Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11j11
(821 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456483-1|CAG30369.1| 469|Homo sapiens dJ796I17.2 protein. 214 4e-55
AY189688-1|AAO85221.1| 469|Homo sapiens transformation-related ... 214 4e-55
AL035398-2|CAB51401.1| 469|Homo sapiens protein ( Human DNA seq... 214 4e-55
AK222657-1|BAD96377.1| 469|Homo sapiens CGI-51 protein variant ... 214 4e-55
BC015200-1|AAH15200.1| 469|Homo sapiens sorting and assembly ma... 213 5e-55
BC011681-1|AAH11681.1| 469|Homo sapiens sorting and assembly ma... 213 5e-55
AK001087-1|BAA91498.1| 469|Homo sapiens protein ( Homo sapiens ... 213 5e-55
BC007830-1|AAH07830.1| 468|Homo sapiens sorting and assembly ma... 209 1e-53
AF151809-1|AAD34046.1| 469|Homo sapiens CGI-51 protein protein. 202 9e-52
Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein. 35 0.31
U63610-1|AAB05428.1| 4574|Homo sapiens plectin protein. 35 0.31
U53204-1|AAB05427.1| 4574|Homo sapiens plectin protein. 35 0.31
AY480051-1|AAR95684.1| 4547|Homo sapiens plectin 11 protein. 35 0.31
AY480050-1|AAR95683.1| 4551|Homo sapiens plectin 10 protein. 35 0.31
AY480049-1|AAR95682.1| 4547|Homo sapiens plectin 8 protein. 35 0.31
AY480048-1|AAR95681.1| 4515|Homo sapiens plectin 7 protein. 35 0.31
AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein. 35 0.31
AY480046-1|AAR95679.1| 4525|Homo sapiens plectin 3 protein. 35 0.31
AY480045-1|AAR95678.1| 4533|Homo sapiens plectin 2 protein. 35 0.31
AY480044-1|AAR95677.1| 4574|Homo sapiens plectin 1 protein. 35 0.31
Y13374-1|CAA73804.1| 209|Homo sapiens putative prenylated prote... 34 0.71
D88756-1|BAB46920.1| 209|Homo sapiens cerebral protein-5 protein. 34 0.71
CR456853-1|CAG33134.1| 209|Homo sapiens CXX1 protein. 34 0.71
BC002410-1|AAH02410.3| 209|Homo sapiens family with sequence si... 34 0.71
BC002385-1|AAH02385.3| 209|Homo sapiens family with sequence si... 34 0.71
AF052096-1|AAC28618.1| 209|Homo sapiens putative prenylated pro... 34 0.71
AF038168-1|AAB97361.1| 209|Homo sapiens putative prenylated pro... 34 0.71
BC111771-1|AAI11772.1| 838|Homo sapiens transforming, acidic co... 33 1.6
AJ243997-1|CAB53009.1| 838|Homo sapiens ERIC1 protein. 33 1.6
BC106071-1|AAI06072.1| 838|Homo sapiens transforming, acidic co... 31 3.8
AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein pr... 31 3.8
AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated pr... 31 3.8
AF093543-1|AAD25964.1| 838|Homo sapiens transforming acidic coi... 31 3.8
AB029019-1|BAA83048.2| 1919|Homo sapiens KIAA1096 protein protein. 31 3.8
AJ311904-1|CAC84565.1| 1207|Homo sapiens ADAMTS-19 protein. 30 8.8
>CR456483-1|CAG30369.1| 469|Homo sapiens dJ796I17.2 protein.
Length = 469
Score = 214 bits (522), Expect = 4e-55
Identities = 107/248 (43%), Positives = 150/248 (60%), Gaps = 7/248 (2%)
Frame = -1
Query: 803 TKHNLQWEGLVRETAAXSKTTSFKVRESSGPQMKSILRHIVTVDHRDDAIFPSQGSWVQF 624
T H ++WEG+ RE S+T SF VR+ SG +KS L H + +D R+ +I P +G+ ++
Sbjct: 222 TSHTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALLKV 281
Query: 623 SSELAGL-GGGVAHLKTELQAQQNYELIEDIVLQLAGAAGVLHDMFG--TEIPDHFFLGG 453
+ ELAG GG V+ +K + + Q N +LI D V + G+L + + I D F+LGG
Sbjct: 282 NQELAGYTGGDVSFIKEDFELQLNKQLIFDSVFSASFWGGMLVPIGDKPSSIADRFYLGG 341
Query: 452 PTTLRGFQQRGVGPHSDGQATGGKVYWAAGAHVYAPLPFLRNKNGISSLFRSHFFVNAGC 273
PT++RGF +GP S+G GG+ YWA G H+Y PLPF + G LFR+HFF+NAG
Sbjct: 342 PTSIRGFSMHSIGPQSEGDYLGGEAYWAGGLHLYTPLPFRPGQGGFGELFRTHFFLNAGN 401
Query: 272 LAAPDNG----LTNWEWANSARVSCGAGVALRLGSVARLELNYCAPLKARTNDCTAHGLQ 105
L + G + A R S GAG+ LRLG++ARLELNYC P+ +T D G+Q
Sbjct: 402 LCNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCVPMGVQTGDRICDGVQ 461
Query: 104 FGLGVHFL 81
FG G+ FL
Sbjct: 462 FGAGIRFL 469
>AY189688-1|AAO85221.1| 469|Homo sapiens transformation-related
protein 3 protein.
Length = 469
Score = 214 bits (522), Expect = 4e-55
Identities = 107/248 (43%), Positives = 150/248 (60%), Gaps = 7/248 (2%)
Frame = -1
Query: 803 TKHNLQWEGLVRETAAXSKTTSFKVRESSGPQMKSILRHIVTVDHRDDAIFPSQGSWVQF 624
T H ++WEG+ RE S+T SF VR+ SG +KS L H + +D R+ +I P +G+ ++
Sbjct: 222 TSHTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALLKV 281
Query: 623 SSELAGL-GGGVAHLKTELQAQQNYELIEDIVLQLAGAAGVLHDMFG--TEIPDHFFLGG 453
+ ELAG GG V+ +K + + Q N +LI D V + G+L + + I D F+LGG
Sbjct: 282 NQELAGYTGGDVSFIKEDFELQLNKQLIFDSVFSASFWGGMLVPIGDKPSSIADRFYLGG 341
Query: 452 PTTLRGFQQRGVGPHSDGQATGGKVYWAAGAHVYAPLPFLRNKNGISSLFRSHFFVNAGC 273
PT++RGF +GP S+G GG+ YWA G H+Y PLPF + G LFR+HFF+NAG
Sbjct: 342 PTSIRGFSMHSIGPQSEGDYLGGEAYWAGGLHLYTPLPFRPGQGGFGELFRTHFFLNAGN 401
Query: 272 LAAPDNG----LTNWEWANSARVSCGAGVALRLGSVARLELNYCAPLKARTNDCTAHGLQ 105
L + G + A R S GAG+ LRLG++ARLELNYC P+ +T D G+Q
Sbjct: 402 LCNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCVPMGVQTGDRICDGVQ 461
Query: 104 FGLGVHFL 81
FG G+ FL
Sbjct: 462 FGAGIRFL 469
>AL035398-2|CAB51401.1| 469|Homo sapiens protein ( Human DNA
sequence from clone RP4-796I17 on chromosome
22q13.2-35.1.).
Length = 469
Score = 214 bits (522), Expect = 4e-55
Identities = 107/248 (43%), Positives = 150/248 (60%), Gaps = 7/248 (2%)
Frame = -1
Query: 803 TKHNLQWEGLVRETAAXSKTTSFKVRESSGPQMKSILRHIVTVDHRDDAIFPSQGSWVQF 624
T H ++WEG+ RE S+T SF VR+ SG +KS L H + +D R+ +I P +G+ ++
Sbjct: 222 TSHTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALLKV 281
Query: 623 SSELAGL-GGGVAHLKTELQAQQNYELIEDIVLQLAGAAGVLHDMFG--TEIPDHFFLGG 453
+ ELAG GG V+ +K + + Q N +LI D V + G+L + + I D F+LGG
Sbjct: 282 NQELAGYTGGDVSFIKEDFELQLNKQLIFDSVFSASFWGGMLVPIGDKPSSIADRFYLGG 341
Query: 452 PTTLRGFQQRGVGPHSDGQATGGKVYWAAGAHVYAPLPFLRNKNGISSLFRSHFFVNAGC 273
PT++RGF +GP S+G GG+ YWA G H+Y PLPF + G LFR+HFF+NAG
Sbjct: 342 PTSIRGFSMHSIGPQSEGDYLGGEAYWAGGLHLYTPLPFRPGQGGFGELFRTHFFLNAGN 401
Query: 272 LAAPDNG----LTNWEWANSARVSCGAGVALRLGSVARLELNYCAPLKARTNDCTAHGLQ 105
L + G + A R S GAG+ LRLG++ARLELNYC P+ +T D G+Q
Sbjct: 402 LCNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCVPMGVQTGDRICDGVQ 461
Query: 104 FGLGVHFL 81
FG G+ FL
Sbjct: 462 FGAGIRFL 469
>AK222657-1|BAD96377.1| 469|Homo sapiens CGI-51 protein variant
protein.
Length = 469
Score = 214 bits (522), Expect = 4e-55
Identities = 107/248 (43%), Positives = 150/248 (60%), Gaps = 7/248 (2%)
Frame = -1
Query: 803 TKHNLQWEGLVRETAAXSKTTSFKVRESSGPQMKSILRHIVTVDHRDDAIFPSQGSWVQF 624
T H ++WEG+ RE S+T SF VR+ SG +KS L H + +D R+ +I P +G+ ++
Sbjct: 222 TSHTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALLKV 281
Query: 623 SSELAGL-GGGVAHLKTELQAQQNYELIEDIVLQLAGAAGVLHDMFG--TEIPDHFFLGG 453
+ ELAG GG V+ +K + + Q N +LI D V + G+L + + I D F+LGG
Sbjct: 282 NQELAGYTGGDVSFIKEDFELQLNKQLIFDSVFSASFWGGMLVPIGDKPSSIADRFYLGG 341
Query: 452 PTTLRGFQQRGVGPHSDGQATGGKVYWAAGAHVYAPLPFLRNKNGISSLFRSHFFVNAGC 273
PT++RGF +GP S+G GG+ YWA G H+Y PLPF + G LFR+HFF+NAG
Sbjct: 342 PTSIRGFSMHSIGPQSEGDYLGGEAYWAGGLHLYTPLPFRPGQGGFGELFRTHFFLNAGN 401
Query: 272 LAAPDNG----LTNWEWANSARVSCGAGVALRLGSVARLELNYCAPLKARTNDCTAHGLQ 105
L + G + A R S GAG+ LRLG++ARLELNYC P+ +T D G+Q
Sbjct: 402 LCNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCVPMGVQTGDRICDGVQ 461
Query: 104 FGLGVHFL 81
FG G+ FL
Sbjct: 462 FGAGIRFL 469
>BC015200-1|AAH15200.1| 469|Homo sapiens sorting and assembly
machinery component 50 homolog (S. cerevisiae) protein.
Length = 469
Score = 213 bits (521), Expect = 5e-55
Identities = 107/248 (43%), Positives = 150/248 (60%), Gaps = 7/248 (2%)
Frame = -1
Query: 803 TKHNLQWEGLVRETAAXSKTTSFKVRESSGPQMKSILRHIVTVDHRDDAIFPSQGSWVQF 624
T H ++WEG+ RE S+T SF VR+ SG +KS L H + +D R+ +I P +G+ ++
Sbjct: 222 TSHTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALLKV 281
Query: 623 SSELAGL-GGGVAHLKTELQAQQNYELIEDIVLQLAGAAGVLHDMFG--TEIPDHFFLGG 453
+ ELAG GG V+ +K + + Q N +LI D V + G+L + + I D F+LGG
Sbjct: 282 NQELAGYTGGDVSFIKEDFELQLNKQLIFDSVFSASFWGGMLVPIGDKPSSIADRFYLGG 341
Query: 452 PTTLRGFQQRGVGPHSDGQATGGKVYWAAGAHVYAPLPFLRNKNGISSLFRSHFFVNAGC 273
PT++RGF +GP S+G GG+ YWA G H+Y PLPF + G LFR+HFF+NAG
Sbjct: 342 PTSVRGFSMHSIGPQSEGDYLGGEAYWAGGLHLYTPLPFRPGQGGFGELFRTHFFLNAGN 401
Query: 272 LAAPDNG----LTNWEWANSARVSCGAGVALRLGSVARLELNYCAPLKARTNDCTAHGLQ 105
L + G + A R S GAG+ LRLG++ARLELNYC P+ +T D G+Q
Sbjct: 402 LCNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCVPMGVQTGDRICDGVQ 461
Query: 104 FGLGVHFL 81
FG G+ FL
Sbjct: 462 FGAGIRFL 469
>BC011681-1|AAH11681.1| 469|Homo sapiens sorting and assembly
machinery component 50 homolog (S. cerevisiae) protein.
Length = 469
Score = 213 bits (521), Expect = 5e-55
Identities = 107/248 (43%), Positives = 150/248 (60%), Gaps = 7/248 (2%)
Frame = -1
Query: 803 TKHNLQWEGLVRETAAXSKTTSFKVRESSGPQMKSILRHIVTVDHRDDAIFPSQGSWVQF 624
T H ++WEG+ RE S+T SF VR+ SG +KS L H + +D R+ +I P +G+ ++
Sbjct: 222 TSHTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALLKV 281
Query: 623 SSELAGL-GGGVAHLKTELQAQQNYELIEDIVLQLAGAAGVLHDMFG--TEIPDHFFLGG 453
+ ELAG GG V+ +K + + Q N +LI D V + G+L + + I D F+LGG
Sbjct: 282 NQELAGYTGGDVSFIKEDFELQLNKQLIFDSVFSASFWGGMLVPIGDKPSSIADRFYLGG 341
Query: 452 PTTLRGFQQRGVGPHSDGQATGGKVYWAAGAHVYAPLPFLRNKNGISSLFRSHFFVNAGC 273
PT++RGF +GP S+G GG+ YWA G H+Y PLPF + G LFR+HFF+NAG
Sbjct: 342 PTSVRGFSMHSIGPQSEGDYLGGEAYWAGGLHLYTPLPFRPGQGGFGELFRTHFFLNAGN 401
Query: 272 LAAPDNG----LTNWEWANSARVSCGAGVALRLGSVARLELNYCAPLKARTNDCTAHGLQ 105
L + G + A R S GAG+ LRLG++ARLELNYC P+ +T D G+Q
Sbjct: 402 LCNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCVPMGVQTGDRICDGVQ 461
Query: 104 FGLGVHFL 81
FG G+ FL
Sbjct: 462 FGAGIRFL 469
>AK001087-1|BAA91498.1| 469|Homo sapiens protein ( Homo sapiens
cDNA FLJ10225 fis, clone HEMBB1000036. ).
Length = 469
Score = 213 bits (521), Expect = 5e-55
Identities = 107/248 (43%), Positives = 150/248 (60%), Gaps = 7/248 (2%)
Frame = -1
Query: 803 TKHNLQWEGLVRETAAXSKTTSFKVRESSGPQMKSILRHIVTVDHRDDAIFPSQGSWVQF 624
T H ++WEG+ RE S+T SF VR+ SG +KS L H + +D R+ +I P +G+ ++
Sbjct: 222 TSHTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALLKV 281
Query: 623 SSELAGL-GGGVAHLKTELQAQQNYELIEDIVLQLAGAAGVLHDMFG--TEIPDHFFLGG 453
+ ELAG GG V+ +K + + Q N +LI D V + G+L + + I D F+LGG
Sbjct: 282 NQELAGYTGGDVSFIKEDFELQLNKQLIFDSVFSASFWGGMLVPIGDKPSSIADRFYLGG 341
Query: 452 PTTLRGFQQRGVGPHSDGQATGGKVYWAAGAHVYAPLPFLRNKNGISSLFRSHFFVNAGC 273
PT++RGF +GP S+G GG+ YWA G H+Y PLPF + G LFR+HFF+NAG
Sbjct: 342 PTSVRGFSMHSIGPQSEGDYLGGEAYWAGGLHLYTPLPFRPGQGGFGELFRTHFFLNAGN 401
Query: 272 LAAPDNG----LTNWEWANSARVSCGAGVALRLGSVARLELNYCAPLKARTNDCTAHGLQ 105
L + G + A R S GAG+ LRLG++ARLELNYC P+ +T D G+Q
Sbjct: 402 LCNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCVPMGVQTGDRICDGVQ 461
Query: 104 FGLGVHFL 81
FG G+ FL
Sbjct: 462 FGAGIRFL 469
>BC007830-1|AAH07830.1| 468|Homo sapiens sorting and assembly
machinery component 50 homolog (S. cerevisiae) protein.
Length = 468
Score = 209 bits (510), Expect = 1e-53
Identities = 107/248 (43%), Positives = 150/248 (60%), Gaps = 7/248 (2%)
Frame = -1
Query: 803 TKHNLQWEGLVRETAAXSKTTSFKVRESSGPQMKSILRHIVTVDHRDDAIFPSQGSWVQF 624
T H ++WEG+ RE S+T SF VR+ SG +KS L H + +D R+ +I P +G+ ++
Sbjct: 222 TSHTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALLKV 281
Query: 623 SSELAG-LGGGVAHLKTELQAQQNYELIEDIVLQLAGAAGVLHDMFG--TEIPDHFFLGG 453
+ ELAG GG V+ +K + + Q N +LI D V + G+L + + I D F+LGG
Sbjct: 282 NQELAGYTGGDVSFIKEDFELQLNKQLIFDSVFSASFWGGMLVPIGDKPSSIADRFYLGG 341
Query: 452 PTTLRGFQQRGVGPHSDGQATGGKVYWAAGAHVYAPLPFLRNKNGISSLFRSHFFVNAGC 273
PT++RGF +GP S+G GG+ YW AG H+Y PLPF + G LFR+HFF+NAG
Sbjct: 342 PTSVRGFSMHSIGPQSEGDYLGGEAYW-AGLHLYTPLPFRPGQGGFGELFRTHFFLNAGN 400
Query: 272 LAAPDNG----LTNWEWANSARVSCGAGVALRLGSVARLELNYCAPLKARTNDCTAHGLQ 105
L + G + A R S GAG+ LRLG++ARLELNYC P+ +T D G+Q
Sbjct: 401 LCNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCVPMGVQTGDRICDGVQ 460
Query: 104 FGLGVHFL 81
FG G+ FL
Sbjct: 461 FGAGIRFL 468
>AF151809-1|AAD34046.1| 469|Homo sapiens CGI-51 protein protein.
Length = 469
Score = 202 bits (494), Expect = 9e-52
Identities = 104/248 (41%), Positives = 147/248 (59%), Gaps = 7/248 (2%)
Frame = -1
Query: 803 TKHNLQWEGLVRETAAXSKTTSFKVRESSGPQMKSILRHIVTVDHRDDAIFPSQGSWVQF 624
T H ++WEG+ RE S+T SF VR+ SG +KS L H + +D R+ +I P +G+ ++
Sbjct: 222 TSHTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALLKV 281
Query: 623 SSELAGL-GGGVAHLKTELQAQQNYELIEDIVLQLAGAAGVLHDMFG--TEIPDHFFLGG 453
+ ELAG GG V+ +K + + Q N +LI D V + G+L + + I D F+LGG
Sbjct: 282 NQELAGYTGGDVSFIKEDFELQLNKQLIFDSVFSASFWGGMLVPIGDKPSSIADRFYLGG 341
Query: 452 PTTLRGFQQRGVGPHSDGQATGGKVYWAAGAHVYAPLPFLRNKNGISSLFRSHFFVNAGC 273
PT++RGF +GP S+G GG+ Y H+Y PLPF + G LFR+HFF+NAG
Sbjct: 342 PTSIRGFSMHSIGPQSEGDYLGGEAYLGRRWHLYTPLPFRPGQGGFGELFRTHFFLNAGN 401
Query: 272 LAAPDNG----LTNWEWANSARVSCGAGVALRLGSVARLELNYCAPLKARTNDCTAHGLQ 105
L + G + A R S GAG+ LRLG++ARLELNYC P+ +T D G+Q
Sbjct: 402 LCNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCVPMGVQTGDRICDGVQ 461
Query: 104 FGLGVHFL 81
FG G+ FL
Sbjct: 462 FGAGIRFL 469
>Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein.
Length = 4684
Score = 35.1 bits (77), Expect = 0.31
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 72 NFLQEVHSEPE-LEAVRGAVVGPGLQRRAVVQLEPRHAAQPQR 197
+ LQ+ E E L +G + G + +AVVQL+PRH A P R
Sbjct: 899 DLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKPRHPAHPMR 941
>U63610-1|AAB05428.1| 4574|Homo sapiens plectin protein.
Length = 4574
Score = 35.1 bits (77), Expect = 0.31
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 72 NFLQEVHSEPE-LEAVRGAVVGPGLQRRAVVQLEPRHAAQPQR 197
+ LQ+ E E L +G + G + +AVVQL+PRH A P R
Sbjct: 789 DLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKPRHPAHPMR 831
>U53204-1|AAB05427.1| 4574|Homo sapiens plectin protein.
Length = 4574
Score = 35.1 bits (77), Expect = 0.31
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 72 NFLQEVHSEPE-LEAVRGAVVGPGLQRRAVVQLEPRHAAQPQR 197
+ LQ+ E E L +G + G + +AVVQL+PRH A P R
Sbjct: 789 DLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKPRHPAHPMR 831
>AY480051-1|AAR95684.1| 4547|Homo sapiens plectin 11 protein.
Length = 4547
Score = 35.1 bits (77), Expect = 0.31
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 72 NFLQEVHSEPE-LEAVRGAVVGPGLQRRAVVQLEPRHAAQPQR 197
+ LQ+ E E L +G + G + +AVVQL+PRH A P R
Sbjct: 762 DLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKPRHPAHPMR 804
>AY480050-1|AAR95683.1| 4551|Homo sapiens plectin 10 protein.
Length = 4551
Score = 35.1 bits (77), Expect = 0.31
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 72 NFLQEVHSEPE-LEAVRGAVVGPGLQRRAVVQLEPRHAAQPQR 197
+ LQ+ E E L +G + G + +AVVQL+PRH A P R
Sbjct: 766 DLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKPRHPAHPMR 808
>AY480049-1|AAR95682.1| 4547|Homo sapiens plectin 8 protein.
Length = 4547
Score = 35.1 bits (77), Expect = 0.31
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 72 NFLQEVHSEPE-LEAVRGAVVGPGLQRRAVVQLEPRHAAQPQR 197
+ LQ+ E E L +G + G + +AVVQL+PRH A P R
Sbjct: 762 DLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKPRHPAHPMR 804
>AY480048-1|AAR95681.1| 4515|Homo sapiens plectin 7 protein.
Length = 4515
Score = 35.1 bits (77), Expect = 0.31
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 72 NFLQEVHSEPE-LEAVRGAVVGPGLQRRAVVQLEPRHAAQPQR 197
+ LQ+ E E L +G + G + +AVVQL+PRH A P R
Sbjct: 730 DLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKPRHPAHPMR 772
>AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein.
Length = 4684
Score = 35.1 bits (77), Expect = 0.31
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 72 NFLQEVHSEPE-LEAVRGAVVGPGLQRRAVVQLEPRHAAQPQR 197
+ LQ+ E E L +G + G + +AVVQL+PRH A P R
Sbjct: 899 DLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKPRHPAHPMR 941
>AY480046-1|AAR95679.1| 4525|Homo sapiens plectin 3 protein.
Length = 4525
Score = 35.1 bits (77), Expect = 0.31
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 72 NFLQEVHSEPE-LEAVRGAVVGPGLQRRAVVQLEPRHAAQPQR 197
+ LQ+ E E L +G + G + +AVVQL+PRH A P R
Sbjct: 740 DLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKPRHPAHPMR 782
>AY480045-1|AAR95678.1| 4533|Homo sapiens plectin 2 protein.
Length = 4533
Score = 35.1 bits (77), Expect = 0.31
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 72 NFLQEVHSEPE-LEAVRGAVVGPGLQRRAVVQLEPRHAAQPQR 197
+ LQ+ E E L +G + G + +AVVQL+PRH A P R
Sbjct: 748 DLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKPRHPAHPMR 790
>AY480044-1|AAR95677.1| 4574|Homo sapiens plectin 1 protein.
Length = 4574
Score = 35.1 bits (77), Expect = 0.31
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 72 NFLQEVHSEPE-LEAVRGAVVGPGLQRRAVVQLEPRHAAQPQR 197
+ LQ+ E E L +G + G + +AVVQL+PRH A P R
Sbjct: 789 DLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKPRHPAHPMR 831
>Y13374-1|CAA73804.1| 209|Homo sapiens putative prenylated protein
protein.
Length = 209
Score = 33.9 bits (74), Expect = 0.71
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 382 FPPVACPSECGPTPRCWKPLSVVGPPRKK*SGISVPNMSCRTPAAPASCNTMSSINS*FC 561
+PP P P+ R PL PPR P SC P + C+ S+ S C
Sbjct: 28 WPPPGSPP--APSLRASLPLE---PPR-------CPLRSCSLPRSACLCSRNSAPGS--C 73
Query: 562 CA-WSSVLRWATPPPNPAS 615
C W+S+ W+ PPP+P+S
Sbjct: 74 CRPWASL--WSEPPPSPSS 90
>D88756-1|BAB46920.1| 209|Homo sapiens cerebral protein-5 protein.
Length = 209
Score = 33.9 bits (74), Expect = 0.71
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 382 FPPVACPSECGPTPRCWKPLSVVGPPRKK*SGISVPNMSCRTPAAPASCNTMSSINS*FC 561
+PP P P+ R PL PPR P SC P + C+ S+ S C
Sbjct: 28 WPPPGSPP--APSLRASLPLE---PPR-------CPLRSCSLPRSACLCSRNSAPGS--C 73
Query: 562 CA-WSSVLRWATPPPNPAS 615
C W+S+ W+ PPP+P+S
Sbjct: 74 CRPWASL--WSEPPPSPSS 90
>CR456853-1|CAG33134.1| 209|Homo sapiens CXX1 protein.
Length = 209
Score = 33.9 bits (74), Expect = 0.71
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 382 FPPVACPSECGPTPRCWKPLSVVGPPRKK*SGISVPNMSCRTPAAPASCNTMSSINS*FC 561
+PP P P+ R PL PPR P SC P + C+ S+ S C
Sbjct: 28 WPPPGSPP--APSLRASLPLE---PPR-------CPLRSCSLPRSACLCSRNSAPGS--C 73
Query: 562 CA-WSSVLRWATPPPNPAS 615
C W+S+ W+ PPP+P+S
Sbjct: 74 CRPWASL--WSEPPPSPSS 90
>BC002410-1|AAH02410.3| 209|Homo sapiens family with sequence
similarity 127, member A protein.
Length = 209
Score = 33.9 bits (74), Expect = 0.71
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 382 FPPVACPSECGPTPRCWKPLSVVGPPRKK*SGISVPNMSCRTPAAPASCNTMSSINS*FC 561
+PP P P+ R PL PPR P SC P + C+ S+ S C
Sbjct: 28 WPPPGSPP--APSLRASLPLE---PPR-------CPLRSCSLPRSACLCSRNSAPGS--C 73
Query: 562 CA-WSSVLRWATPPPNPAS 615
C W+S+ W+ PPP+P+S
Sbjct: 74 CRPWASL--WSEPPPSPSS 90
>BC002385-1|AAH02385.3| 209|Homo sapiens family with sequence
similarity 127, member A protein.
Length = 209
Score = 33.9 bits (74), Expect = 0.71
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 382 FPPVACPSECGPTPRCWKPLSVVGPPRKK*SGISVPNMSCRTPAAPASCNTMSSINS*FC 561
+PP P P+ R PL PPR P SC P + C+ S+ S C
Sbjct: 28 WPPPGSPP--APSLRASLPLE---PPR-------CPLRSCSLPRSACLCSRNSAPGS--C 73
Query: 562 CA-WSSVLRWATPPPNPAS 615
C W+S+ W+ PPP+P+S
Sbjct: 74 CRPWASL--WSEPPPSPSS 90
>AF052096-1|AAC28618.1| 209|Homo sapiens putative prenylated
protein protein.
Length = 209
Score = 33.9 bits (74), Expect = 0.71
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 382 FPPVACPSECGPTPRCWKPLSVVGPPRKK*SGISVPNMSCRTPAAPASCNTMSSINS*FC 561
+PP P P+ R PL PPR P SC P + C+ S+ S C
Sbjct: 28 WPPPGSPP--APSLRASLPLE---PPR-------CPLRSCSLPRSACLCSRNSAPGS--C 73
Query: 562 CA-WSSVLRWATPPPNPAS 615
C W+S+ W+ PPP+P+S
Sbjct: 74 CRPWASL--WSEPPPSPSS 90
>AF038168-1|AAB97361.1| 209|Homo sapiens putative prenylated
protein protein.
Length = 209
Score = 33.9 bits (74), Expect = 0.71
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 382 FPPVACPSECGPTPRCWKPLSVVGPPRKK*SGISVPNMSCRTPAAPASCNTMSSINS*FC 561
+PP P P+ R PL PPR P SC P + C+ S+ S C
Sbjct: 28 WPPPGSPP--APSLRASLPLE---PPR-------CPLRSCSLPRSACLCSRNSAPGS--C 73
Query: 562 CA-WSSVLRWATPPPNPAS 615
C W+S+ W+ PPP+P+S
Sbjct: 74 CRPWASL--WSEPPPSPSS 90
>BC111771-1|AAI11772.1| 838|Homo sapiens transforming, acidic
coiled-coil containing protein 3 protein.
Length = 838
Score = 32.7 bits (71), Expect = 1.6
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +1
Query: 358 CAPAAQYTFPPVACPSE-CGPTPRCWKPLSVVGPPRKK*SGI---SVPNMSCRTPAAPAS 525
CAPAA T PP A P E CG P P +G P + + S ++C +AP S
Sbjct: 242 CAPAAVATSPPGAIPKEACGGAPLQGLPGEALGYPAGVGTPVPADSTQTLTCAHTSAPES 301
>AJ243997-1|CAB53009.1| 838|Homo sapiens ERIC1 protein.
Length = 838
Score = 32.7 bits (71), Expect = 1.6
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +1
Query: 358 CAPAAQYTFPPVACPSE-CGPTPRCWKPLSVVGPPRKK*SGI---SVPNMSCRTPAAPAS 525
CAPAA T PP A P E CG P P +G P + + S ++C +AP S
Sbjct: 242 CAPAAVATSPPGAIPKEACGGAPLQGLPGEALGYPAGVGTPVPADSTQTLTCAHTSAPES 301
>BC106071-1|AAI06072.1| 838|Homo sapiens transforming, acidic
coiled-coil containing protein 3 protein.
Length = 838
Score = 31.5 bits (68), Expect = 3.8
Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Frame = +1
Query: 358 CAPAAQYTFPPVACPSE-CGPTPRCWKPLSVVGPPRKK*SGISVP-----NMSCRTPAAP 519
CAPAA T PP A P E CG P P +G P G VP ++C +AP
Sbjct: 242 CAPAAVATSPPGAIPKEACGGAPLQGLPGEALGCPAG--VGTPVPADGTQTLTCAHTSAP 299
Query: 520 AS 525
S
Sbjct: 300 ES 301
>AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein
protein.
Length = 2701
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 184 PSRSATPAPHDTRAEFAHSQFVKPLSGAARQPAFTKKCDRNRD 312
P +S P P D H QF+ P++ R P F +K D R+
Sbjct: 1377 PRQSEVPKPEDGEPPRRHEQFI-PIAADKRPPKFERKFDPARE 1418
>AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated protein
2 protein.
Length = 2701
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 184 PSRSATPAPHDTRAEFAHSQFVKPLSGAARQPAFTKKCDRNRD 312
P +S P P D H QF+ P++ R P F +K D R+
Sbjct: 1377 PRQSEVPKPEDGEPPRRHEQFI-PIAADKRPPKFERKFDPARE 1418
>AF093543-1|AAD25964.1| 838|Homo sapiens transforming acidic
coiled-coil containing protein 3 protein.
Length = 838
Score = 31.5 bits (68), Expect = 3.8
Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Frame = +1
Query: 358 CAPAAQYTFPPVACPSE-CGPTPRCWKPLSVVGPPRKK*SGISVP-----NMSCRTPAAP 519
CAPAA T PP A P E CG P P +G P G VP ++C +AP
Sbjct: 242 CAPAAVATSPPGAIPKEACGGAPLQGLPGEALGCPAG--VGTPVPADGTQTLTCAHTSAP 299
Query: 520 AS 525
S
Sbjct: 300 ES 301
>AB029019-1|BAA83048.2| 1919|Homo sapiens KIAA1096 protein protein.
Length = 1919
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 184 PSRSATPAPHDTRAEFAHSQFVKPLSGAARQPAFTKKCDRNRD 312
P +S P P D H QF+ P++ R P F +K D R+
Sbjct: 447 PRQSEVPKPEDGEPPRRHEQFI-PIAADKRPPKFERKFDPARE 488
>AJ311904-1|CAC84565.1| 1207|Homo sapiens ADAMTS-19 protein.
Length = 1207
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -3
Query: 390 WWKGILGGGCARVRAAALPSEQKRDFVPVPV 298
W +G+ GGG AR +AA S + R PVP+
Sbjct: 62 WVRGVGGGGSARAQAAG-SSREVRSVAPVPL 91
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,615,214
Number of Sequences: 237096
Number of extensions: 2549316
Number of successful extensions: 7070
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 6409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7035
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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