Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte11j08
(813 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456355-1|CAG30241.1| 276|Homo sapiens Em:AC006547.3 protein. 95 4e-19
BC041339-1|AAH41339.1| 276|Homo sapiens chromosome 22 open read... 93 1e-18
AK057461-1|BAB71498.1| 273|Homo sapiens protein ( Homo sapiens ... 85 2e-16
AK092484-1|BAC03902.1| 214|Homo sapiens protein ( Homo sapiens ... 50 1e-05
BC044216-1|AAH44216.2| 488|Homo sapiens BAG5 protein protein. 31 6.5
AB020680-1|BAA74896.1| 466|Homo sapiens KIAA0873 protein protein. 31 6.5
BC050551-1|AAH50551.1| 447|Homo sapiens BCL2-associated athanog... 30 8.7
AF095195-1|AAD16124.2| 447|Homo sapiens BAG-family molecular ch... 30 8.7
>CR456355-1|CAG30241.1| 276|Homo sapiens Em:AC006547.3 protein.
Length = 276
Score = 94.7 bits (225), Expect = 4e-19
Identities = 77/260 (29%), Positives = 116/260 (44%), Gaps = 5/260 (1%)
Frame = -1
Query: 780 YSLIVATNRDEFYDRPSAELAPWKDNPNIIXXXXXXXXXXXGTWLAVSPLRKKMGVLLN- 604
Y LI+A NRDEFY RPS W +N I+ GTWL +S R K+ L N
Sbjct: 18 YRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGTWLGIS-TRGKLAALTNY 76
Query: 603 LPNTPKKNAKSRGKIVAEFVKSKNEAASYVQEMKSYFEECNNFIFVAMDFGNTT-PVINS 427
L A+ RG++V F+ + ++ SY++++ N F +A D VI
Sbjct: 77 LQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFNLIAADLSTAKGDVICY 136
Query: 426 FTNVTNSITTHTDP-CLGFGNSLPDMPLKKVEAGLTKMHDICKGLNKISMKSKLLEELTA 250
+ N P G N+L + P +K+ G + + + K L+ L
Sbjct: 137 YGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVERSQALP-KDVLIASLLD 195
Query: 249 LLKCNERHLPDAQLQERRPNLYEELSSIF--VCVPEERYGTRAQTILLLTKTGHLEVHEI 76
+L E LPD ++++ + + S + VCV YGTR TI+L+ GH+ E
Sbjct: 196 VLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNTIILVDADGHVTFTER 255
Query: 75 SMKSPIDKIEPKWEKHKYQF 16
SM +DK WE Y+F
Sbjct: 256 SM---MDKDLSHWETRTYEF 272
>BC041339-1|AAH41339.1| 276|Homo sapiens chromosome 22 open reading
frame 25 protein.
Length = 276
Score = 92.7 bits (220), Expect = 1e-18
Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 5/260 (1%)
Frame = -1
Query: 780 YSLIVATNRDEFYDRPSAELAPWKDNPNIIXXXXXXXXXXXGTWLAVSPLRKKMGVLLN- 604
Y LI+A NRDEFY RPS W +N I+ GTWL +S R K+ L N
Sbjct: 18 YRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGTWLGIS-TRGKLAALTNY 76
Query: 603 LPNTPKKNAKSRGKIVAEFVKSKNEAASYVQEMKSYFEECNNFIFVAMDFGNTT-PVINS 427
L A+ RG++V F+ + ++ SY++++ N F +A + VI
Sbjct: 77 LQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFNLIAANLSTAKGDVICY 136
Query: 426 FTNVTNSITTHTDP-CLGFGNSLPDMPLKKVEAGLTKMHDICKGLNKISMKSKLLEELTA 250
+ N P G N+L + P +K+ G + + + K L+ L
Sbjct: 137 YGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLFLEAVERSQALP-KDVLIASLLD 195
Query: 249 LLKCNERHLPDAQLQERRPNLYEELSSIF--VCVPEERYGTRAQTILLLTKTGHLEVHEI 76
+L E LPD ++++ + + S + VCV YGTR TI+L+ GH+ E
Sbjct: 196 VLNNKEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNTIILVDADGHVTFTER 255
Query: 75 SMKSPIDKIEPKWEKHKYQF 16
SM +DK WE Y+F
Sbjct: 256 SM---MDKDLSHWETRTYEF 272
>AK057461-1|BAB71498.1| 273|Homo sapiens protein ( Homo sapiens
cDNA FLJ32899 fis, clone TESTI2005408, highly similar to
SER/THR-RICH PROTEIN T10 IN DGCR REGION. ).
Length = 273
Score = 85.4 bits (202), Expect = 2e-16
Identities = 75/263 (28%), Positives = 115/263 (43%), Gaps = 5/263 (1%)
Frame = -1
Query: 789 DSDYSLIVATNRDEFYDRPSAELAPWKDNPNIIXXXXXXXXXXXGTWLAVSPLRKKMGVL 610
+ + LI+A NRDEFY RPS W +N I+ GTWL +S R K+ L
Sbjct: 20 EGSHRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGTWLGIS-TRGKLAAL 78
Query: 609 LN-LPNTPKKNAKSRGKIVAEFVKSKNEAASYVQEMKSYFEECNNFIFVAMDFGNTT-PV 436
N L A+ RG++V F+ + ++ SY++++ N F +A D V
Sbjct: 79 TNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFNLIAADLSTAKGDV 138
Query: 435 INSFTNVTNSITTHTDP-CLGFGNSLPDMPLKKVEAGLTKMHDICKGLNKISMKSKLLEE 259
I + N P G N+L + P +K+ G L + L ++
Sbjct: 139 ICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCFGKQLF------LEAVERSQALPKD 192
Query: 258 LTALLKCNERHLPDAQLQERRPNLYEELSSIF--VCVPEERYGTRAQTILLLTKTGHLEV 85
+L E LPD ++++ + + S + VCV YGTR TI+L+ GH+
Sbjct: 193 ---VLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTNTIILVDADGHVTF 249
Query: 84 HEISMKSPIDKIEPKWEKHKYQF 16
E SM +DK WE Y+F
Sbjct: 250 TERSM---MDKDLSHWETRTYEF 269
>AK092484-1|BAC03902.1| 214|Homo sapiens protein ( Homo sapiens
cDNA FLJ35165 fis, clone PLACE6012028, highly similar to
SER/THR-RICH PROTEIN T10 IN DGCR REGION. ).
Length = 214
Score = 49.6 bits (113), Expect = 1e-05
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Frame = -1
Query: 378 GFGNSLPDMPLKKVEAGLTKMHDICKGLNKISMKSKLLEELTALLKCNERHLPDAQLQER 199
G N+L + P +K+ G + + + K L+ L +L E LPD ++++
Sbjct: 92 GLSNALLETPWRKLCFGKQLFLEAVERSQALP-KDVLIASLLDVLNNEEAQLPDPAIEDQ 150
Query: 198 RPNLYEELSSIF--VCVPEERYGTRAQTILLLTKTGHLEVHEISMKSPIDKIEPKWEKHK 25
+ + S + VCV YGTR TI+L+ GH+ E SM +DK WE
Sbjct: 151 GGEYVQPMLSKYAAVCVRCPGYGTRTNTIILVDADGHVTFTERSM---MDKDLSHWETRT 207
Query: 24 YQF 16
Y+F
Sbjct: 208 YEF 210
Score = 46.4 bits (105), Expect = 1e-04
Identities = 28/73 (38%), Positives = 38/73 (52%)
Frame = -1
Query: 780 YSLIVATNRDEFYDRPSAELAPWKDNPNIIXXXXXXXXXXXGTWLAVSPLRKKMGVLLNL 601
Y LI+A NRDEFY RPS W +N I+ GTWL +S R K+ L N
Sbjct: 18 YRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGTWLGIS-TRGKLAALTNY 76
Query: 600 PNTPKKNAKSRGK 562
P+ + ++RG+
Sbjct: 77 LQ-PQLDWQARGR 88
>BC044216-1|AAH44216.2| 488|Homo sapiens BAG5 protein protein.
Length = 488
Score = 30.7 bits (66), Expect = 6.5
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Frame = -1
Query: 465 AMDFGNTTPVINSFTNVTNSITTHTDPCLGFGNSLPDMPLKKVEAGLTK-MHDI----CK 301
+MD GN P I+ + + + +GF D KK+E LTK + +I +
Sbjct: 41 SMDMGNQHPSISRLQEIQKEVKSVEQQVIGFSGLSDDKNYKKLERILTKQLFEIDSVDTE 100
Query: 300 GLNKISM-KSKLLEELTALLKCNERHLPDAQLQERRPNLYEELSSI 166
G I + + +E LLK E++ E + N++EE S+
Sbjct: 101 GKGDIQQARKRAAQETERLLKELEQNANHPHRIEIQ-NIFEEAQSL 145
>AB020680-1|BAA74896.1| 466|Homo sapiens KIAA0873 protein protein.
Length = 466
Score = 30.7 bits (66), Expect = 6.5
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Frame = -1
Query: 465 AMDFGNTTPVINSFTNVTNSITTHTDPCLGFGNSLPDMPLKKVEAGLTK-MHDI----CK 301
+MD GN P I+ + + + +GF D KK+E LTK + +I +
Sbjct: 19 SMDMGNQHPSISRLQEIQKEVKSVEQQVIGFSGLSDDKNYKKLERILTKQLFEIDSVDTE 78
Query: 300 GLNKISM-KSKLLEELTALLKCNERHLPDAQLQERRPNLYEELSSI 166
G I + + +E LLK E++ E + N++EE S+
Sbjct: 79 GKGDIQQARKRAAQETERLLKELEQNANHPHRIEIQ-NIFEEAQSL 123
>BC050551-1|AAH50551.1| 447|Homo sapiens BCL2-associated athanogene
5 protein.
Length = 447
Score = 30.3 bits (65), Expect = 8.7
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Frame = -1
Query: 462 MDFGNTTPVINSFTNVTNSITTHTDPCLGFGNSLPDMPLKKVEAGLTK-MHDI----CKG 298
MD GN P I+ + + + +GF D KK+E LTK + +I +G
Sbjct: 1 MDMGNQHPSISRLQEIQKEVKSVEQQVIGFSGLSDDKNYKKLERILTKQLFEIDSVDTEG 60
Query: 297 LNKISM-KSKLLEELTALLKCNERHLPDAQLQERRPNLYEELSSI 166
I + + +E LLK E++ E + N++EE S+
Sbjct: 61 KGDIQQARKRAAQETERLLKELEQNANHPHRIEIQ-NIFEEAQSL 104
>AF095195-1|AAD16124.2| 447|Homo sapiens BAG-family molecular
chaperone regulator-5 protein.
Length = 447
Score = 30.3 bits (65), Expect = 8.7
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Frame = -1
Query: 462 MDFGNTTPVINSFTNVTNSITTHTDPCLGFGNSLPDMPLKKVEAGLTK-MHDI----CKG 298
MD GN P I+ + + + +GF D KK+E LTK + +I +G
Sbjct: 1 MDMGNQHPSISRLQEIQKEVKSVEQQVIGFSGLSDDKNYKKLERILTKQLFEIDSVDTEG 60
Query: 297 LNKISM-KSKLLEELTALLKCNERHLPDAQLQERRPNLYEELSSI 166
I + + +E LLK E++ E + N++EE S+
Sbjct: 61 KGDIQQARKRAAQETERLLKELEQNANHPHRIEIQ-NIFEEAQSL 104
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,439,416
Number of Sequences: 237096
Number of extensions: 2445864
Number of successful extensions: 4880
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4877
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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