Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11j21
(830 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC093007-1|AAH93007.1| 406|Homo sapiens COP9 constitutive photo... 437 e-122
BC009292-1|AAH09292.1| 406|Homo sapiens COP9 constitutive photo... 437 e-122
BC004302-1|AAH04302.1| 406|Homo sapiens COP9 constitutive photo... 437 e-122
AK001210-1|BAA91555.1| 394|Homo sapiens protein ( Homo sapiens ... 437 e-122
AF100757-1|AAD43021.1| 405|Homo sapiens COP9 complex subunit 4 ... 437 e-122
AK223178-1|BAD96898.1| 406|Homo sapiens COP9 signalosome subuni... 435 e-122
AL356125-1|CAI16919.1| 469|Homo sapiens protein ( Human DNA seq... 31 6.8
AL117345-2|CAI20512.1| 469|Homo sapiens protein ( Human DNA seq... 31 6.8
U67243-1|AAB61898.1| 357|Homo sapiens sorbitol dehydrogenase pr... 30 8.9
U07361-1|AAA66064.1| 357|Homo sapiens sorbitol dehydrogenase pr... 30 8.9
L29254-1|AAA80566.1| 357|Homo sapiens L-iditol-2 dehydrogenase ... 30 8.9
L29008-1|AAA80565.1| 357|Homo sapiens L-iditol-2 dehydrogenase ... 30 8.9
BC025295-1|AAH25295.1| 357|Homo sapiens sorbitol dehydrogenase ... 30 8.9
BC021085-1|AAH21085.1| 357|Homo sapiens sorbitol dehydrogenase ... 30 8.9
>BC093007-1|AAH93007.1| 406|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 4 (Arabidopsis)
protein.
Length = 406
Score = 437 bits (1076), Expect = e-122
Identities = 207/262 (79%), Positives = 233/262 (88%)
Frame = -2
Query: 790 LETYLKIARLYLEVDDPVQAEAFVNRASLLQAETTNEQLQIYYKVCYARVLDYRRKFIEA 611
LETYLKIARLYLE DDPVQAEA++NRASLLQ E+TNEQLQI+YKVCYARVLDYRRKFIEA
Sbjct: 145 LETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEA 204
Query: 610 AQRYNELSYRNIIHEDERMTCLRNALICTVLASAGQQRSRMLATLFKDERCQQLPAYSIL 431
AQRYNELSY+ I+HE ER+ L++AL CT+LASAGQQRSRMLATLFKDERCQQL AY IL
Sbjct: 205 AQRYNELSYKTIVHESERLEALKHALHCTILASAGQQRSRMLATLFKDERCQQLAAYGIL 264
Query: 430 EKMYLDRIIRRSELQEFESLMQTHQKATTPDGSTILDRAVFEHNLLSASKLYNNITFEEL 251
EKMYLDRIIR ++LQEF +++ HQKATT DGS+ILDRAV EHNLLSASKLYNNITFEEL
Sbjct: 265 EKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEEL 324
Query: 250 GALLETPPAKAERIASHMISEGRMNGYIDQISSIVHFETREILPQWDKQIQSLCYQVNSL 71
GALLE P AKAE+IAS MI+EGRMNG+IDQI IVHFETRE LP WDKQIQSLC+QVN+L
Sbjct: 325 GALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFETREALPTWDKQIQSLCFQVNNL 384
Query: 70 IEKIASAEPEWMAKVVEEEMIQ 5
+EKI+ PEW A+ +E +M Q
Sbjct: 385 LEKISQTAPEWTAQAMEAQMAQ 406
>BC009292-1|AAH09292.1| 406|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 4 (Arabidopsis)
protein.
Length = 406
Score = 437 bits (1076), Expect = e-122
Identities = 207/262 (79%), Positives = 233/262 (88%)
Frame = -2
Query: 790 LETYLKIARLYLEVDDPVQAEAFVNRASLLQAETTNEQLQIYYKVCYARVLDYRRKFIEA 611
LETYLKIARLYLE DDPVQAEA++NRASLLQ E+TNEQLQI+YKVCYARVLDYRRKFIEA
Sbjct: 145 LETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEA 204
Query: 610 AQRYNELSYRNIIHEDERMTCLRNALICTVLASAGQQRSRMLATLFKDERCQQLPAYSIL 431
AQRYNELSY+ I+HE ER+ L++AL CT+LASAGQQRSRMLATLFKDERCQQL AY IL
Sbjct: 205 AQRYNELSYKTIVHESERLEALKHALHCTILASAGQQRSRMLATLFKDERCQQLAAYGIL 264
Query: 430 EKMYLDRIIRRSELQEFESLMQTHQKATTPDGSTILDRAVFEHNLLSASKLYNNITFEEL 251
EKMYLDRIIR ++LQEF +++ HQKATT DGS+ILDRAV EHNLLSASKLYNNITFEEL
Sbjct: 265 EKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEEL 324
Query: 250 GALLETPPAKAERIASHMISEGRMNGYIDQISSIVHFETREILPQWDKQIQSLCYQVNSL 71
GALLE P AKAE+IAS MI+EGRMNG+IDQI IVHFETRE LP WDKQIQSLC+QVN+L
Sbjct: 325 GALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFETREALPTWDKQIQSLCFQVNNL 384
Query: 70 IEKIASAEPEWMAKVVEEEMIQ 5
+EKI+ PEW A+ +E +M Q
Sbjct: 385 LEKISQTAPEWTAQAMEAQMAQ 406
>BC004302-1|AAH04302.1| 406|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 4 (Arabidopsis)
protein.
Length = 406
Score = 437 bits (1076), Expect = e-122
Identities = 207/262 (79%), Positives = 233/262 (88%)
Frame = -2
Query: 790 LETYLKIARLYLEVDDPVQAEAFVNRASLLQAETTNEQLQIYYKVCYARVLDYRRKFIEA 611
LETYLKIARLYLE DDPVQAEA++NRASLLQ E+TNEQLQI+YKVCYARVLDYRRKFIEA
Sbjct: 145 LETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEA 204
Query: 610 AQRYNELSYRNIIHEDERMTCLRNALICTVLASAGQQRSRMLATLFKDERCQQLPAYSIL 431
AQRYNELSY+ I+HE ER+ L++AL CT+LASAGQQRSRMLATLFKDERCQQL AY IL
Sbjct: 205 AQRYNELSYKTIVHESERLEALKHALHCTILASAGQQRSRMLATLFKDERCQQLAAYGIL 264
Query: 430 EKMYLDRIIRRSELQEFESLMQTHQKATTPDGSTILDRAVFEHNLLSASKLYNNITFEEL 251
EKMYLDRIIR ++LQEF +++ HQKATT DGS+ILDRAV EHNLLSASKLYNNITFEEL
Sbjct: 265 EKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEEL 324
Query: 250 GALLETPPAKAERIASHMISEGRMNGYIDQISSIVHFETREILPQWDKQIQSLCYQVNSL 71
GALLE P AKAE+IAS MI+EGRMNG+IDQI IVHFETRE LP WDKQIQSLC+QVN+L
Sbjct: 325 GALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFETREALPTWDKQIQSLCFQVNNL 384
Query: 70 IEKIASAEPEWMAKVVEEEMIQ 5
+EKI+ PEW A+ +E +M Q
Sbjct: 385 LEKISQTAPEWTAQAMEAQMAQ 406
>AK001210-1|BAA91555.1| 394|Homo sapiens protein ( Homo sapiens
cDNA FLJ10348 fis, clone NT2RM2001065. ).
Length = 394
Score = 437 bits (1076), Expect = e-122
Identities = 207/262 (79%), Positives = 233/262 (88%)
Frame = -2
Query: 790 LETYLKIARLYLEVDDPVQAEAFVNRASLLQAETTNEQLQIYYKVCYARVLDYRRKFIEA 611
LETYLKIARLYLE DDPVQAEA++NRASLLQ E+TNEQLQI+YKVCYARVLDYRRKFIEA
Sbjct: 133 LETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEA 192
Query: 610 AQRYNELSYRNIIHEDERMTCLRNALICTVLASAGQQRSRMLATLFKDERCQQLPAYSIL 431
AQRYNELSY+ I+HE ER+ L++AL CT+LASAGQQRSRMLATLFKDERCQQL AY IL
Sbjct: 193 AQRYNELSYKTIVHESERLEALKHALHCTILASAGQQRSRMLATLFKDERCQQLAAYGIL 252
Query: 430 EKMYLDRIIRRSELQEFESLMQTHQKATTPDGSTILDRAVFEHNLLSASKLYNNITFEEL 251
EKMYLDRIIR ++LQEF +++ HQKATT DGS+ILDRAV EHNLLSASKLYNNITFEEL
Sbjct: 253 EKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEEL 312
Query: 250 GALLETPPAKAERIASHMISEGRMNGYIDQISSIVHFETREILPQWDKQIQSLCYQVNSL 71
GALLE P AKAE+IAS MI+EGRMNG+IDQI IVHFETRE LP WDKQIQSLC+QVN+L
Sbjct: 313 GALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFETREALPTWDKQIQSLCFQVNNL 372
Query: 70 IEKIASAEPEWMAKVVEEEMIQ 5
+EKI+ PEW A+ +E +M Q
Sbjct: 373 LEKISQTAPEWTAQAMEAQMAQ 394
>AF100757-1|AAD43021.1| 405|Homo sapiens COP9 complex subunit 4
protein.
Length = 405
Score = 437 bits (1076), Expect = e-122
Identities = 207/262 (79%), Positives = 233/262 (88%)
Frame = -2
Query: 790 LETYLKIARLYLEVDDPVQAEAFVNRASLLQAETTNEQLQIYYKVCYARVLDYRRKFIEA 611
LETYLKIARLYLE DDPVQAEA++NRASLLQ E+TNEQLQI+YKVCYARVLDYRRKFIEA
Sbjct: 144 LETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEA 203
Query: 610 AQRYNELSYRNIIHEDERMTCLRNALICTVLASAGQQRSRMLATLFKDERCQQLPAYSIL 431
AQRYNELSY+ I+HE ER+ L++AL CT+LASAGQQRSRMLATLFKDERCQQL AY IL
Sbjct: 204 AQRYNELSYKTIVHESERLEALKHALHCTILASAGQQRSRMLATLFKDERCQQLAAYGIL 263
Query: 430 EKMYLDRIIRRSELQEFESLMQTHQKATTPDGSTILDRAVFEHNLLSASKLYNNITFEEL 251
EKMYLDRIIR ++LQEF +++ HQKATT DGS+ILDRAV EHNLLSASKLYNNITFEEL
Sbjct: 264 EKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEEL 323
Query: 250 GALLETPPAKAERIASHMISEGRMNGYIDQISSIVHFETREILPQWDKQIQSLCYQVNSL 71
GALLE P AKAE+IAS MI+EGRMNG+IDQI IVHFETRE LP WDKQIQSLC+QVN+L
Sbjct: 324 GALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFETREALPTWDKQIQSLCFQVNNL 383
Query: 70 IEKIASAEPEWMAKVVEEEMIQ 5
+EKI+ PEW A+ +E +M Q
Sbjct: 384 LEKISQTAPEWTAQAMEAQMAQ 405
>AK223178-1|BAD96898.1| 406|Homo sapiens COP9 signalosome subunit 4
variant protein.
Length = 406
Score = 435 bits (1072), Expect = e-122
Identities = 206/262 (78%), Positives = 233/262 (88%)
Frame = -2
Query: 790 LETYLKIARLYLEVDDPVQAEAFVNRASLLQAETTNEQLQIYYKVCYARVLDYRRKFIEA 611
LETYLKIARLYLE DDPVQAEA++NRASLLQ E+TNEQLQI+YKVCYARVLDYRRKFIEA
Sbjct: 145 LETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEA 204
Query: 610 AQRYNELSYRNIIHEDERMTCLRNALICTVLASAGQQRSRMLATLFKDERCQQLPAYSIL 431
AQRYNELSY+ I+HE +R+ L++AL CT+LASAGQQRSRMLATLFKDERCQQL AY IL
Sbjct: 205 AQRYNELSYKTIVHESKRLEALKHALHCTILASAGQQRSRMLATLFKDERCQQLAAYGIL 264
Query: 430 EKMYLDRIIRRSELQEFESLMQTHQKATTPDGSTILDRAVFEHNLLSASKLYNNITFEEL 251
EKMYLDRIIR ++LQEF +++ HQKATT DGS+ILDRAV EHNLLSASKLYNNITFEEL
Sbjct: 265 EKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEEL 324
Query: 250 GALLETPPAKAERIASHMISEGRMNGYIDQISSIVHFETREILPQWDKQIQSLCYQVNSL 71
GALLE P AKAE+IAS MI+EGRMNG+IDQI IVHFETRE LP WDKQIQSLC+QVN+L
Sbjct: 325 GALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFETREALPTWDKQIQSLCFQVNNL 384
Query: 70 IEKIASAEPEWMAKVVEEEMIQ 5
+EKI+ PEW A+ +E +M Q
Sbjct: 385 LEKISQTAPEWTAQAMEAQMAQ 406
>AL356125-1|CAI16919.1| 469|Homo sapiens protein ( Human DNA
sequence from clone RP11-85G2 on chromosome 6 Contains
part of a novel gene. ).
Length = 469
Score = 30.7 bits (66), Expect = 6.8
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = -2
Query: 247 ALLETPPAKAERIASHMISEGRMNGYIDQISSIVHFETREILPQWDKQIQSLCYQV-NSL 71
ALL++ ++E H+I E R+ ++ V + EIL +WD +IQ+L ++ +L
Sbjct: 364 ALLQSAKERSESSEKHIIDENRLT-----LTEKVEKKRCEILSKWD-EIQALEKEIKTTL 417
Query: 70 IEKIASAEPEWMAKVVEEEMIQ 5
+ S E K +E E IQ
Sbjct: 418 VHTGISDITENRIKSIEHEAIQ 439
>AL117345-2|CAI20512.1| 469|Homo sapiens protein ( Human DNA
sequence from clone RP3-416F21 on chromosome 6q26-27
Contains the 3' end of the PDE10A gene for
phosphodiesterase 10A and31. ).
Length = 469
Score = 30.7 bits (66), Expect = 6.8
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = -2
Query: 247 ALLETPPAKAERIASHMISEGRMNGYIDQISSIVHFETREILPQWDKQIQSLCYQV-NSL 71
ALL++ ++E H+I E R+ ++ V + EIL +WD +IQ+L ++ +L
Sbjct: 364 ALLQSAKERSESSEKHIIDENRLT-----LTEKVEKKRCEILSKWD-EIQALEKEIKTTL 417
Query: 70 IEKIASAEPEWMAKVVEEEMIQ 5
+ S E K +E E IQ
Sbjct: 418 VHTGISDITENRIKSIEHEAIQ 439
>U67243-1|AAB61898.1| 357|Homo sapiens sorbitol dehydrogenase
protein.
Length = 357
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -2
Query: 352 ATTPDGSTILDRAVFEHNLLSASKLYNNITFEELGALLE 236
AT PD + ++HN KL +N+TFEE GAL+E
Sbjct: 121 ATPPDDGNLC--RFYKHNAAFCYKLPDNVTFEE-GALIE 156
>U07361-1|AAA66064.1| 357|Homo sapiens sorbitol dehydrogenase
protein.
Length = 357
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -2
Query: 352 ATTPDGSTILDRAVFEHNLLSASKLYNNITFEELGALLE 236
AT PD + ++HN KL +N+TFEE GAL+E
Sbjct: 121 ATPPDDGNLC--RFYKHNAAFCYKLPDNVTFEE-GALIE 156
>L29254-1|AAA80566.1| 357|Homo sapiens L-iditol-2 dehydrogenase
protein.
Length = 357
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -2
Query: 352 ATTPDGSTILDRAVFEHNLLSASKLYNNITFEELGALLE 236
AT PD + ++HN KL +N+TFEE GAL+E
Sbjct: 121 ATPPDDGNLC--RFYKHNAAFCYKLPDNVTFEE-GALIE 156
>L29008-1|AAA80565.1| 357|Homo sapiens L-iditol-2 dehydrogenase
protein.
Length = 357
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -2
Query: 352 ATTPDGSTILDRAVFEHNLLSASKLYNNITFEELGALLE 236
AT PD + ++HN KL +N+TFEE GAL+E
Sbjct: 121 ATPPDDGNLC--RFYKHNAAFCYKLPDNVTFEE-GALIE 156
>BC025295-1|AAH25295.1| 357|Homo sapiens sorbitol dehydrogenase
protein.
Length = 357
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -2
Query: 352 ATTPDGSTILDRAVFEHNLLSASKLYNNITFEELGALLE 236
AT PD + ++HN KL +N+TFEE GAL+E
Sbjct: 121 ATPPDDGNLC--RFYKHNAAFCYKLPDNVTFEE-GALIE 156
>BC021085-1|AAH21085.1| 357|Homo sapiens sorbitol dehydrogenase
protein.
Length = 357
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -2
Query: 352 ATTPDGSTILDRAVFEHNLLSASKLYNNITFEELGALLE 236
AT PD + ++HN KL +N+TFEE GAL+E
Sbjct: 121 ATPPDDGNLC--RFYKHNAAFCYKLPDNVTFEE-GALIE 156
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,980,905
Number of Sequences: 237096
Number of extensions: 2524145
Number of successful extensions: 5407
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5407
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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