (Hsp40) homolog, s... 30 8.5
AL355487-1|CAI23547.1| 913|Homo sapiens DnaJ (Hsp40) homolog, s... 30 8.5
AL139294-3|CAI18999.1| 970|Homo sapiens DnaJ (Hsp40) homolog, s... 30 8.5
AL139294-1|CAI18997.1| 913|Homo sapiens DnaJ (Hsp40) homolog, s... 30 8.5
AK122582-1|BAC56923.1| 1383|Homo sapiens FLJ00269 protein protein. 30 8.5
AB007942-1|BAA32318.2| 937|Homo sapiens KIAA0473 protein protein. 30 8.5
>BC115387-1|AAI15388.1| 1157|Homo sapiens DUSP27 protein protein.
Length = 1157
Score = 34.3 bits (75), Expect = 0.52
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = -3
Query: 279 SPETCKQRREPSLGRENLKKYRETSDTEKNESDDYSEEIASKNMDSSVVESDGVLQELGI 100
+PE+ ++ P R N + R+ D E++ D+SE A + S + S +E G
Sbjct: 1045 TPESSEREESPEPQRPNWARSRDWEDVEESSKSDFSEFGAKRKFTQSFMRS----EEEGE 1100
Query: 99 KRRTRRGKFAPFA 61
K RT + FA
Sbjct: 1101 KERTENREEGRFA 1113
>AL158837-4|CAH69958.1| 1158|Homo sapiens novel protein protein.
Length = 1158
Score = 34.3 bits (75), Expect = 0.52
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = -3
Query: 279 SPETCKQRREPSLGRENLKKYRETSDTEKNESDDYSEEIASKNMDSSVVESDGVLQELGI 100
+PE+ ++ P R N + R+ D E++ D+SE A + S + S +E G
Sbjct: 1045 TPESSEREESPEPQRPNWARSRDWEDVEESSKSDFSEFGAKRKFTQSFMRS----EEEGE 1100
Query: 99 KRRTRRGKFAPFA 61
K RT + FA
Sbjct: 1101 KERTENREEGRFA 1113
>AF119045-1|AAK02011.1| 661|Homo sapiens unknown protein.
Length = 661
Score = 34.3 bits (75), Expect = 0.52
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = -3
Query: 279 SPETCKQRREPSLGRENLKKYRETSDTEKNESDDYSEEIASKNMDSSVVESDGVLQELGI 100
+PE+ ++ P R N + R+ D E++ D+SE A + S + S +E G
Sbjct: 548 TPESSEREESPEPQRPNWARSRDWEDVEESSKSDFSEFGAKRKFTQSFMRS----EEEGE 603
Query: 99 KRRTRRGKFAPFA 61
K RT + FA
Sbjct: 604 KERTENREEGRFA 616
>Y09765-1|CAA70904.1| 506|Homo sapiens GABA receptor epsilon
subunit protein.
Length = 506
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +3
Query: 600 C*VVSSGGSSNETSPGSIS**RPCP*FRRLSEISCQEQTCCSWCRNFR 743
C +V++ GS E P + P P C + CC WC+ F+
Sbjct: 407 CQIVTTEGSDGEERPSCSAQQPPSPGSPEGPRSLCSKLACCEWCKRFK 454
>Y09763-1|CAA70903.1| 506|Homo sapiens GABRE protein.
Length = 506
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +3
Query: 600 C*VVSSGGSSNETSPGSIS**RPCP*FRRLSEISCQEQTCCSWCRNFR 743
C +V++ GS E P + P P C + CC WC+ F+
Sbjct: 407 CQIVTTEGSDGEERPSCSAQQPPSPGSPEGPRSLCSKLACCEWCKRFK 454
>Y07637-1|CAA68914.1| 505|Homo sapiens putative GABA-gated chloride
channel protein.
Length = 505
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +3
Query: 600 C*VVSSGGSSNETSPGSIS**RPCP*FRRLSEISCQEQTCCSWCRNFR 743
C +V++ GS E P + P P C + CC WC+ F+
Sbjct: 406 CQIVTTEGSDGEERPSCSAQQPPSPGSPEGPRSLCSKLACCEWCKRFK 453
>X83973-1|CAA58807.1| 886|Homo sapiens transcription factor
protein.
Length = 886
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = -3
Query: 255 REPSLGRENLKKYRETSDTEKNES-DDYSEEIASKNMDSSV---VESDGVLQELGIKRRT 88
+E + ++ KK + TS S DD+S + SKN +S++ VE DG + E G+K R
Sbjct: 380 KESNSTKKKSKKRKLTSVKRARVSGDDFS--VPSKNSESTLFDSVEGDGAMMEEGVKSRP 437
Query: 87 RRGK 76
R+ K
Sbjct: 438 RQKK 441
>U92283-1|AAB94645.1| 506|Homo sapiens GABA-A receptor epsilon
subunit protein.
Length = 506
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +3
Query: 600 C*VVSSGGSSNETSPGSIS**RPCP*FRRLSEISCQEQTCCSWCRNFR 743
C +V++ GS E P + P P C + CC WC+ F+
Sbjct: 407 CQIVTTEGSDGEERPSCSAQQPPSPGSPEGPRSLCSKLACCEWCKRFK 454
>U66661-1|AAB49284.1| 506|Homo sapiens GABA-A receptor epsilon
subunit protein.
Length = 506
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +3
Query: 600 C*VVSSGGSSNETSPGSIS**RPCP*FRRLSEISCQEQTCCSWCRNFR 743
C +V++ GS E P + P P C + CC WC+ F+
Sbjct: 407 CQIVTTEGSDGEERPSCSAQQPPSPGSPEGPRSLCSKLACCEWCKRFK 454
>AL353701-3|CAI94997.2| 905|Homo sapiens transcription termination
factor, RNA polymerase I protein.
Length = 905
Score = 33.1 bits (72), Expect = 1.2
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = -3
Query: 255 REPSLGRENLKKYRETSDTEKNES-DDYSEEIASKNMDSSV---VESDGVLQELGIKRRT 88
+E + ++ KK + TS S DD+S + SKN +S++ VE DG + E G+K R
Sbjct: 380 KESNSTKKKSKKRKLTSVKRARVSGDDFS--VPSKNSESTLFDSVEGDGAMMEEGVKSRP 437
Query: 87 RRGK 76
R+ K
Sbjct: 438 RQKK 441
>AF380176-1|AAK57515.1| 1431|Homo sapiens HBV pX associated protein 8
large isoform protein.
Length = 1431
Score = 33.1 bits (72), Expect = 1.2
Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 6/130 (4%)
Frame = -3
Query: 447 KRCPRAKKTATGSPKNCSSNESSDEELKVRVKTDGRPDRFFY--ETLMCQQTDHPKFGSP 274
+R R + S N ES DE K+ +DG D F E + D P
Sbjct: 1074 RRKKRRRLNDLDSDSNLDEEESEDE-FKI---SDGSQDEFVVSDENPDESEEDPPSNEDS 1129
Query: 273 ET--CKQR--REPSLGRENLKKYRETSDTEKNESDDYSEEIASKNMDSSVVESDGVLQEL 106
+T C +R R PS ++ R + +K DD EE + DS SD +
Sbjct: 1130 DTDFCSRRLRRHPSRPMRQSRRLRRKTPKKKYSDDDEEEESEENSRDSESDFSDDFSDDF 1189
Query: 105 GIKRRTRRGK 76
++ R RR +
Sbjct: 1190 -VETRRRRSR 1198
>AF227948-1|AAF61709.2| 1189|Homo sapiens HBV pX associated protein-8
protein.
Length = 1189
Score = 33.1 bits (72), Expect = 1.2
Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 6/130 (4%)
Frame = -3
Query: 447 KRCPRAKKTATGSPKNCSSNESSDEELKVRVKTDGRPDRFFY--ETLMCQQTDHPKFGSP 274
+R R + S N ES DE K+ +DG D F E + D P
Sbjct: 832 RRKKRRRLNDLDSDSNLDEEESEDE-FKI---SDGSQDEFVVSDENPDESEEDPPSNEDS 887
Query: 273 ET--CKQR--REPSLGRENLKKYRETSDTEKNESDDYSEEIASKNMDSSVVESDGVLQEL 106
+T C +R R PS ++ R + +K DD EE + DS SD +
Sbjct: 888 DTDFCSRRLRRHPSRPMRQSRRLRRKTPKKKYSDDDEEEESEENSRDSESDFSDDFSDDF 947
Query: 105 GIKRRTRRGK 76
++ R RR +
Sbjct: 948 -VETRRRRSR 956
>AY190519-1|AAO38848.1| 1692|Homo sapiens Rab3A-interacting molecule
protein.
Length = 1692
Score = 32.7 bits (71), Expect = 1.6
Identities = 28/109 (25%), Positives = 44/109 (40%)
Frame = -3
Query: 495 AFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELKVRVKTDGRPDRFFYET 316
A + Q PP D + + A G + +S+ S E + R KT G ++
Sbjct: 226 AASSQDAAPPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTPGLSEQNGKGA 285
Query: 315 LMCQQTDHPKFGSPETCKQRREPSLGRENLKKYRETSDTEKNESDDYSE 169
L ++ PK T Q E ++ K+ RE+ EK S DY +
Sbjct: 286 LKSERKRVPK-----TSAQPVEGAVEERERKERRESRRLEKGRSQDYPD 329
>AL590011-1|CAI16961.1| 1039|Homo sapiens regulating synaptic
membrane exocytosis 1 protein.
Length = 1039
Score = 32.7 bits (71), Expect = 1.6
Identities = 28/109 (25%), Positives = 44/109 (40%)
Frame = -3
Query: 495 AFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELKVRVKTDGRPDRFFYET 316
A + Q PP D + + A G + +S+ S E + R KT G ++
Sbjct: 226 AASSQDAAPPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTPGLSEQNGKGA 285
Query: 315 LMCQQTDHPKFGSPETCKQRREPSLGRENLKKYRETSDTEKNESDDYSE 169
L ++ PK T Q E ++ K+ RE+ EK S DY +
Sbjct: 286 LKSERKRVPK-----TSAQPVEGAVEERERKERRESRRLEKGRSQDYPD 329
>AL445256-1|CAI39598.1| 1039|Homo sapiens regulating synaptic
membrane exocytosis 1 protein.
Length = 1039
Score = 32.7 bits (71), Expect = 1.6
Identities = 28/109 (25%), Positives = 44/109 (40%)
Frame = -3
Query: 495 AFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELKVRVKTDGRPDRFFYET 316
A + Q PP D + + A G + +S+ S E + R KT G ++
Sbjct: 226 AASSQDAAPPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTPGLSEQNGKGA 285
Query: 315 LMCQQTDHPKFGSPETCKQRREPSLGRENLKKYRETSDTEKNESDDYSE 169
L ++ PK T Q E ++ K+ RE+ EK S DY +
Sbjct: 286 LKSERKRVPK-----TSAQPVEGAVEERERKERRESRRLEKGRSQDYPD 329
>AL390056-1|CAI21554.1| 1039|Homo sapiens regulating synaptic
membrane exocytosis 1 protein.
Length = 1039
Score = 32.7 bits (71), Expect = 1.6
Identities = 28/109 (25%), Positives = 44/109 (40%)
Frame = -3
Query: 495 AFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELKVRVKTDGRPDRFFYET 316
A + Q PP D + + A G + +S+ S E + R KT G ++
Sbjct: 226 AASSQDAAPPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTPGLSEQNGKGA 285
Query: 315 LMCQQTDHPKFGSPETCKQRREPSLGRENLKKYRETSDTEKNESDDYSE 169
L ++ PK T Q E ++ K+ RE+ EK S DY +
Sbjct: 286 LKSERKRVPK-----TSAQPVEGAVEERERKERRESRRLEKGRSQDYPD 329
>AL034373-1|CAI20558.1| 1039|Homo sapiens regulating synaptic
membrane exocytosis 1 protein.
Length = 1039
Score = 32.7 bits (71), Expect = 1.6
Identities = 28/109 (25%), Positives = 44/109 (40%)
Frame = -3
Query: 495 AFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELKVRVKTDGRPDRFFYET 316
A + Q PP D + + A G + +S+ S E + R KT G ++
Sbjct: 226 AASSQDAAPPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTPGLSEQNGKGA 285
Query: 315 LMCQQTDHPKFGSPETCKQRREPSLGRENLKKYRETSDTEKNESDDYSE 169
L ++ PK T Q E ++ K+ RE+ EK S DY +
Sbjct: 286 LKSERKRVPK-----TSAQPVEGAVEERERKERRESRRLEKGRSQDYPD 329
>AB051866-1|BAB87242.1| 1470|Homo sapiens RIM long form protein.
Length = 1470
Score = 32.7 bits (71), Expect = 1.6
Identities = 28/109 (25%), Positives = 44/109 (40%)
Frame = -3
Query: 495 AFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELKVRVKTDGRPDRFFYET 316
A + Q PP D + + A G + +S+ S E + R KT G ++
Sbjct: 226 AASSQDAAPPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTPGLSEQNGKGA 285
Query: 315 LMCQQTDHPKFGSPETCKQRREPSLGRENLKKYRETSDTEKNESDDYSE 169
L ++ PK T Q E ++ K+ RE+ EK S DY +
Sbjct: 286 LKSERKRVPK-----TSAQPVEGAVEERERKERRESRRLEKGRSQDYPD 329
>AB045726-1|BAB87121.1| 1028|Homo sapiens RIM short form protein.
Length = 1028
Score = 32.7 bits (71), Expect = 1.6
Identities = 28/109 (25%), Positives = 44/109 (40%)
Frame = -3
Query: 495 AFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELKVRVKTDGRPDRFFYET 316
A + Q PP D + + A G + +S+ S E + R KT G ++
Sbjct: 226 AASSQDAAPPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTPGLSEQNGKGA 285
Query: 315 LMCQQTDHPKFGSPETCKQRREPSLGRENLKKYRETSDTEKNESDDYSE 169
L ++ PK T Q E ++ K+ RE+ EK S DY +
Sbjct: 286 LKSERKRVPK-----TSAQPVEGAVEERERKERRESRRLEKGRSQDYPD 329
>AB002338-1|BAA20798.1| 1053|Homo sapiens KIAA0340 protein.
Length = 1053
Score = 32.7 bits (71), Expect = 1.6
Identities = 28/109 (25%), Positives = 44/109 (40%)
Frame = -3
Query: 495 AFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELKVRVKTDGRPDRFFYET 316
A + Q PP D + + A G + +S+ S E + R KT G ++
Sbjct: 251 AASSQDAAPPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTPGLSEQNGKGA 310
Query: 315 LMCQQTDHPKFGSPETCKQRREPSLGRENLKKYRETSDTEKNESDDYSE 169
L ++ PK T Q E ++ K+ RE+ EK S DY +
Sbjct: 311 LKSERKRVPK-----TSAQPVEGAVEERERKERRESRRLEKGRSQDYPD 354
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 31.9 bits (69), Expect = 2.8
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Frame = +3
Query: 72 QTSPSSFSS*CPALEAHRRTPRQK---NPCS---SKLSPQSNHHFHSSPYPMFLCISSSS 233
Q S S SS P+ R TPR+ +PCS S+L P+ +H SSP + +
Sbjct: 927 QRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTK---VKPET 983
Query: 234 PSLDLARVSVCKSPGIRTSGGPSADTSGSR 323
P S+ P ++ P SGS+
Sbjct: 984 PPRQSHSGSISPYPKVKAQTPPGPSLSGSK 1013
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 31.9 bits (69), Expect = 2.8
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Frame = +3
Query: 72 QTSPSSFSS*CPALEAHRRTPRQK---NPCS---SKLSPQSNHHFHSSPYPMFLCISSSS 233
Q S S SS P+ R TPR+ +PCS S+L P+ +H SSP + +
Sbjct: 927 QRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTK---VKPET 983
Query: 234 PSLDLARVSVCKSPGIRTSGGPSADTSGSR 323
P S+ P ++ P SGS+
Sbjct: 984 PPRQSHSGSISPYPKVKAQTPPGPSLSGSK 1013
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 31.9 bits (69), Expect = 2.8
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Frame = +3
Query: 72 QTSPSSFSS*CPALEAHRRTPRQK---NPCS---SKLSPQSNHHFHSSPYPMFLCISSSS 233
Q S S SS P+ R TPR+ +PCS S+L P+ +H SSP + +
Sbjct: 927 QRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTK---VKPET 983
Query: 234 PSLDLARVSVCKSPGIRTSGGPSADTSGSR 323
P S+ P ++ P SGS+
Sbjct: 984 PPRQSHSGSISPYPKVKAQTPPGPSLSGSK 1013
>AB016090-1|BAA83716.1| 802|Homo sapiens RNA binding protein
protein.
Length = 802
Score = 31.9 bits (69), Expect = 2.8
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Frame = +3
Query: 72 QTSPSSFSS*CPALEAHRRTPRQK---NPCS---SKLSPQSNHHFHSSPYPMFLCISSSS 233
Q S S SS P+ R TPR+ +PCS S+L P+ +H SSP + +
Sbjct: 53 QRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTK---VKPET 109
Query: 234 PSLDLARVSVCKSPGIRTSGGPSADTSGSR 323
P S+ P ++ P SGS+
Sbjct: 110 PPRQSHSGSISPYPKVKAQTPPGPSLSGSK 139
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 31.9 bits (69), Expect = 2.8
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Frame = +3
Query: 72 QTSPSSFSS*CPALEAHRRTPRQK---NPCS---SKLSPQSNHHFHSSPYPMFLCISSSS 233
Q S S SS P+ R TPR+ +PCS S+L P+ +H SSP + +
Sbjct: 717 QRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTK---VKPET 773
Query: 234 PSLDLARVSVCKSPGIRTSGGPSADTSGSR 323
P S+ P ++ P SGS+
Sbjct: 774 PPRQSHSGSISPYPKVKAQTPPGPSLSGSK 803
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.9 bits (69), Expect = 2.8
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Frame = +3
Query: 72 QTSPSSFSS*CPALEAHRRTPRQK---NPCS---SKLSPQSNHHFHSSPYPMFLCISSSS 233
Q S S SS P+ R TPR+ +PCS S+L P+ +H SSP + +
Sbjct: 975 QRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTK---VKPET 1031
Query: 234 PSLDLARVSVCKSPGIRTSGGPSADTSGSR 323
P S+ P ++ P SGS+
Sbjct: 1032 PPRQSHSGSISPYPKVKAQTPPGPSLSGSK 1061
>U84664-1|AAC51185.1| 1411|Homo sapiens putative nucleolar
trafficking phosphoprotein protein.
Length = 1411
Score = 31.5 bits (68), Expect = 3.7
Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Frame = -3
Query: 531 KTVSGDEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELK---- 364
+ S G PG A +P PP G V +A K S + + S+EE
Sbjct: 224 RAASAPAKGTPGKGA--TPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKA 281
Query: 363 -VRVKTDGRPDRFFYETLMCQQTDHPKFGSPETCKQRREPSLGRENLKKYRETSDTEKNE 187
++ K G+ + + +++ P+ G+ + P++ + K E S + E
Sbjct: 282 LLQAKASGKTSQVGAASAPAKES--PRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEE 339
Query: 186 SDDYSE 169
SD E
Sbjct: 340 SDSEEE 345
>U79659-1|AAB40722.1| 1411|Homo sapiens Treacher Collins syndrome
protein.
Length = 1411
Score = 31.5 bits (68), Expect = 3.7
Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Frame = -3
Query: 531 KTVSGDEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELK---- 364
+ S G PG A +P PP G V +A K S + + S+EE
Sbjct: 224 RAASAPAKGTPGKGA--TPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKA 281
Query: 363 -VRVKTDGRPDRFFYETLMCQQTDHPKFGSPETCKQRREPSLGRENLKKYRETSDTEKNE 187
++ K G+ + + +++ P+ G+ + P++ + K E S + E
Sbjct: 282 LLQAKASGKTSQVGAASAPAKES--PRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEE 339
Query: 186 SDDYSE 169
SD E
Sbjct: 340 SDSEEE 345
>U76366-1|AAC51181.1| 1411|Homo sapiens TCOF1 protein.
Length = 1411
Score = 31.5 bits (68), Expect = 3.7
Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Frame = -3
Query: 531 KTVSGDEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELK---- 364
+ S G PG A +P PP G V +A K S + + S+EE
Sbjct: 224 RAASAPAKGTPGKGA--TPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKA 281
Query: 363 -VRVKTDGRPDRFFYETLMCQQTDHPKFGSPETCKQRREPSLGRENLKKYRETSDTEKNE 187
++ K G+ + + +++ P+ G+ + P++ + K E S + E
Sbjct: 282 LLQAKASGKTSQVGAASAPAKES--PRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEE 339
Query: 186 SDDYSE 169
SD E
Sbjct: 340 SDSEEE 345
>U40847-1|AAC50903.1| 1411|Homo sapiens TCOF1 protein.
Length = 1411
Score = 31.5 bits (68), Expect = 3.7
Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Frame = -3
Query: 531 KTVSGDEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELK---- 364
+ S G PG A +P PP G V +A K S + + S+EE
Sbjct: 224 RAASAPAKGTPGKGA--TPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKA 281
Query: 363 -VRVKTDGRPDRFFYETLMCQQTDHPKFGSPETCKQRREPSLGRENLKKYRETSDTEKNE 187
++ K G+ + + +++ P+ G+ + P++ + K E S + E
Sbjct: 282 LLQAKASGKTSQVGAASAPAKES--PRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEE 339
Query: 186 SDDYSE 169
SD E
Sbjct: 340 SDSEEE 345
>BC033093-1|AAH33093.1| 958|Homo sapiens Treacher
Collins-Franceschetti syndrome 1 protein.
Length = 958
Score = 31.5 bits (68), Expect = 3.7
Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Frame = -3
Query: 531 KTVSGDEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELK---- 364
+ S G PG A +P PP G V +A K S + + S+EE
Sbjct: 301 RAASAPAKGTPGKGA--TPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKA 358
Query: 363 -VRVKTDGRPDRFFYETLMCQQTDHPKFGSPETCKQRREPSLGRENLKKYRETSDTEKNE 187
++ K G+ + + +++ P+ G+ + P++ + K E S + E
Sbjct: 359 LLQAKASGKTSQVGAASAPAKES--PRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEE 416
Query: 186 SDDYSE 169
SD E
Sbjct: 417 SDSEEE 422
>BC027252-1|AAH27252.1| 1126|Homo sapiens TCOF1 protein protein.
Length = 1126
Score = 31.5 bits (68), Expect = 3.7
Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Frame = -3
Query: 531 KTVSGDEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELK---- 364
+ S G PG A +P PP G V +A K S + + S+EE
Sbjct: 209 RAASAPAKGTPGKGA--TPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKA 266
Query: 363 -VRVKTDGRPDRFFYETLMCQQTDHPKFGSPETCKQRREPSLGRENLKKYRETSDTEKNE 187
++ K G+ + + +++ P+ G+ + P++ + K E S + E
Sbjct: 267 LLQAKASGKTSQVGAASAPAKES--PRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEE 324
Query: 186 SDDYSE 169
SD E
Sbjct: 325 SDSEEE 330
>BC016144-1|AAH16144.1| 1414|Homo sapiens Unknown (protein for
IMAGE:3921754) protein.
Length = 1414
Score = 31.5 bits (68), Expect = 3.7
Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Frame = -3
Query: 531 KTVSGDEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELK---- 364
+ S G PG A +P PP G V +A K S + + S+EE
Sbjct: 301 RAASAPAKGTPGKGA--TPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKA 358
Query: 363 -VRVKTDGRPDRFFYETLMCQQTDHPKFGSPETCKQRREPSLGRENLKKYRETSDTEKNE 187
++ K G+ + + +++ P+ G+ + P++ + K E S + E
Sbjct: 359 LLQAKASGKTSQVGAASAPAKES--PRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEE 416
Query: 186 SDDYSE 169
SD E
Sbjct: 417 SDSEEE 422
>BC014559-1|AAH14559.1| 958|Homo sapiens Treacher
Collins-Franceschetti syndrome 1 protein.
Length = 958
Score = 31.5 bits (68), Expect = 3.7
Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Frame = -3
Query: 531 KTVSGDEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELK---- 364
+ S G PG A +P PP G V +A K S + + S+EE
Sbjct: 301 RAASAPAKGTPGKGA--TPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKA 358
Query: 363 -VRVKTDGRPDRFFYETLMCQQTDHPKFGSPETCKQRREPSLGRENLKKYRETSDTEKNE 187
++ K G+ + + +++ P+ G+ + P++ + K E S + E
Sbjct: 359 LLQAKASGKTSQVGAASAPAKES--PRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEE 416
Query: 186 SDDYSE 169
SD E
Sbjct: 417 SDSEEE 422
>BC011764-1|AAH11764.1| 958|Homo sapiens Treacher
Collins-Franceschetti syndrome 1 protein.
Length = 958
Score = 31.5 bits (68), Expect = 3.7
Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Frame = -3
Query: 531 KTVSGDEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELK---- 364
+ S G PG A +P PP G V +A K S + + S+EE
Sbjct: 301 RAASAPAKGTPGKGA--TPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKA 358
Query: 363 -VRVKTDGRPDRFFYETLMCQQTDHPKFGSPETCKQRREPSLGRENLKKYRETSDTEKNE 187
++ K G+ + + +++ P+ G+ + P++ + K E S + E
Sbjct: 359 LLQAKASGKTSQVGAASAPAKES--PRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEE 416
Query: 186 SDDYSE 169
SD E
Sbjct: 417 SDSEEE 422
>AY460334-1|AAR87774.1| 1488|Homo sapiens treacle major isoform
protein.
Length = 1488
Score = 31.5 bits (68), Expect = 3.7
Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Frame = -3
Query: 531 KTVSGDEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELK---- 364
+ S G PG A +P PP G V +A K S + + S+EE
Sbjct: 301 RAASAPAKGTPGKGA--TPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKA 358
Query: 363 -VRVKTDGRPDRFFYETLMCQQTDHPKFGSPETCKQRREPSLGRENLKKYRETSDTEKNE 187
++ K G+ + + +++ P+ G+ + P++ + K E S + E
Sbjct: 359 LLQAKASGKTSQVGAASAPAKES--PRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEE 416
Query: 186 SDDYSE 169
SD E
Sbjct: 417 SDSEEE 422
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 31.5 bits (68), Expect = 3.7
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +3
Query: 69 AQTSPSS-FSS*CPALEAHRRTPRQKNPCSSKLSPQSNHHFHSSPYPMFLCISSSSPSLD 245
+ +SPSS SS P+ + +P + SS SP S++ SS SSSS S
Sbjct: 70 SSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSP 129
Query: 246 LARVSVCKSPGIRTSGGPSADTS 314
+ S S +S PS+ +S
Sbjct: 130 SSSSSSPSSSSSSSSSSPSSSSS 152
Score = 30.7 bits (66), Expect = 6.4
Identities = 25/82 (30%), Positives = 34/82 (41%)
Frame = +3
Query: 75 TSPSSFSS*CPALEAHRRTPRQKNPCSSKLSPQSNHHFHSSPYPMFLCISSSSPSLDLAR 254
+S SS SS P+ + +P SS S S+ SS SSSSPS +
Sbjct: 94 SSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSS 153
Query: 255 VSVCKSPGIRTSGGPSADTSGS 320
S S +S PS+ + S
Sbjct: 154 PSSSSSSSSSSSSSPSSSSPSS 175
Score = 30.3 bits (65), Expect = 8.5
Identities = 42/132 (31%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Frame = +3
Query: 69 AQTSPSSFSS*CPALEAHRRTPRQKNPCSSKLSPQSNHHFHSSPYPMFLCISSSSPSLDL 248
+ +SPSS SS P+ + + +P SS SP S+ SS SSSSPS
Sbjct: 125 SSSSPSSSSS-SPSSSS---SSSSSSPSSSSSSPSSSSSSSSSSSS---SPSSSSPSSSG 177
Query: 249 ARVSVCKSPGIRTSGGPSADTSG-SRRRTGPAYRRF*LSL*APRQSFRSTSSFLANLSQS 425
+ S S +S PS+ +S S R + P+ S +P S S+SS ++ S
Sbjct: 178 SSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSS--SSTSSPSTSSPSSSSPSSSSPSS 235
Query: 426 SWPLDIFSRHRP 461
S P R RP
Sbjct: 236 SCPSAALGR-RP 246
>M57609-1|AAA52564.1| 1596|Homo sapiens DNA-binding protein protein.
Length = 1596
Score = 31.1 bits (67), Expect = 4.9
Identities = 23/67 (34%), Positives = 33/67 (49%)
Frame = +3
Query: 75 TSPSSFSS*CPALEAHRRTPRQKNPCSSKLSPQSNHHFHSSPYPMFLCISSSSPSLDLAR 254
TS S S P L R +P +NP ++ SP S H + +PY ++ SSPSL +
Sbjct: 159 TSALSSSPTYPDLPFIRISPH-RNPAAASESPFSPPHPYINPYMDYIRSLHSSPSLSMIS 217
Query: 255 VSVCKSP 275
+ SP
Sbjct: 218 ATRGLSP 224
>BX470253-2|CAI16294.1| 1530|Homo sapiens chromosome 1 open reading
frame 173 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 4.9
Identities = 26/96 (27%), Positives = 41/96 (42%)
Frame = -3
Query: 432 AKKTATGSPKNCSSNESSDEELKVRVKTDGRPDRFFYETLMCQQTDHPKFGSPETCKQRR 253
A K GS + E +E K ++T+ R F E + GSPE +
Sbjct: 963 ASKREDGSEEAILGGEEPAKERKEVMRTETRLSPFTGEAEASRM--QVSEGSPEEGSLAK 1020
Query: 252 EPSLGRENLKKYRETSDTEKNESDDYSEEIASKNMD 145
E L +E+++ ++ E N DD +EI K +D
Sbjct: 1021 EAFLCKEDVEGEEMVTEAEANREDD-RKEILPKELD 1055
>BC117168-1|AAI17169.1| 1580|Homo sapiens GLI-Kruppel family member
GLI3 (Greig cephalopolysyndactyly syndrome) protein.
Length = 1580
Score = 31.1 bits (67), Expect = 4.9
Identities = 23/67 (34%), Positives = 33/67 (49%)
Frame = +3
Query: 75 TSPSSFSS*CPALEAHRRTPRQKNPCSSKLSPQSNHHFHSSPYPMFLCISSSSPSLDLAR 254
TS S S P L R +P +NP ++ SP S H + +PY ++ SSPSL +
Sbjct: 159 TSALSSSPTYPDLPFIRISPH-RNPAAASESPFSPPHPYINPYMDYIRSLHSSPSLSMIS 217
Query: 255 VSVCKSP 275
+ SP
Sbjct: 218 ATRGLSP 224
>BC113616-1|AAI13617.1| 1580|Homo sapiens GLI-Kruppel family member
GLI3 (Greig cephalopolysyndactyly syndrome) protein.
Length = 1580
Score = 31.1 bits (67), Expect = 4.9
Identities = 23/67 (34%), Positives = 33/67 (49%)
Frame = +3
Query: 75 TSPSSFSS*CPALEAHRRTPRQKNPCSSKLSPQSNHHFHSSPYPMFLCISSSSPSLDLAR 254
TS S S P L R +P +NP ++ SP S H + +PY ++ SSPSL +
Sbjct: 159 TSALSSSPTYPDLPFIRISPH-RNPAAASESPFSPPHPYINPYMDYIRSLHSSPSLSMIS 217
Query: 255 VSVCKSP 275
+ SP
Sbjct: 218 ATRGLSP 224
>BC073884-1|AAH73884.1| 601|Homo sapiens TAF3 protein protein.
Length = 601
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = -3
Query: 531 KTVSGDEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELKVR 358
KTVS ++ + +P+SP+ P V + + P +T +P S + S E ++V+
Sbjct: 368 KTVSKEKKSPGRSKSPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSEKISKETIQVK 425
>BC062352-1|AAH62352.1| 771|Homo sapiens TAF3 protein protein.
Length = 771
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = -3
Query: 531 KTVSGDEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELKVR 358
KTVS ++ + +P+SP+ P V + + P +T +P S + S E ++V+
Sbjct: 360 KTVSKEKKSPGRSKSPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSEKISKETIQVK 417
>BC045106-1|AAH45106.1| 539|Homo sapiens TAF3 protein protein.
Length = 539
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = -3
Query: 531 KTVSGDEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELKVR 358
KTVS ++ + +P+SP+ P V + + P +T +P S + S E ++V+
Sbjct: 303 KTVSKEKKSPGRSKSPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSEKISKETIQVK 360
>BC017320-1|AAH17320.1| 539|Homo sapiens Unknown (protein for
IMAGE:3547166) protein.
Length = 539
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = -3
Query: 531 KTVSGDEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELKVR 358
KTVS ++ + +P+SP+ P V + + P +T +P S + S E ++V+
Sbjct: 303 KTVSKEKKSPGRSKSPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSEKISKETIQVK 360
>AL834414-1|CAD39076.1| 625|Homo sapiens hypothetical protein
protein.
Length = 625
Score = 31.1 bits (67), Expect = 4.9
Identities = 26/96 (27%), Positives = 41/96 (42%)
Frame = -3
Query: 432 AKKTATGSPKNCSSNESSDEELKVRVKTDGRPDRFFYETLMCQQTDHPKFGSPETCKQRR 253
A K GS + E +E K ++T+ R F E + GSPE +
Sbjct: 59 ASKREDGSEEAILGGEEPAKERKEVMRTETRLSPFTGEAEASRM--QVSEGSPEEGSLAK 116
Query: 252 EPSLGRENLKKYRETSDTEKNESDDYSEEIASKNMD 145
E L +E+++ ++ E N DD +EI K +D
Sbjct: 117 EAFLCKEDVEGEEMVTEAEANREDD-RKEILPKELD 151
>AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = -3
Query: 531 KTVSGDEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELKVR 358
KTVS ++ + +P+SP+ P V + + P +T +P S + S E ++V+
Sbjct: 303 KTVSKEKKSPGRSKSPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSEKISKETIQVK 360
>AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = -3
Query: 531 KTVSGDEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELKVR 358
KTVS ++ + +P+SP+ P V + + P +T +P S + S E ++V+
Sbjct: 303 KTVSKEKKSPGRSKSPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSEKISKETIQVK 360
>AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = -3
Query: 531 KTVSGDEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELKVR 358
KTVS ++ + +P+SP+ P V + + P +T +P S + S E ++V+
Sbjct: 303 KTVSKEKKSPGRSKSPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSEKISKETIQVK 360
>AL117661-1|CAB56032.1| 681|Homo sapiens hypothetical protein
protein.
Length = 681
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = -3
Query: 531 KTVSGDEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELKVR 358
KTVS ++ + +P+SP+ P V + + P +T +P S + S E ++V+
Sbjct: 281 KTVSKEKKSPGRSKSPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSEKISKETIQVK 338
>AK127470-1|BAC86994.1| 1184|Homo sapiens ). protein.
Length = 1184
Score = 31.1 bits (67), Expect = 4.9
Identities = 26/96 (27%), Positives = 41/96 (42%)
Frame = -3
Query: 432 AKKTATGSPKNCSSNESSDEELKVRVKTDGRPDRFFYETLMCQQTDHPKFGSPETCKQRR 253
A K GS + E +E K ++T+ R F E + GSPE +
Sbjct: 963 ASKREDGSEEAILGGEEPAKERKEVMRTETRLSPFTGEAEASRM--QVSEGSPEEGSLAK 1020
Query: 252 EPSLGRENLKKYRETSDTEKNESDDYSEEIASKNMD 145
E L +E+++ ++ E N DD +EI K +D
Sbjct: 1021 EAFLCKEDVEGEEMVTEAEANREDD-RKEILPKELD 1055
>AJ292190-1|CAC34475.1| 727|Homo sapiens TAFII140 protein protein.
Length = 727
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = -3
Query: 531 KTVSGDEAGAPGAFAPQSPRPPLVVGDVKRCPRAKKTATGSPKNCSSNESSDEELKVR 358
KTVS ++ + +P+SP+ P V + + P +T +P S + S E ++V+
Sbjct: 303 KTVSKEKKSPGRSKSPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSEKISKETIQVK 360
>AJ250408-1|CAB59315.1| 1580|Homo sapiens GLI3 protein protein.
Length = 1580
Score = 31.1 bits (67), Expect = 4.9
Identities = 23/67 (34%), Positives = 33/67 (49%)
Frame = +3
Query: 75 TSPSSFSS*CPALEAHRRTPRQKNPCSSKLSPQSNHHFHSSPYPMFLCISSSSPSLDLAR 254
TS S S P L R +P +NP ++ SP S H + +PY ++ SSPSL +
Sbjct: 159 TSALSSSPTYPDLPFIRISPH-RNPAAASESPFSPPHPYINPYMDYIRSLHSSPSLSMIS 217
Query: 255 VSVCKSP 275
+ SP
Sbjct: 218 ATRGLSP 224
>AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein.
Length = 708
Score = 31.1 bits (67), Expect = 4.9
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +3
Query: 153 SSKLSPQSNHHFHSSPYPMFLCISSSSPSLDLARVSVCKSPGIRT-SGGPSADTSGSRRR 329
SS S +S+ H SP P + S S + S +SP + SG S + SR R
Sbjct: 490 SSYASTRSSSHSSRSPNPRASPRYTQSRSTSSEKRSYSRSPSYSSKSGKRSPPSRSSRSR 549
Query: 330 TGPAYRRF 353
P+Y R+
Sbjct: 550 RSPSYSRY 557
>BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein.
Length = 257
Score = 30.7 bits (66), Expect = 6.4
Identities = 25/82 (30%), Positives = 34/82 (41%)
Frame = +3
Query: 75 TSPSSFSS*CPALEAHRRTPRQKNPCSSKLSPQSNHHFHSSPYPMFLCISSSSPSLDLAR 254
+S SS SS P+ + +P SS S S+ SS SSSSPS +
Sbjct: 93 SSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSS 152
Query: 255 VSVCKSPGIRTSGGPSADTSGS 320
S S +S PS+ + S
Sbjct: 153 PSSSSSSSSSSSSSPSSSSPSS 174
Score = 30.3 bits (65), Expect = 8.5
Identities = 42/132 (31%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Frame = +3
Query: 69 AQTSPSSFSS*CPALEAHRRTPRQKNPCSSKLSPQSNHHFHSSPYPMFLCISSSSPSLDL 248
+ +SPSS SS P+ + + +P SS SP S+ SS SSSSPS
Sbjct: 124 SSSSPSSSSS-SPSSSS---SSSSSSPSSSSSSPSSSSSSSSSSSS---SPSSSSPSSSG 176
Query: 249 ARVSVCKSPGIRTSGGPSADTSG-SRRRTGPAYRRF*LSL*APRQSFRSTSSFLANLSQS 425
+ S S +S PS+ +S S R + P+ S +P S S+SS ++ S
Sbjct: 177 SSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSS--SSTSSPSTSSPSSSSPSSSSPSS 234
Query: 426 SWPLDIFSRHRP 461
S P R RP
Sbjct: 235 SCPSAALGR-RP 245
>BC065499-1|AAH65499.1| 1797|Homo sapiens microtubule associated
serine/threonine kinase 2 protein.
Length = 1797
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +3
Query: 75 TSPSSFSS*CPALEAHRRTPRQKNPCSSKLSPQSNHHFHSSPYPMFLCISSSSP 236
T PSS P L+ R+PR+K+ S LSP + H S P P S SP
Sbjct: 1313 TRPSSLHGLAPKLQRQYRSPRRKSAGSIPLSPLA--HTPSPPPPTASPQRSPSP 1364
>AL645480-1|CAH73244.1| 1798|Homo sapiens microtubule associated
serine/threonine kinase 2 protein.
Length = 1798
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +3
Query: 75 TSPSSFSS*CPALEAHRRTPRQKNPCSSKLSPQSNHHFHSSPYPMFLCISSSSP 236
T PSS P L+ R+PR+K+ S LSP + H S P P S SP
Sbjct: 1314 TRPSSLHGLAPKLQRQYRSPRRKSAGSIPLSPLA--HTPSPPPPTASPQRSPSP 1365
>AL603888-2|CAI16562.1| 1798|Homo sapiens microtubule associated
serine/threonine kinase 2 protein.
Length = 1798
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +3
Query: 75 TSPSSFSS*CPALEAHRRTPRQKNPCSSKLSPQSNHHFHSSPYPMFLCISSSSP 236
T PSS P L+ R+PR+K+ S LSP + H S P P S SP
Sbjct: 1314 TRPSSLHGLAPKLQRQYRSPRRKSAGSIPLSPLA--HTPSPPPPTASPQRSPSP 1365
>AL603882-2|CAI16217.1| 1798|Homo sapiens microtubule associated
serine/threonine kinase 2 protein.
Length = 1798
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +3
Query: 75 TSPSSFSS*CPALEAHRRTPRQKNPCSSKLSPQSNHHFHSSPYPMFLCISSSSP 236
T PSS P L+ R+PR+K+ S LSP + H S P P S SP
Sbjct: 1314 TRPSSLHGLAPKLQRQYRSPRRKSAGSIPLSPLA--HTPSPPPPTASPQRSPSP 1365
>AL358075-5|CAI21705.1| 1798|Homo sapiens microtubule associated
serine/threonine kinase 2 protein.
Length = 1798
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +3
Query: 75 TSPSSFSS*CPALEAHRRTPRQKNPCSSKLSPQSNHHFHSSPYPMFLCISSSSP 236
T PSS P L+ R+PR+K+ S LSP + H S P P S SP
Sbjct: 1314 TRPSSLHGLAPKLQRQYRSPRRKSAGSIPLSPLA--HTPSPPPPTASPQRSPSP 1365
>AC005026-1|AAP21869.1| 376|Homo sapiens unknown protein.
Length = 376
Score = 30.7 bits (66), Expect = 6.4
Identities = 23/67 (34%), Positives = 33/67 (49%)
Frame = +3
Query: 75 TSPSSFSS*CPALEAHRRTPRQKNPCSSKLSPQSNHHFHSSPYPMFLCISSSSPSLDLAR 254
TS S S P L R +P +NP ++ SP S H + +PY ++ SSPSL +
Sbjct: 36 TSALSSSPTYPDLPFIRISPH-RNPTAASESPFSPPHPYINPYMDYIRSLHSSPSLSMIS 94
Query: 255 VSVCKSP 275
+ SP
Sbjct: 95 ATRGLSP 101
>AB047005-1|BAB40778.1| 1734|Homo sapiens MAST205 protein.
Length = 1734
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +3
Query: 75 TSPSSFSS*CPALEAHRRTPRQKNPCSSKLSPQSNHHFHSSPYPMFLCISSSSP 236
T PSS P L+ R+PR+K+ S LSP + H S P P S SP
Sbjct: 1314 TRPSSLHGLAPKLQRQYRSPRRKSAGSIPLSPLA--HTPSPPPPTASPQRSPSP 1365
>AB018350-1|BAA34527.2| 1329|Homo sapiens KIAA0807 protein protein.
Length = 1329
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +3
Query: 75 TSPSSFSS*CPALEAHRRTPRQKNPCSSKLSPQSNHHFHSSPYPMFLCISSSSP 236
T PSS P L+ R+PR+K+ S LSP + H S P P S SP
Sbjct: 845 TRPSSLHGLAPKLQRQYRSPRRKSAGSIPLSPLA--HTPSPPPPTASPQRSPSP 896
>Y12473-1|CAA73077.1| 167|Homo sapiens centrin protein.
Length = 167
Score = 30.3 bits (65), Expect = 8.5
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Frame = -3
Query: 264 KQRREPSLG-RENLKKYRETSDTEKNESDDYSE-EIASKNMDSSVVESDGVLQELGIKRR 91
K+RRE S ++ +K E DT+K+E+ DY E ++A + + V ++D VL+ L R
Sbjct: 17 KKRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKAD-VLKILKDYDR 75
Query: 90 TRRGK--FAPFAQVV 52
GK F F +VV
Sbjct: 76 EATGKITFEDFNEVV 90
>CR450346-1|CAG29342.1| 167|Homo sapiens CETN3 protein.
Length = 167
Score = 30.3 bits (65), Expect = 8.5
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Frame = -3
Query: 264 KQRREPSLG-RENLKKYRETSDTEKNESDDYSE-EIASKNMDSSVVESDGVLQELGIKRR 91
K+RRE S ++ +K E DT+K+E+ DY E ++A + + V ++D VL+ L R
Sbjct: 17 KKRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKAD-VLKILKDYDR 75
Query: 90 TRRGK--FAPFAQVV 52
GK F F +VV
Sbjct: 76 EATGKITFEDFNEVV 90
>BT006688-1|AAP35334.1| 167|Homo sapiens centrin, EF-hand protein,
3 (CDC31 homolog, yeast) protein.
Length = 167
Score = 30.3 bits (65), Expect = 8.5
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Frame = -3
Query: 264 KQRREPSLG-RENLKKYRETSDTEKNESDDYSE-EIASKNMDSSVVESDGVLQELGIKRR 91
K+RRE S ++ +K E DT+K+E+ DY E ++A + + V ++D VL+ L R
Sbjct: 17 KKRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKAD-VLKILKDYDR 75
Query: 90 TRRGK--FAPFAQVV 52
GK F F +VV
Sbjct: 76 EATGKITFEDFNEVV 90
>BC112040-1|AAI12041.1| 167|Homo sapiens centrin 3 protein.
Length = 167
Score = 30.3 bits (65), Expect = 8.5
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Frame = -3
Query: 264 KQRREPSLG-RENLKKYRETSDTEKNESDDYSE-EIASKNMDSSVVESDGVLQELGIKRR 91
K+RRE S ++ +K E DT+K+E+ DY E ++A + + V ++D VL+ L R
Sbjct: 17 KKRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKAD-VLKILKDYDR 75
Query: 90 TRRGK--FAPFAQVV 52
GK F F +VV
Sbjct: 76 EATGKITFEDFNEVV 90
>BC109280-1|AAI09281.2| 970|Homo sapiens DNAJC6 protein protein.
Length = 970
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -2
Query: 721 QHVCSWHDISDSLRNQGHGRHHDILP--GEVSFELPPEDTTQHGQ 593
+H C+ D++ S+ H H D L G+ ++PP++ +GQ
Sbjct: 436 EHYCT-KDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNPRHYGQ 479
>BC109279-1|AAI09280.2| 970|Homo sapiens DNAJC6 protein protein.
Length = 970
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -2
Query: 721 QHVCSWHDISDSLRNQGHGRHHDILP--GEVSFELPPEDTTQHGQ 593
+H C+ D++ S+ H H D L G+ ++PP++ +GQ
Sbjct: 436 EHYCT-KDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNPRHYGQ 479
>BC093793-1|AAH93793.1| 167|Homo sapiens centrin, EF-hand protein,
3 (CDC31 homolog, yeast) protein.
Length = 167
Score = 30.3 bits (65), Expect = 8.5
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Frame = -3
Query: 264 KQRREPSLG-RENLKKYRETSDTEKNESDDYSE-EIASKNMDSSVVESDGVLQELGIKRR 91
K+RRE S ++ +K E DT+K+E+ DY E ++A + + V ++D VL+ L R
Sbjct: 17 KKRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKAD-VLKILKDYDR 75
Query: 90 TRRGK--FAPFAQVV 52
GK F F +VV
Sbjct: 76 EATGKITFEDFNEVV 90
>BC051722-1|AAH51722.1| 442|Homo sapiens DNAJC6 protein protein.
Length = 442
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -2
Query: 721 QHVCSWHDISDSLRNQGHGRHHDILP--GEVSFELPPEDTTQHGQ 593
+H C+ D++ S+ H H D L G+ ++PP++ +GQ
Sbjct: 366 EHYCT-KDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNPRHYGQ 409
>BC005383-1|AAH05383.1| 167|Homo sapiens centrin, EF-hand protein,
3 (CDC31 homolog, yeast) protein.
Length = 167
Score = 30.3 bits (65), Expect = 8.5
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Frame = -3
Query: 264 KQRREPSLG-RENLKKYRETSDTEKNESDDYSE-EIASKNMDSSVVESDGVLQELGIKRR 91
K+RRE S ++ +K E DT+K+E+ DY E ++A + + V ++D VL+ L R
Sbjct: 17 KKRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKAD-VLKILKDYDR 75
Query: 90 TRRGK--FAPFAQVV 52
GK F F +VV
Sbjct: 76 EATGKITFEDFNEVV 90
>AL355487-2|CAI23548.1| 970|Homo sapiens DnaJ (Hsp40) homolog,
subfamily C, member 6 protein.
Length = 970
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -2
Query: 721 QHVCSWHDISDSLRNQGHGRHHDILP--GEVSFELPPEDTTQHGQ 593
+H C+ D++ S+ H H D L G+ ++PP++ +GQ
Sbjct: 436 EHYCT-KDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNPRHYGQ 479
>AL355487-1|CAI23547.1| 913|Homo sapiens DnaJ (Hsp40) homolog,
subfamily C, member 6 protein.
Length = 913
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -2
Query: 721 QHVCSWHDISDSLRNQGHGRHHDILP--GEVSFELPPEDTTQHGQ 593
+H C+ D++ S+ H H D L G+ ++PP++ +GQ
Sbjct: 379 EHYCT-KDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNPRHYGQ 422
>AL139294-3|CAI18999.1| 970|Homo sapiens DnaJ (Hsp40) homolog,
subfamily C, member 6 protein.
Length = 970
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -2
Query: 721 QHVCSWHDISDSLRNQGHGRHHDILP--GEVSFELPPEDTTQHGQ 593
+H C+ D++ S+ H H D L G+ ++PP++ +GQ
Sbjct: 436 EHYCT-KDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNPRHYGQ 479
>AL139294-1|CAI18997.1| 913|Homo sapiens DnaJ (Hsp40) homolog,
subfamily C, member 6 protein.
Length = 913
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -2
Query: 721 QHVCSWHDISDSLRNQGHGRHHDILP--GEVSFELPPEDTTQHGQ 593
+H C+ D++ S+ H H D L G+ ++PP++ +GQ
Sbjct: 379 EHYCT-KDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNPRHYGQ 422
>AK122582-1|BAC56923.1| 1383|Homo sapiens FLJ00269 protein protein.
Length = 1383
Score = 30.3 bits (65), Expect = 8.5
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = +3
Query: 153 SSKLSPQSNHH-FHSSPYPMFLCISSSS---PSLDLA-RVSVCKSPGIRTSGGPSADTS 314
S LSP + HH SS P+ S P+ LA C SPG++ G PSA +S
Sbjct: 840 SYSLSPGNRHHPVFSSSDPLEKAFKGSGHWLPAAGLAGNRGGCGSPGLQCKGAPSASSS 898
>AB007942-1|BAA32318.2| 937|Homo sapiens KIAA0473 protein protein.
Length = 937
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -2
Query: 721 QHVCSWHDISDSLRNQGHGRHHDILP--GEVSFELPPEDTTQHGQ 593
+H C+ D++ S+ H H D L G+ ++PP++ +GQ
Sbjct: 403 EHYCT-KDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNPRHYGQ 446
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,861,084
Number of Sequences: 237096
Number of extensions: 2997629
Number of successful extensions: 11321
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 10030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11292
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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