Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11j15
(791 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07315-1|CAA30278.1| 127|Homo sapiens protein ( Human gene for ... 79 2e-14
U43939-1|AAA85905.1| 127|Homo sapiens nuclear transport factor ... 79 2e-14
CR456937-1|CAG33218.1| 127|Homo sapiens NUTF2 protein. 79 2e-14
BC002348-1|AAH02348.1| 127|Homo sapiens nuclear transport facto... 79 2e-14
BC011731-1|AAH11731.1| 449|Homo sapiens GTPase activating prote... 48 3e-05
AF145284-1|AAD51932.1| 482|Homo sapiens RNA-binding protein iso... 48 3e-05
AF053535-1|AAC95292.1| 449|Homo sapiens ras-GAP/RNA binding pro... 48 3e-05
AF051311-1|AAC15705.1| 449|Homo sapiens Ras-GAP SH3 binding pro... 48 3e-05
AB014560-1|BAA31635.2| 490|Homo sapiens KIAA0660 protein protein. 48 3e-05
CR536535-1|CAG38772.1| 466|Homo sapiens G3BP protein. 48 5e-05
U32519-1|AAB07787.1| 466|Homo sapiens GAP SH3 binding protein p... 46 2e-04
BT019384-1|AAV38191.1| 466|Homo sapiens Ras-GTPase-activating p... 46 2e-04
BC108278-1|AAI08279.1| 466|Homo sapiens GTPase activating prote... 46 2e-04
BC006997-1|AAH06997.1| 466|Homo sapiens GTPase activating prote... 46 2e-04
AK222606-1|BAD96326.1| 466|Homo sapiens Ras-GTPase-activating p... 46 2e-04
>X07315-1|CAA30278.1| 127|Homo sapiens protein ( Human gene for
PP15 (placental protein 15). ).
Length = 127
Score = 79.0 bits (186), Expect = 2e-14
Identities = 39/84 (46%), Positives = 54/84 (64%)
Frame = -2
Query: 775 EGVQLQGAVKIMEKLNSLTFQKITRIVTAVDSQPMFDGGVXINVLGRLKCDEDPPHLYMQ 596
EG Q QG I+EKL+SL FQKI +TA D QP D + V+G+LK DEDP + Q
Sbjct: 42 EGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQ 101
Query: 595 TFVLKPLGDSFYVQHDIFRLGIHD 524
F+LK + D++ +D+FRL +H+
Sbjct: 102 MFLLKNINDAWVCTNDMFRLALHN 125
>U43939-1|AAA85905.1| 127|Homo sapiens nuclear transport factor 2
protein.
Length = 127
Score = 79.0 bits (186), Expect = 2e-14
Identities = 39/84 (46%), Positives = 54/84 (64%)
Frame = -2
Query: 775 EGVQLQGAVKIMEKLNSLTFQKITRIVTAVDSQPMFDGGVXINVLGRLKCDEDPPHLYMQ 596
EG Q QG I+EKL+SL FQKI +TA D QP D + V+G+LK DEDP + Q
Sbjct: 42 EGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQ 101
Query: 595 TFVLKPLGDSFYVQHDIFRLGIHD 524
F+LK + D++ +D+FRL +H+
Sbjct: 102 MFLLKNINDAWVCTNDMFRLALHN 125
>CR456937-1|CAG33218.1| 127|Homo sapiens NUTF2 protein.
Length = 127
Score = 79.0 bits (186), Expect = 2e-14
Identities = 39/84 (46%), Positives = 54/84 (64%)
Frame = -2
Query: 775 EGVQLQGAVKIMEKLNSLTFQKITRIVTAVDSQPMFDGGVXINVLGRLKCDEDPPHLYMQ 596
EG Q QG I+EKL+SL FQKI +TA D QP D + V+G+LK DEDP + Q
Sbjct: 42 EGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQ 101
Query: 595 TFVLKPLGDSFYVQHDIFRLGIHD 524
F+LK + D++ +D+FRL +H+
Sbjct: 102 MFLLKNINDAWVCTNDMFRLALHN 125
>BC002348-1|AAH02348.1| 127|Homo sapiens nuclear transport factor 2
protein.
Length = 127
Score = 79.0 bits (186), Expect = 2e-14
Identities = 39/84 (46%), Positives = 54/84 (64%)
Frame = -2
Query: 775 EGVQLQGAVKIMEKLNSLTFQKITRIVTAVDSQPMFDGGVXINVLGRLKCDEDPPHLYMQ 596
EG Q QG I+EKL+SL FQKI +TA D QP D + V+G+LK DEDP + Q
Sbjct: 42 EGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQ 101
Query: 595 TFVLKPLGDSFYVQHDIFRLGIHD 524
F+LK + D++ +D+FRL +H+
Sbjct: 102 MFLLKNINDAWVCTNDMFRLALHN 125
>BC011731-1|AAH11731.1| 449|Homo sapiens GTPase activating protein
(SH3 domain) binding protein 2 protein.
Length = 449
Score = 48.4 bits (110), Expect = 3e-05
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -2
Query: 757 GAVKIMEKLNSLTFQKITRIVTAVDSQPMFDGGVXINVLGRLKCDEDPPHLYMQTFVLKP 578
G I K+ SL F + + VD+ GV + V+G L P +MQTFVL P
Sbjct: 57 GQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAP 116
Query: 577 LG---DSFYVQHDIFR 539
G + FYV +D+FR
Sbjct: 117 EGSVPNKFYVHNDMFR 132
>AF145284-1|AAD51932.1| 482|Homo sapiens RNA-binding protein
isoform G3BP-2a protein.
Length = 482
Score = 48.4 bits (110), Expect = 3e-05
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -2
Query: 757 GAVKIMEKLNSLTFQKITRIVTAVDSQPMFDGGVXINVLGRLKCDEDPPHLYMQTFVLKP 578
G I K+ SL F + + VD+ GV + V+G L P +MQTFVL P
Sbjct: 57 GQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAP 116
Query: 577 LG---DSFYVQHDIFR 539
G + FYV +D+FR
Sbjct: 117 EGSVPNKFYVHNDMFR 132
>AF053535-1|AAC95292.1| 449|Homo sapiens ras-GAP/RNA binding
protein G3BP2 protein.
Length = 449
Score = 48.4 bits (110), Expect = 3e-05
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -2
Query: 757 GAVKIMEKLNSLTFQKITRIVTAVDSQPMFDGGVXINVLGRLKCDEDPPHLYMQTFVLKP 578
G I K+ SL F + + VD+ GV + V+G L P +MQTFVL P
Sbjct: 57 GQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAP 116
Query: 577 LG---DSFYVQHDIFR 539
G + FYV +D+FR
Sbjct: 117 EGSVPNKFYVHNDMFR 132
>AF051311-1|AAC15705.1| 449|Homo sapiens Ras-GAP SH3 binding
protein protein.
Length = 449
Score = 48.4 bits (110), Expect = 3e-05
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -2
Query: 757 GAVKIMEKLNSLTFQKITRIVTAVDSQPMFDGGVXINVLGRLKCDEDPPHLYMQTFVLKP 578
G I K+ SL F + + VD+ GV + V+G L P +MQTFVL P
Sbjct: 57 GQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAP 116
Query: 577 LG---DSFYVQHDIFR 539
G + FYV +D+FR
Sbjct: 117 EGSVPNKFYVHNDMFR 132
>AB014560-1|BAA31635.2| 490|Homo sapiens KIAA0660 protein protein.
Length = 490
Score = 48.4 bits (110), Expect = 3e-05
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -2
Query: 757 GAVKIMEKLNSLTFQKITRIVTAVDSQPMFDGGVXINVLGRLKCDEDPPHLYMQTFVLKP 578
G I K+ SL F + + VD+ GV + V+G L P +MQTFVL P
Sbjct: 65 GQNDIHHKVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAP 124
Query: 577 LG---DSFYVQHDIFR 539
G + FYV +D+FR
Sbjct: 125 EGSVPNKFYVHNDMFR 140
>CR536535-1|CAG38772.1| 466|Homo sapiens G3BP protein.
Length = 466
Score = 47.6 bits (108), Expect = 5e-05
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -2
Query: 757 GAVKIMEKLNSLTFQKITRIVTAVDSQPMFDGGVXINVLGRLKCDEDPPHLYMQTFVLKP 578
G +I K+ S F + VD+ + GV + V+G L D +MQTFVL P
Sbjct: 57 GQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNDNQALRRFMQTFVLAP 116
Query: 577 LG---DSFYVQHDIFR 539
G + FYV +DIFR
Sbjct: 117 EGSVANKFYVHNDIFR 132
>U32519-1|AAB07787.1| 466|Homo sapiens GAP SH3 binding protein
protein.
Length = 466
Score = 45.6 bits (103), Expect = 2e-04
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -2
Query: 757 GAVKIMEKLNSLTFQKITRIVTAVDSQPMFDGGVXINVLGRLKCDEDPPHLYMQTFVLKP 578
G +I K+ S F + VD+ + GV + V+G L + +MQTFVL P
Sbjct: 57 GQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAP 116
Query: 577 LG---DSFYVQHDIFR 539
G + FYV +DIFR
Sbjct: 117 EGSVANKFYVHNDIFR 132
>BT019384-1|AAV38191.1| 466|Homo sapiens Ras-GTPase-activating
protein SH3-domain-binding protein protein.
Length = 466
Score = 45.6 bits (103), Expect = 2e-04
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -2
Query: 757 GAVKIMEKLNSLTFQKITRIVTAVDSQPMFDGGVXINVLGRLKCDEDPPHLYMQTFVLKP 578
G +I K+ S F + VD+ + GV + V+G L + +MQTFVL P
Sbjct: 57 GQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAP 116
Query: 577 LG---DSFYVQHDIFR 539
G + FYV +DIFR
Sbjct: 117 EGSVANKFYVHNDIFR 132
>BC108278-1|AAI08279.1| 466|Homo sapiens GTPase activating protein
(SH3 domain) binding protein 1 protein.
Length = 466
Score = 45.6 bits (103), Expect = 2e-04
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -2
Query: 757 GAVKIMEKLNSLTFQKITRIVTAVDSQPMFDGGVXINVLGRLKCDEDPPHLYMQTFVLKP 578
G +I K+ S F + VD+ + GV + V+G L + +MQTFVL P
Sbjct: 57 GQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAP 116
Query: 577 LG---DSFYVQHDIFR 539
G + FYV +DIFR
Sbjct: 117 EGSVANKFYVHNDIFR 132
>BC006997-1|AAH06997.1| 466|Homo sapiens GTPase activating protein
(SH3 domain) binding protein 1 protein.
Length = 466
Score = 45.6 bits (103), Expect = 2e-04
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -2
Query: 757 GAVKIMEKLNSLTFQKITRIVTAVDSQPMFDGGVXINVLGRLKCDEDPPHLYMQTFVLKP 578
G +I K+ S F + VD+ + GV + V+G L + +MQTFVL P
Sbjct: 57 GQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAP 116
Query: 577 LG---DSFYVQHDIFR 539
G + FYV +DIFR
Sbjct: 117 EGSVANKFYVHNDIFR 132
>AK222606-1|BAD96326.1| 466|Homo sapiens Ras-GTPase-activating
protein SH3-domain-binding protein variant protein.
Length = 466
Score = 45.6 bits (103), Expect = 2e-04
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -2
Query: 757 GAVKIMEKLNSLTFQKITRIVTAVDSQPMFDGGVXINVLGRLKCDEDPPHLYMQTFVLKP 578
G +I K+ S F + VD+ + GV + V+G L + +MQTFVL P
Sbjct: 57 GQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAP 116
Query: 577 LG---DSFYVQHDIFR 539
G + FYV +DIFR
Sbjct: 117 EGSVANKFYVHNDIFR 132
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,168,707
Number of Sequences: 237096
Number of extensions: 2155307
Number of successful extensions: 2974
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2968
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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